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authorRicardo Wurmus <rekado@elephly.net>2019-03-13 13:49:20 +0100
committerRicardo Wurmus <rekado@elephly.net>2019-03-13 13:49:20 +0100
commit9475a248fcceaaf12733e24aeaa4c9f8cef1cec0 (patch)
treea22efdcb5ecc3b28c4547ea00da58f9693533a54 /gnu/packages/bioconductor.scm
parent09605cb2d16623649064fcd7b26dc7d7e0ae5f88 (diff)
gnu: Add r-illuminahumanmethylationepicmanifest.
* gnu/packages/bioconductor.scm (r-illuminahumanmethylationepicmanifest): New variable.
Diffstat (limited to 'gnu/packages/bioconductor.scm')
-rw-r--r--gnu/packages/bioconductor.scm26
1 files changed, 26 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index f2572b45c2..45711ab6b6 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -682,6 +682,32 @@ probes. It contains the compiled HumanMethylation27 and HumanMethylation450
annotations.")
(license license:artistic2.0)))
+(define-public r-illuminahumanmethylationepicmanifest
+ (package
+ (name "r-illuminahumanmethylationepicmanifest")
+ (version "0.3.0")
+ (source (origin
+ (method url-fetch)
+ ;; We cannot use bioconductor-uri here because this tarball is
+ ;; located under "data/annotation/" instead of "bioc/".
+ (uri (string-append "https://www.bioconductor.org/packages/"
+ "release/data/annotation/src/contrib/"
+ "IlluminaHumanMethylationEPICmanifest_"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "0alhjda5g186z8b1nsmnpfswrlj7prdz8mkwx60wkkl6hkcnk6p3"))))
+ (properties
+ `((upstream-name . "IlluminaHumanMethylationEPICmanifest")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-minfi" ,r-minfi)))
+ (home-page "https://bioconductor.org/packages/IlluminaHumanMethylationEPICmanifest/")
+ (synopsis "Manifest for Illumina's EPIC methylation arrays")
+ (description
+ "This is a manifest package for Illumina's EPIC methylation arrays.")
+ (license license:artistic2.0)))
+
;;; Experiment data