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| author | Ricardo Wurmus <rekado@elephly.net> | 2024-01-16 19:35:37 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2024-01-16 19:35:37 +0100 |
| commit | 9a9f05f1f2427028f70d3f1ab864959b18029f1b (patch) | |
| tree | 66f7bd5117c6092eaaea6585c9f3c14c3eceea75 /gnu/packages/bioinformatics.scm | |
| parent | e0369ba57dd532290a4057113f5ae9a7a8feff86 (diff) | |
gnu: Add samtools-1.14.
* gnu/packages/bioinformatics.scm (samtools-1.14): New variable.
Change-Id: I0bd35b3865d7a417f55f1f768f7eb0c78a795e0f
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 20 |
1 files changed, 20 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index b4b848c0c0..e7ae52176d 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -8520,6 +8520,26 @@ variant calling (in conjunction with bcftools), and a simple alignment viewer.") (license license:expat))) +(define-public samtools-1.14 + (package/inherit samtools + (version "1.14") + (source + (origin + (method url-fetch) + (uri + (string-append "mirror://sourceforge/samtools/samtools/" + version "/samtools-" version ".tar.bz2")) + (sha256 + (base32 + "0x3xdda78ac5vx66b3jdsv9sfhyz4npl4znl1zbaf3lbm6xdlhck")) + (modules '((guix build utils))) + (snippet '(begin + ;; Delete bundled htslib. + (delete-file-recursively "htslib-1.14"))))) + (native-inputs (list pkg-config)) + (inputs + (list htslib-1.14 ncurses perl python zlib)))) + (define-public samtools-1.12 (package/inherit samtools (version "1.12") |