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| author | Ricardo Wurmus <rekado@elephly.net> | 2023-01-03 15:41:19 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-01-03 15:43:25 +0100 |
| commit | cad1789b3ea7317fd41a6a26c633a0ee88fe7a81 (patch) | |
| tree | 63d8006052ef9295e323542e10b9470adb24b7e8 | |
| parent | 71ee1fbbed8ea9788dd48a634653d66606d372ce (diff) | |
gnu: Add python-bcbio-gff.
* gnu/packages/bioinformatics.scm (python-bcbio-gff): New variable.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 20 |
1 files changed, 20 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 46febf579a..a92589eef7 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -907,6 +907,26 @@ input/output delimiter. When the new functionality is not used, bioawk is intended to behave exactly the same as the original BWK awk.") (license license:x11))) +(define-public python-bcbio-gff + (package + (name "python-bcbio-gff") + (version "0.6.9") + (source (origin + (method url-fetch) + (uri (pypi-uri "bcbio-gff" version)) + (sha256 + (base32 + "1pm1szyxabhn8jismrj9cjhf88ajgcmm39f0cgf36iagw5qakprl")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-biopython python-six)) + (native-inputs (list python-pytest)) + (home-page "https://github.com/chapmanb/bcbb/tree/master/gff") + (synopsis "Read and write GFF files with Biopython integration") + (description + "This package lets you read and write files in Generic Feature +Format (GFF) with Biopython integration.") + (license (license:non-copyleft "http://www.biopython.org/DIST/LICENSE")))) + (define-public python-cellbender (package (name "python-cellbender") |