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| author | Vinicius Monego <monego@posteo.net> | 2023-05-20 15:42:57 -0300 |
|---|---|---|
| committer | Vinicius Monego <monego@posteo.net> | 2023-06-25 10:43:22 -0300 |
| commit | 514856e1aa7875ed3aea4c4f7d749e3dca598e0c (patch) | |
| tree | 80a5e8cb192ba0f615b04fb2a909353f3a7ce824 /gnu/packages/statistics.scm | |
| parent | a38f5a71adaf73335b4c07145893d80745bc718d (diff) | |
gnu: Add python-arviz.
* gnu/packages/statistics.scm (python-arviz): New variable.
Diffstat (limited to 'gnu/packages/statistics.scm')
| -rw-r--r-- | gnu/packages/statistics.scm | 48 |
1 files changed, 48 insertions, 0 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index dbb79af628..a689d14f2e 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -2125,6 +2125,54 @@ point (up to 50% contamination) and have a number of nice applications in machine learning, computer vision, and high-dimensional statistics.") (license license:asl2.0))) +(define-public python-arviz + (package + (name "python-arviz") + (version "0.15.1") + (source (origin + (method git-fetch) ; PyPI misses some test files + (uri (git-reference + (url "https://github.com/arviz-devs/arviz") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0nqr4v927r9kc50z7rwlk2m8nw3dnnmmwmwcfijzd93gbg53wc4f")))) + (build-system pyproject-build-system) + (arguments + ;; FIXME: matplotlib tests fail because of the "--save" test flag. + (list #:test-flags #~'("--ignore" + "arviz/tests/base_tests/test_plots_matplotlib.py") + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'remove-radon + (lambda _ + (delete-file + ;; This dataset is loaded remotely, it's not supposed to + ;; be copied locally. + "arviz/data/example_data/code/radon/radon.json"))) + (add-before 'check 'write-permission + (lambda _ + ;; 3 tests require write permission. + (setenv "HOME" "/tmp")))))) + (native-inputs (list python-cloudpickle python-pytest)) + (propagated-inputs (list python-h5netcdf + python-matplotlib + python-numpy + python-packaging + python-pandas + python-scipy + python-typing-extensions + python-xarray + python-xarray-einstats)) + (home-page "https://github.com/arviz-devs/arviz") + (synopsis "Exploratory analysis of Bayesian models") + (description + "ArviZ is a Python package for exploratory analysis of Bayesian models. +It includes functions for posterior analysis, data storage, model checking, +comparison and diagnostics.") + (license license:asl2.0))) + (define-public python-patsy (package (name "python-patsy") |