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authorRicardo Wurmus <rekado@elephly.net>2023-06-01 14:57:13 +0200
committerRicardo Wurmus <rekado@elephly.net>2023-06-01 20:48:17 +0200
commit525ef60ff43f682ff22dc6c7d23d095225287022 (patch)
treef6d95a925f09a06cba48965cef2cdd437e53e3b3 /gnu/packages/bioinformatics.scm
parentcf388642ce1af18aa1711ad2e79e850bf469e520 (diff)
gnu: Add python-illumina-utils.
* gnu/packages/bioinformatics.scm (python-illumina-utils): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm20
1 files changed, 20 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index b3b10af193..34d4a2e08c 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4639,6 +4639,26 @@ analysis tool Scanpy (Genome Biology, 2018).")
exploration.")
(license license:gpl3+)))
+(define-public python-illumina-utils
+ (package
+ (name "python-illumina-utils")
+ (version "2.12")
+ (source (origin
+ (method url-fetch)
+ (uri (pypi-uri "illumina-utils" version))
+ (sha256
+ (base32
+ "0z9g0prj7pmgl5z4vdpxv3v30grzhc194801qnf0wqzgy7w3aj2s"))))
+ (build-system pyproject-build-system)
+ (arguments (list #:tests? #false)) ;there are none
+ (propagated-inputs (list python-matplotlib python-numpy python-levenshtein))
+ (home-page "https://github.com/meren/illumina-utils")
+ (synopsis "Library and scripts to work with Illumina paired-end data")
+ (description
+ "This package provides a library and collection of scripts to work with
+Illumina paired-end data (for CASAVA 1.8+).")
+ (license license:gpl2+)))
+
(define-public exonerate
(package
(name "exonerate")