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authorRicardo Wurmus <rekado@elephly.net>2023-02-18 20:32:36 +0100
committerRicardo Wurmus <rekado@elephly.net>2023-02-18 21:11:56 +0100
commitf3329764e2d3ffee7f0d177d33820c93e720b82e (patch)
tree7f2704f5139ba1b485c9794722f312d97befcf95 /gnu/packages/cran.scm
parent1de36ea8d756113f4c2f86e4685c21b058125376 (diff)
gnu: Add r-longdat.
* gnu/packages/cran.scm (r-longdat): New variable.
Diffstat (limited to 'gnu/packages/cran.scm')
-rw-r--r--gnu/packages/cran.scm42
1 files changed, 42 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index ec07e401fa..c7a81b96eb 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -17847,6 +17847,48 @@ hierarchic loggers, multiple handlers per logger, level based filtering, space
handling in messages and custom formatting.")
(license license:gpl3)))
+(define-public r-longdat
+ (package
+ (name "r-longdat")
+ (version "1.1.0")
+ (source (origin
+ (method url-fetch)
+ (uri (cran-uri "LongDat" version))
+ (sha256
+ (base32
+ "1sqfmdv5agyvlw1y3yiv8kxi1040gq75qj4ln1jgb9lsmhdlfpyd"))))
+ (properties `((upstream-name . "LongDat")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-bestnormalize
+ r-car
+ r-dplyr
+ r-effsize
+ r-emmeans
+ r-ggplot2
+ r-glmmtmb
+ r-lme4
+ r-magrittr
+ r-mass
+ r-patchwork
+ r-reshape2
+ r-rlang
+ r-rstatix
+ r-stringr
+ r-tibble
+ r-tidyr))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/CCY-dev/LongDat")
+ (synopsis
+ "Tool for covariate-sensitive longitudinal analysis on omics data")
+ (description
+ "This tool takes longitudinal dataset as input and analyzes if there is
+significant change of the features over time (a proxy for treatments), while
+detects and controls for covariates simultaneously. LongDat is able to take
+in several data types as input, including count, proportion, binary, ordinal
+and continuous data. The output table contains p values, effect sizes and
+covariates of each feature, making the downstream analysis easy.")
+ (license license:gpl2)))
+
(define-public r-longitudinal
(package
(name "r-longitudinal")