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authorMădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>2023-11-03 15:55:57 +0100
committerRicardo Wurmus <rekado@elephly.net>2023-11-04 17:03:24 +0100
commit4c17016019a1fdb2e49b944a594361d046bd1f00 (patch)
tree4700b454cc90c9beecaada1d931cfafc1b659a52 /gnu/packages/bioinformatics.scm
parenta04800b811a8e735de845f2fc379a1641d85f504 (diff)
gnu: Add r-ewastools.
* gnu/packages/bioinformatics.scm (r-ewastools): New variable. Change-Id: I4117dbee188c7d9547fe63b2b89ec9258bbda60b Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm32
1 files changed, 32 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index bac2e6fc7b..7feea35d74 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -876,6 +876,38 @@ attributes of microbiome data - zero-inflation and over-dispersion, are
simultaneously considered.")
(license license:gpl3))))
+(define-public r-ewastools
+ (let ((commit "f7646cacd73266708479b3fea5d625054d179f95")
+ (revision "1"))
+ (package
+ (name "r-ewastools")
+ (version (git-version "1.7.2" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/hhhh5/ewastools/")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0irarlnxfnasa755adxsn67rxsy01zwhjhw18g4cag08cqiyyw41"))))
+ (properties `((upstream-name . "ewastools")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-data-table
+ r-igraph
+ r-illuminaio
+ r-mblm
+ r-quadprog))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/hhhh5/ewastools/")
+ (synopsis
+ "Quality control toolset for the Illumina Infinium DNA methylation")
+ (description
+ "This package provides a collection of useful functions for working
+with DNA methylation micro-array data.")
+ (license license:unlicense))))
+
(define-public r-numbat
(let ((commit "4ab7752e7d267a3f443756675728521a9b0a7295")
(revision "1"))