summaryrefslogtreecommitdiff
path: root/gnu/packages/bioinformatics.scm
diff options
context:
space:
mode:
authorRicardo Wurmus <rekado@elephly.net>2022-08-16 16:44:58 +0200
committerRicardo Wurmus <rekado@elephly.net>2022-08-16 16:44:58 +0200
commitb4f389e1b9a3b994b4442aae46f9daa151eeadba (patch)
tree547787b776f6a206d4863b324ed660f38251de48 /gnu/packages/bioinformatics.scm
parentecb7dedaed49b57ad5a6e53f5a0c4f6b4000fa51 (diff)
gnu: Add go-github-com-biogo-hts-cram.
* gnu/packages/bioinformatics.scm (go-github-com-biogo-hts-cram): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm15
1 files changed, 15 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 9c34f4a721..14ca65f875 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -16577,3 +16577,18 @@ useful for bioinformatic analysis.")
(list go-gopkg-in-check-v1))
(synopsis "HTS bgzf module for biogo")
(description "This package provides tools for handling bgzf files.")))
+
+(define-public go-github-com-biogo-hts-cram
+ (package
+ (inherit go-github-com-biogo-hts-bam)
+ (name "go-github-com-biogo-hts-cram")
+ (arguments
+ '(#:import-path "github.com/biogo/hts/cram"
+ #:unpack-path "github.com/biogo/hts"
+ #:tests? #false)) ;require network access
+ (propagated-inputs
+ (list go-gopkg-in-check-v1
+ go-github.com-ulikunitz-xz
+ go-github-com-kortschak-utter))
+ (synopsis "HTS CRAM module for biogo")
+ (description "This package provides tools for handling CRAM files.")))