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authorMarius Bakke <mbakke@fastmail.com>2020-03-10 20:50:02 +0100
committerMarius Bakke <mbakke@fastmail.com>2020-03-10 20:50:02 +0100
commit50b99c90c87642f664f9c9523a6e40fc8542ddcf (patch)
tree9fc8845e93ba913730e5fb92bbad158716d84e74 /gnu/packages/statistics.scm
parentbda4b5e0453e4c8feda24306b4aa76ad5406eb7d (diff)
parent21656ffa3b6d78a610f0befced20cc9b4b3baab6 (diff)
Merge branch 'master' into core-updates
Diffstat (limited to 'gnu/packages/statistics.scm')
-rw-r--r--gnu/packages/statistics.scm39
1 files changed, 21 insertions, 18 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 0fc6a912ca..ef95a5612e 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -693,14 +693,14 @@ analysis.")
(define-public r-survival
(package
(name "r-survival")
- (version "3.1-8")
+ (version "3.1-11")
(source
(origin
(method url-fetch)
(uri (cran-uri "survival" version))
(sha256
(base32
- "15fj4y8c107bwq22amx88r5hw7qndlcbr9sapzrpkpr7iqz3kkyf"))))
+ "1fbhbm3bnpg1nmj37h1d76x813ggvwk0cp51ixmmgb3pz47i5xj4"))))
(build-system r-build-system)
(propagated-inputs
`(("r-matrix" ,r-matrix)))
@@ -1088,26 +1088,25 @@ using just two functions: melt and dcast (or acast).")
(define-public r-ggplot2
(package
(name "r-ggplot2")
- (version "3.2.1")
+ (version "3.3.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggplot2" version))
(sha256
- (base32 "0mjswqiqcwm0aqxll16bx2kwa6c9km3aql87bdj4347n1ali94g3"))))
+ (base32 "0j21am605kqqzlwhm45kaj0m2irnmy2vz0j7kzi9f0qdzrv3q3ij"))))
(build-system r-build-system)
(propagated-inputs
`(("r-digest" ,r-digest)
+ ("r-glue" ,r-glue)
("r-gtable" ,r-gtable)
- ("r-lazyeval" ,r-lazyeval)
+ ("r-isoband" ,r-isoband)
("r-mass" ,r-mass)
("r-mgcv" ,r-mgcv)
("r-tibble" ,r-tibble)
- ("r-reshape2" ,r-reshape2)
("r-rlang" ,r-rlang)
("r-scales" ,r-scales)
("r-svglite" ,r-svglite) ; Needed for 'ggsave'
- ("r-viridislite" ,r-viridislite)
("r-withr" ,r-withr)))
(home-page "https://ggplot2.tidyverse.org")
(synopsis "An implementation of the grammar of graphics")
@@ -1415,7 +1414,7 @@ emitter (http://pyyaml.org/wiki/LibYAML) for R.")
("r-stringr" ,r-stringr)
("r-xfun" ,r-xfun)
("r-yaml" ,r-yaml)))
- (home-page "http://yihui.name/knitr/")
+ (home-page "https://yihui.org/knitr/")
(synopsis "General-purpose package for dynamic report generation in R")
(description
"This package provides a general-purpose tool for dynamic report
@@ -1651,13 +1650,13 @@ and printing capabilities than traditional data frames.")
(define-public r-dplyr
(package
(name "r-dplyr")
- (version "0.8.4")
+ (version "0.8.5")
(source (origin
(method url-fetch)
(uri (cran-uri "dplyr" version))
(sha256
(base32
- "1nd0mmvqjbzbknawa520f64p9zlj9lwdlq0hh7c1mciyy7ah6641"))))
+ "0602b4a9nffxx67q57csqp87nkrv33nn9wlaw1458yys9fzx6l2p"))))
(build-system r-build-system)
(propagated-inputs
`(("r-assertthat" ,r-assertthat)
@@ -1672,6 +1671,8 @@ and printing capabilities than traditional data frames.")
("r-rlang" ,r-rlang)
("r-tibble" ,r-tibble)
("r-tidyselect" ,r-tidyselect)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/hadley/dplyr")
(synopsis "Tools for working with data frames in R")
(description
@@ -1879,14 +1880,14 @@ building design matrices.")
(define-public python-statsmodels
(package
(name "python-statsmodels")
- (version "0.9.0")
+ (version "0.11.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "statsmodels" version))
(sha256
(base32
- "0fxs8a7sp4d7jvqlm36yi45i2d28kjfvraf9q8i9jr1chhxgjqb4"))))
+ "1w6mf8b86vizi2895j11szqryr2v1ckjig3wp9fv94aslfh3zpjv"))))
(build-system python-build-system)
(arguments
`(;; The test suite is very large and rather brittle. Tests often fail
@@ -3150,7 +3151,7 @@ using the multicore functionality of the parallel package.")
("r-jsonlite" ,r-jsonlite)
("r-magrittr" ,r-magrittr)
("r-promises" ,r-promises)))
- (home-page "http://rstudio.github.io/DT")
+ (home-page "https://rstudio.github.io/DT")
(synopsis "R wrapper of the DataTables JavaScript library")
(description
"This package allows for data objects in R to be rendered as HTML tables
@@ -3608,6 +3609,8 @@ memory usage.")
`(("r-ggplot2" ,r-ggplot2)
("r-gridextra" ,r-gridextra)
("r-viridislite" ,r-viridislite)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr))) ; for vignettes
(home-page "https://github.com/sjmgarnier/viridis")
(synopsis "Matplotlib default color map")
(description
@@ -3919,7 +3922,7 @@ from within R.")
(propagated-inputs
`(("r-lattice" ,r-lattice)
("r-matrix" ,r-matrix)))
- (home-page "http://spams-devel.gforge.inria.fr")
+ (home-page "https://spams-devel.gforge.inria.fr")
(synopsis "Toolbox for solving sparse estimation problems")
(description "SPAMS (SPArse Modeling Software) is an optimization toolbox
for solving various sparse estimation problems. It includes tools for the
@@ -4638,14 +4641,14 @@ original public code has been corrected.")
(define-public r-modeltools
(package
(name "r-modeltools")
- (version "0.2-22")
+ (version "0.2-23")
(source
(origin
(method url-fetch)
(uri (cran-uri "modeltools" version))
(sha256
(base32
- "1s9lmkac3rl0nknf4wizfhg7ryq7c8yvvyc4z619238br27hhsi5"))))
+ "1vqh69256h344sbj5affm0kmc77dakrxp6442xfdnfd0y5d8sgkb"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/modeltools")
(synopsis "Tools and classes for statistical models")
@@ -4853,14 +4856,14 @@ generally.")
(define-public r-robust
(package
(name "r-robust")
- (version "0.4-18.2")
+ (version "0.5-0.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "robust" version))
(sha256
(base32
- "02x7d6dgx3skiadvx5m3c44b4bhz37ycpfhc25dhhv50y1db6l3k"))))
+ "1ks5scp8bnicl9j1r8yrmz668fjs6ifdmi540zw6d2ck500bbw42"))))
(build-system r-build-system)
(propagated-inputs
`(("r-fit-models" ,r-fit-models)