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authorRicardo Wurmus <rekado@elephly.net>2018-11-07 23:02:55 +0100
committerRicardo Wurmus <rekado@elephly.net>2018-11-07 23:17:35 +0100
commit62365244092576f62931e3178c4ea5598fd91e7b (patch)
tree7838dcf5e94292a67d09e51c02f54f1592bd1089 /gnu/packages/bioinformatics.scm
parent273df99d7d986c4417940d423c649aec727c744e (diff)
gnu: sortmerna: Fetch sources from git.
* gnu/packages/bioinformatics.scm (sortmerna)[source]: Fetch from git.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm12
1 files changed, 6 insertions, 6 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 744eec571e..a571d72bb5 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -5948,14 +5948,14 @@ of these reads to align data quickly through a hash-based indexing scheme.")
(version "2.1b")
(source
(origin
- (method url-fetch)
- (uri (string-append
- "https://github.com/biocore/sortmerna/archive/"
- version ".tar.gz"))
- (file-name (string-append name "-" version ".tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/biocore/sortmerna.git")
+ (commit version)))
+ (file-name (git-file-name name version))
(sha256
(base32
- "1ghaghvd82af9j5adavxh77g7hm247d1r69m3fbi6f1jdivj5ldk"))))
+ "0j3mbz4n25738yijmjbr5r4fyvkgm8v5vn3sshyfvmyqf5q9byqf"))))
(build-system gnu-build-system)
(outputs '("out" ;for binaries
"db")) ;for sequence databases