Merge branch 'master' into staging

1 files changed, 21 insertions, 20 deletions

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index b0160347c9..46521323c0 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -5813,14 +5813,14 @@ clustering.")
 (define-public r-factominer
   (package
     (name "r-factominer")
-    (version "1.42")
+    (version "2.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "FactoMineR" version))
        (sha256
         (base32
-         "1yl16inb2m89l1czgaf0pgy9655dpr751hyx92yw6rqpd2ryznac"))))
+         "0qiw60ypf3bf5xsqz2b9l82i4jvprjm8lzpp12lhl8d9j5s8m0j8"))))
     (properties `((upstream-name . "FactoMineR")))
     (build-system r-build-system)
     (propagated-inputs
@@ -5828,6 +5828,8 @@ clustering.")
        ("r-cluster" ,r-cluster)
        ("r-ellipse" ,r-ellipse)
        ("r-flashclust" ,r-flashclust)
+       ("r-ggplot2" ,r-ggplot2)
+       ("r-ggrepel" ,r-ggrepel)
        ("r-lattice" ,r-lattice)
        ("r-leaps" ,r-leaps)
        ("r-mass" ,r-mass)
@@ -6419,14 +6421,14 @@ documents.")
 (define-public r-writexl
   (package
     (name "r-writexl")
-    (version "1.1")
+    (version "1.2")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "writexl" version))
        (sha256
         (base32
-         "0w4wnpl3yhaqp63p32bk60xrbmd7xd11kxifjbzrghi7d4483a46"))))
+         "09fhdip6igcg97fjx4c7727cx2lb49l4d74l4i8rg2bag2s5lrj3"))))
     (build-system r-build-system)
     (inputs `(("zlib" ,zlib)))
     (home-page "https://github.com/ropensci/writexl")
@@ -8068,14 +8070,14 @@ Hothorn, Westfall, 2010, CRC Press).")
 (define-public r-emmeans
   (package
     (name "r-emmeans")
-    (version "1.4.2")
+    (version "1.4.3.01")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "emmeans" version))
        (sha256
         (base32
-         "1sxwbh6sym2shrj7gva8q96ca2csqz3081q4d84avpxz15dfz1z1"))))
+         "16v5j31516nbqnj2zhgqvyp5yxd4zcs5zi0aspa5plr2qikvrkmg"))))
     (build-system r-build-system)
     (propagated-inputs
      `(("r-estimability" ,r-estimability)
@@ -10044,14 +10046,14 @@ Touzet and Varre (2007).")
 (define-public r-rnifti
   (package
     (name "r-rnifti")
-    (version "1.0.0")
+    (version "1.0.1")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "RNifti" version))
        (sha256
         (base32
-         "0l61hjnzv043ibpkgrhc0yngaqmc58lkvii8j1dzh022z5wbqrj8"))))
+         "0hfid40pgfi1ykqka8y3v0m7h0iyd6fbvycvqlad3ibmbg621f0w"))))
     (properties `((upstream-name . "RNifti")))
     (build-system r-build-system)
     (propagated-inputs `(("r-rcpp" ,r-rcpp)))
@@ -10157,14 +10159,14 @@ handling.")
 (define-public r-grimport
   (package
     (name "r-grimport")
-    (version "0.9-2")
+    (version "0.9-3")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "grImport" version))
        (sha256
         (base32
-         "0n3y6dzy8s0ifvyrgwbly6cl14lmgd54dyi74s5i984apszpsp16"))))
+         "109mrdvq06xq3zgn9ngz0c7zzgqkv5zbpvsb2i636vmlk6y4dpkd"))))
     (properties `((upstream-name . "grImport")))
     (build-system r-build-system)
     (inputs
@@ -10181,14 +10183,14 @@ PostScript pictures in R plots.")
 (define-public r-grimport2
   (package
     (name "r-grimport2")
-    (version "0.1-5")
+    (version "0.2-0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "grImport2" version))
        (sha256
         (base32
-         "0dyb3nrrvxnkk9q5b136bdivcz1jj3ajx1kscm3k0kkpqjif0pls"))))
+         "19q0dd8fpp1g4xf6sg5f8dxybwxjfw553ra6wgjd8b74fzca40m1"))))
     (properties `((upstream-name . "grImport2")))
     (build-system r-build-system)
     (propagated-inputs
@@ -10212,18 +10214,17 @@ be imported and then exported via the @code{gridSVG} package.")
 (define-public r-kohonen
   (package
     (name "r-kohonen")
-    (version "3.0.8")
+    (version "3.0.10")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "kohonen" version))
        (sha256
         (base32
-         "1zbfqa1qdlry8w6xhypkiknc5gn98v1ijhlsfka8zjg8ajhqgn1q"))))
+         "1ck7j13x701g67bx81x7plszz804jfhl1yg42krcj9x88vm5cscr"))))
     (build-system r-build-system)
     (propagated-inputs
-     `(("r-mass" ,r-mass)
-       ("r-rcpp" ,r-rcpp)))
+     `(("r-rcpp" ,r-rcpp)))
     (home-page "https://cran.r-project.org/web/packages/kohonen")
     (synopsis "Supervised and unsupervised self-organising maps")
     (description
@@ -15432,13 +15433,13 @@ function and interfaces to external frameworks.")
 (define-public r-covr
   (package
     (name "r-covr")
-    (version "3.3.2")
+    (version "3.4.0")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "covr" version))
        (sha256
-        (base32 "160w0m2d06kdd8dar57lpph39rxx55xwncbpl3b21l7j9drh1s5f"))))
+        (base32 "0p44kr6yz5sqza5zvq6divqglzkpv0if9pjpjmzhmdaaddjrqzg5"))))
     (properties `((upstream-name . "covr")))
     (build-system r-build-system)
     (propagated-inputs
@@ -15636,13 +15637,13 @@ effect size.")
 (define-public r-rgdal
   (package
     (name "r-rgdal")
-    (version "1.4-7")
+    (version "1.4-8")
     (source
      (origin
        (method url-fetch)
        (uri (cran-uri "rgdal" version))
        (sha256
-        (base32 "05rvqy8lr2c3phaylmc4g5761208b0xrmgwn9c4a60x7p251dzjs"))))
+        (base32 "1jd691amf3ghznq5im15gvhl6v6k25klpl75m4ngrqf9xlxaa3as"))))
     (properties `((upstream-name . "rgdal")))
     (build-system r-build-system)
     (inputs