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authorMădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>2023-02-02 03:26:48 +0100
committerRicardo Wurmus <rekado@elephly.net>2023-02-07 10:29:59 +0100
commit27178151c3d0856edaf7de85fbfec2421656ea55 (patch)
treedc3f8948d6b328cd0e3e01e269c59c13777e6fe5 /gnu/packages/bioconductor.scm
parent8f09b385d9184f009d02690e4382d54ee827e346 (diff)
gnu: Add r-glad.
* gnu/packages/bioconductor.scm (r-glad): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm24
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1a7c53257b..703edb3524 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6145,6 +6145,30 @@ GenomicRanges package defines general purpose containers for storing and
manipulating genomic intervals and variables defined along a genome.")
(license license:artistic2.0)))
+(define-public r-glad
+ (package
+ (name "r-glad")
+ (version "2.62.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "GLAD" version))
+ (sha256
+ (base32
+ "0gb52ic5r6nkgm2ynm174vcvbmkbhhjgv71lsmxpxzcsb6rr7qj6"))))
+ (properties `((upstream-name . "GLAD")))
+ (build-system r-build-system)
+ (inputs (list gsl))
+ (propagated-inputs (list r-aws))
+ (native-inputs (list pkg-config))
+ (home-page "http://bioinfo.curie.fr")
+ (synopsis "Gain and loss analysis of DNA")
+ (description
+ "This package helps with the analysis of array @acronym{CGH, comparative
+genomic hybridization} data by detecting of the breakpoints in the genomic
+profiles and assignment of a status (gain, normal or loss) to each chromosomal
+regions identified.")
+ (license license:gpl2)))
+
(define-public r-gostats
(package
(name "r-gostats")