diff options
author | Ricardo Wurmus <rekado@elephly.net> | 2023-07-19 14:54:02 +0200 |
---|---|---|
committer | Ricardo Wurmus <rekado@elephly.net> | 2023-07-19 14:54:02 +0200 |
commit | d0c96a78edf32409ef39cec6986c131c280f9ec5 (patch) | |
tree | 5f32661b3771e0b9eeafd7ce78b3386c36098b76 /gnu/packages/bioconductor.scm | |
parent | 46cae56dfe63ca72b5aaf38c28275b6109d9a572 (diff) |
gnu: Add r-genomicdatacommons.
* gnu/packages/bioconductor.scm (r-genomicdatacommons): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r-- | gnu/packages/bioconductor.scm | 31 |
1 files changed, 31 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index f6917405a3..7b633f4bad 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -6996,6 +6996,37 @@ junction detection, and working with the nucleotide content of the alignments.") (license license:artistic2.0))) +(define-public r-genomicdatacommons + (package + (name "r-genomicdatacommons") + (version "1.24.2") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "GenomicDataCommons" version)) + (sha256 + (base32 + "0dgvhi6nbc1qvrdwww2r39gxd2xmbadvy03lxh5nny9pyhhdlz3l")))) + (properties `((upstream-name . "GenomicDataCommons"))) + (build-system r-build-system) + (propagated-inputs (list r-dplyr + r-genomicranges + r-httr + r-iranges + r-jsonlite + r-magrittr + r-rappdirs + r-readr + r-rlang + r-tibble + r-xml2)) + (native-inputs (list r-knitr)) + (home-page "https://bioconductor.org/packages/GenomicDataCommons") + (synopsis "NIH/NCI genomic data commons access") + (description + "This package lets you programmatically access the NIH/NCI Genomic Data +Commons RESTful service.") + (license license:artistic2.0))) + (define-public r-genomicfeatures (package (name "r-genomicfeatures") |