summaryrefslogtreecommitdiff
path: root/gnu/packages/bioinformatics.scm
diff options
context:
space:
mode:
authorRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2015-12-23 17:34:27 +0100
committerRicardo Wurmus <ricardo.wurmus@mdc-berlin.de>2016-01-07 17:18:17 +0100
commitc43a011de3c0155b4ccf3b02505fbce86d01b22e (patch)
treee5de3f4aec06f0413ceba57dd0c024fb647dd27f /gnu/packages/bioinformatics.scm
parentc63cef669991940108448d23c8b427898cf83547 (diff)
gnu: Add impute.
* gnu/packages/bioinformatics.scm (r-impute): New variable.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm20
1 files changed, 20 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 8c2351da38..9224abda19 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3866,6 +3866,26 @@ dependencies between GO terms can be implemented and applied.")
genome data packages and support for efficient SNP representation.")
(license license:artistic2.0)))
+(define-public r-impute
+ (package
+ (name "r-impute")
+ (version "1.44.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "impute" version))
+ (sha256
+ (base32
+ "0y4x5jk7gsf4xn56jrkdcdnxpcfll4h6ivncd7n4snmzixldvmvw"))))
+ (inputs
+ `(("gfortran" ,gfortran)))
+ (build-system r-build-system)
+ (home-page "http://bioconductor.org/packages/impute")
+ (synopsis "Imputation for microarray data")
+ (description
+ "This package provides a function to impute missing gene expression
+microarray data, using nearest neighbor averaging.")
+ (license license:gpl2+)))
+
(define-public r-qtl
(package
(name "r-qtl")