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| author | Ricardo Wurmus <rekado@elephly.net> | 2023-06-01 15:00:16 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-06-01 20:48:17 +0200 |
| commit | d411b7d5e7b17f1add3ea8df22560aea6e27c248 (patch) | |
| tree | 04d02d8e9638f40b1112475eb26429559da7b330 /gnu/packages/bioinformatics.scm | |
| parent | 525ef60ff43f682ff22dc6c7d23d095225287022 (diff) | |
gnu: Add python-pyani.
* gnu/packages/bioinformatics.scm (python-pyani): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 21 |
1 files changed, 21 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 34d4a2e08c..fe43b04dcc 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -4659,6 +4659,27 @@ exploration.") Illumina paired-end data (for CASAVA 1.8+).") (license license:gpl2+))) +(define-public python-pyani + (package + (name "python-pyani") + (version "0.2.12") + (source (origin + (method url-fetch) + (uri (pypi-uri "pyani" version)) + (sha256 + (base32 + "124kdg7168nbh4a5wisfws1fgkd89dd4js9v6dml2lvgclbv4mjg")))) + (build-system pyproject-build-system) + (propagated-inputs + (list python-biopython python-matplotlib python-pandas + python-scipy python-seaborn)) + (home-page "https://widdowquinn.github.io/pyani/") + (synopsis "Calculate genome-scale average nucleotide identity") + (description + "Pyani provides a package and script for calculation of genome-scale +average nucleotide identity.") + (license license:expat))) + (define-public exonerate (package (name "exonerate") |