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| author | Ricardo Wurmus <rekado@elephly.net> | 2023-04-24 18:52:08 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-04-24 19:49:04 +0200 |
| commit | 913668e8796f453630c83b7e20df72e60961ad11 (patch) | |
| tree | 3b8da38e1c7c95d6aeb80500e0e0ce2c4148f053 | |
| parent | b8a0a10308458dbbb76ad68cf48c3580cf82eb94 (diff) | |
gnu: salmon: Update to 1.10.1.
* gnu/packages/bioinformatics.scm (salmon): Update to 1.10.1.
[inputs]: Replace cereal-1.3.0 with cereal; add htscodecs.
[native-inputs]: Update hash of pufferfish sources.
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 9 |
1 files changed, 5 insertions, 4 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 75e229a88a..f54b1db86c 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -12020,7 +12020,7 @@ The following file formats are supported: (define-public salmon (package (name "salmon") - (version "1.9.0") + (version "1.10.1") (source (origin (method git-fetch) (uri (git-reference @@ -12029,7 +12029,7 @@ The following file formats are supported: (file-name (git-file-name name version)) (sha256 (base32 - "1370ry3jpj05gplzyny44mqg77a29a6gp8ijmjz135d2igf956r8")) + "0grpcajxf2bch4b74zb66pdssda8yc7jvxj5ckaw0xvw1605rpcj")) (modules '((guix build utils))) (snippet ;; Delete bundled headers for eigen3. @@ -12124,9 +12124,10 @@ The following file formats are supported: (inputs (list boost bzip2 - cereal-1.3.0 + cereal curl eigen + htscodecs jemalloc libgff tbb @@ -12143,7 +12144,7 @@ The following file formats are supported: (file-name (git-file-name "pufferfish" version)) (sha256 (base32 - "048a006mc2d0h78ym58mv67hl1pj480ilc5ifq0rlzfdyyfs1b8i")))))) + "0fcv5rd2k4fabsg489sjfxgjisivhwk1w26gfc88rgpszdkcla36")))))) (home-page "https://github.com/COMBINE-lab/salmon") (synopsis "Quantification from RNA-seq reads using lightweight alignments") (description "Salmon is a program to produce highly-accurate, |