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authorRicardo Wurmus <rekado@elephly.net>2024-01-19 23:47:54 +0100
committerRicardo Wurmus <rekado@elephly.net>2024-01-19 23:55:43 +0100
commit74ce9d7e3b0c94b8a5ba1c6159ba15c5787e2094 (patch)
tree00b6d5b668c76833edf8d9a2caea645b09e75def
parent1d56a2450964a6681f07596feb674d661509e334 (diff)
gnu: Add r-trna.
* gnu/packages/bioconductor.scm (r-trna): New variable. Change-Id: Ifce902910fa75ddc471d8a25cc974307c19fd1d0
-rw-r--r--gnu/packages/bioconductor.scm37
1 files changed, 37 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index b1cd1f22cd..80b31e5f17 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -11249,6 +11249,43 @@ includes a function to create a cluster-level minimum spanning tree and data
structures to hold pseudotime inference results.")
(license license:gpl3)))
+(define-public r-trna
+ (package
+ (name "r-trna")
+ (version "1.20.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "tRNA" version))
+ (sha256
+ (base32
+ "0mcpql3zf1gw2k6gfyqycycc8li00818gd9qzs8s3wva7kxbpn89"))))
+ (properties
+ `((upstream-name . "tRNA")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biocgenerics
+ r-biostrings
+ r-genomicranges
+ r-ggplot2
+ r-iranges
+ r-modstrings
+ r-s4vectors
+ r-scales
+ r-stringr
+ r-structstrings
+ r-xvector))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/tRNA")
+ (synopsis "Analyzing tRNA sequences and structures")
+ (description
+ "The tRNA package allows tRNA sequences and structures to be accessed and
+used for subsetting. In addition, it provides visualization tools to compare
+feature parameters of multiple tRNA sets and correlate them to additional
+data. The tRNA package uses GRanges objects as inputs requiring only few
+additional column data sets.")
+ (license license:gpl3)))
+
(define-public r-scds
(package
(name "r-scds")