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| author | Efraim Flashner <efraim@flashner.co.il> | 2021-01-17 15:31:21 +0200 |
|---|---|---|
| committer | Efraim Flashner <efraim@flashner.co.il> | 2021-01-17 15:47:32 +0200 |
| commit | fc9fd5496f33f697f4dc1e0dc1f20ba62c15726a (patch) | |
| tree | 4d398aab6234f711ad2bbbc5e2bc85105fec7763 /gnu/local.mk | |
| parent | 3ddeefe854a9f0fc3e33998f001e8445ee72a9f0 (diff) | |
gnu: freebayes: Update to 1.3.3.
* gnu/packages/bioinformatics.scm (freebayes): Update to 1.3.3.
[source]: Add patch. Add snippet to remove vendored library.
[build-system]: Switch to meson-build-system.
[inputs]: Remove bamtools. Add fastahack, smithwaterman, tabixpp.
[native-inputs]: Remove procps, python-2, tabixpp source, smithwaterman
source, multichoose source, fsom source, filevercmp source, fastahack
source, bash-tap source. Add bash-tap, grep, pkg-config, simde, vcflib.
[arguments]: Drop make-flags. Don't delete 'configure phase. Delete
custom 'fix-tests, 'build-tabixpp-and-vcflib, 'fix-makefiles, 'install
phases. Adjust 'unpack-submodule-sources phase to changed native-inputs.
Add new 'patch-source phase.
Diffstat (limited to 'gnu/local.mk')
| -rw-r--r-- | gnu/local.mk | 1 |
1 files changed, 1 insertions, 0 deletions
diff --git a/gnu/local.mk b/gnu/local.mk index 77f1d4a096..6f66021c78 100644 --- a/gnu/local.mk +++ b/gnu/local.mk @@ -998,6 +998,7 @@ dist_patch_DATA = \ %D%/packages/patches/fpc-reproducibility.patch \ %D%/packages/patches/fplll-std-fenv.patch \ %D%/packages/patches/freedink-engine-fix-sdl-hints.patch \ + %D%/packages/patches/freebayes-devendor-deps.patch \ %D%/packages/patches/freeimage-unbundle.patch \ %D%/packages/patches/fuse-overlapping-headers.patch \ %D%/packages/patches/gajim-honour-GAJIM_PLUGIN_PATH.patch \ |