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authorzimoun <zimon.toutoune@gmail.com>2020-10-30 16:01:45 +0100
committerRicardo Wurmus <rekado@elephly.net>2020-12-09 12:12:45 +0100
commit83129edfb7a7c3af71c05040253acec9fdb1c801 (patch)
tree4112f958fe187f7e5f745582b21d668b4e000142 /gnu/packages/bioinformatics.scm
parent717e53fdc085e3a7b71b9f37da2358282289add4 (diff)
gnu: r-gwascat: Update to 2.22.0.
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.22.0. [propagated-inputs]: Add r-biocfilecache, r-readr, r-snpstats, and r-variantannotation; remove r-biocgenerics, r-ggplot2, r-rsamtools, and r-rtracklayer.
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
-rw-r--r--gnu/packages/bioinformatics.scm14
1 files changed, 7 insertions, 7 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index c49dec1b7e..43571a4644 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -10800,27 +10800,27 @@ with your data.")
(define-public r-gwascat
(package
(name "r-gwascat")
- (version "2.20.1")
+ (version "2.22.0")
(source
(origin
(method url-fetch)
(uri (bioconductor-uri "gwascat" version))
(sha256
(base32
- "1cq5cmdrf0a0arr841yvkh6d8drc15p7mif1afr215l1s3y2dwd4"))))
+ "1aqi1ny93virnzsxkh9ccx3mws70bgv0r8nwgla09vffb7f16nna"))))
(build-system r-build-system)
(propagated-inputs
`(("r-annotationdbi" ,r-annotationdbi)
- ("r-biocgenerics" ,r-biocgenerics)
+ ("r-biocfilecache" ,r-biocfilecache)
("r-biostrings" ,r-biostrings)
("r-genomeinfodb" ,r-genomeinfodb)
("r-genomicfeatures" ,r-genomicfeatures)
("r-genomicranges" ,r-genomicranges)
- ("r-ggplot2" ,r-ggplot2)
("r-iranges" ,r-iranges)
- ("r-rsamtools" ,r-rsamtools)
- ("r-rtracklayer" ,r-rtracklayer)
- ("r-s4vectors" ,r-s4vectors)))
+ ("r-readr" ,r-readr)
+ ("r-s4vectors" ,r-s4vectors)
+ ("r-snpstats" ,r-snpstats)
+ ("r-variantannotation" ,r-variantannotation)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://bioconductor.org/packages/gwascat")