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authorAfkhami, Navid <Navid.Afkhami@mdc-berlin.de>2023-10-13 12:12:09 +0000
committerRicardo Wurmus <rekado@elephly.net>2023-10-13 14:42:16 +0200
commit21b44bbc7c7b36eaaf19eb2f92ce654a44b70302 (patch)
tree29fc0502fe96efd249ee39dc8d761bdab9d18662
parent4ec6fd7817ec4073547fd71309374a293d7c436c (diff)
gnu: Add r-mafh5-gnomad-v3-1-2-grch38.
* gnu/packages/bioconductor.scm (r-mafh5-gnomad-v3-1-2-grch38): New variable. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
-rw-r--r--gnu/packages/bioconductor.scm30
1 files changed, 30 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index f6946b72c8..d3ff0b1127 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -68,6 +68,36 @@
;;; Annotations
+(define-public r-mafh5-gnomad-v3-1-2-grch38
+ (package
+ (name "r-mafh5-gnomad-v3-1-2-grch38")
+ (version "3.15.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "MafH5.gnomAD.v3.1.2.GRCh38" version
+ 'annotation))
+ (sha256
+ (base32 "18hzw7f41ii16qpm3ch516b773900l1m1id5z6a763m01fg0mhiq"))))
+ (properties `((upstream-name . "MafH5.gnomAD.v3.1.2.GRCh38")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-bsgenome
+ r-genomeinfodb
+ r-genomicranges
+ r-genomicscores
+ r-hdf5array
+ r-iranges
+ r-rhdf5
+ r-s4vectors))
+ (home-page "https://bioconductor.org/packages/MafH5.gnomAD.v3.1.2.GRCh38")
+ (synopsis
+ "Minor allele frequency data from gnomAD version 3.1.2 for GRCh38")
+ (description
+ "This package is designed to store minor allele frequency data.
+It retrieves this data from the Genome Aggregation Database
+(@code{gnomAD} version 3.1.2) for the human genome version GRCh38.")
+ (license license:artistic2.0)))
+
(define-public r-org-eck12-eg-db
(package
(name "r-org-eck12-eg-db")