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authorRicardo Wurmus <rekado@elephly.net>2019-03-25 13:40:45 +0100
committerRicardo Wurmus <rekado@elephly.net>2019-03-25 14:00:32 +0100
commitd4a255a48451f1899a0ebd1d17db0d200a3704b4 (patch)
tree4c62b42729e2127ea62e70f4e5429f5b1df51062
parent73fcd222447f602d2e31325695376002c41ed2e7 (diff)
gnu: Add r-dlmap.
* gnu/packages/cran.scm (r-dlmap): New variable.
-rw-r--r--gnu/packages/cran.scm31
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index dda2a3e1b2..b6fe53998b 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -12548,3 +12548,34 @@ by regression methods with response IBD sharing for relative pairs. Account
for correlations of IBD statistics and covariates for relative pairs within
the same pedigree.")
(license license:gpl2+)))
+
+(define-public r-dlmap
+ (package
+ (name "r-dlmap")
+ (version "1.13")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "dlmap" version))
+ (sha256
+ (base32
+ "0s6wlkggkm3qndwyvw72xv1n0mcjb7ss3ajbq2ll6rv30splq0db"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-ibdreg" ,r-ibdreg)
+ ("r-mgcv" ,r-mgcv)
+ ("r-nlme" ,r-nlme)
+ ("r-qtl" ,r-qtl)
+ ("r-wgaim" ,r-wgaim)))
+ (home-page "https://cran.r-project.org/web/packages/dlmap/")
+ (synopsis "Detection localization mapping for QTL")
+ (description
+ "This is package for QTL mapping in a mixed model framework with separate
+detection and localization stages. The first stage detects the number of QTL
+on each chromosome based on the genetic variation due to grouped markers on
+the chromosome; the second stage uses this information to determine the most
+likely QTL positions. The mixed model can accommodate general fixed and
+random effects, including spatial effects in field trials and pedigree
+effects. It is applicable to backcrosses, doubled haploids, recombinant
+inbred lines, F2 intercrosses, and association mapping populations.")
+ (license license:gpl2)))