diff options
| author | zimoun <zimon.toutoune@gmail.com> | 2020-09-11 20:08:49 +0200 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2020-09-11 21:59:21 +0200 |
| commit | 415aa8a583a018ed2dd7e97a2045e7bd03a67674 (patch) | |
| tree | 399c707d4b5029f07901ec353eef813cd4b832da /gnu/packages/cran.scm | |
| parent | f9c0b2e05a22cc7a6667437c20bc2984e73835ae (diff) | |
gnu: r-phangorn: Move to (gnu packages cran).
* gnu/packages/bioinformatics.scm (r-phangorn): Move from here...
* gnu/packages/cran.scm (r-phangorn): ...to here.
Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 28 |
1 files changed, 28 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 10d480a80c..a3808e9882 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -24496,3 +24496,31 @@ dimensionality reduction; PCA, ICA, t-SNE, standard unsupervised clustering algorithms; density clustering, hierarchical clustering, k-means, and the discovery of differentially expressed genes and markers.") (license license:gpl3))) + +(define-public r-phangorn + (package + (name "r-phangorn") + (version "2.5.5") + (source + (origin + (method url-fetch) + (uri (cran-uri "phangorn" version)) + (sha256 + (base32 + "0ihkaykqjmf80d8wrk3saphxvnv58zma6pd13633bd3cwanc33f5")))) + (build-system r-build-system) + (propagated-inputs + `(("r-ape" ,r-ape) + ("r-fastmatch" ,r-fastmatch) + ("r-igraph" ,r-igraph) + ("r-magrittr" ,r-magrittr) + ("r-matrix" ,r-matrix) + ("r-quadprog" ,r-quadprog) + ("r-rcpp" ,r-rcpp))) + (home-page "https://github.com/KlausVigo/phangorn") + (synopsis "Phylogenetic analysis in R") + (description + "Phangorn is a package for phylogenetic analysis in R. It supports +estimation of phylogenetic trees and networks using Maximum Likelihood, +Maximum Parsimony, distance methods and Hadamard conjugation.") + (license license:gpl2+))) |