diff options
| author | Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> | 2023-11-06 12:06:39 +0100 |
|---|---|---|
| committer | Ricardo Wurmus <rekado@elephly.net> | 2023-11-13 14:57:00 +0100 |
| commit | 459d9ebd2ad96fb3978ece93ba6ec67917288b69 (patch) | |
| tree | 9193df9b6c6aee400a9d75f2a186a2db7c661f16 /gnu | |
| parent | 628926de8023aebe99155529d3ff9c6cb2408e98 (diff) | |
gnu: Add r-bsgenome-ecoli-ncbi-20080805.
* gnu/packages/bioconductor.scm (r-bsgenome-ecoli-ncbi-20080805):
New variable.
Change-Id: Ic42527fa334be4c23ebe2e19461571d899db77ca
Diffstat (limited to 'gnu')
| -rw-r--r-- | gnu/packages/bioconductor.scm | 22 |
1 files changed, 22 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 19c5e7b50b..9196866404 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -543,6 +543,28 @@ Finder (TRF mask). Only the AGAPS and AMB masks are \"active\" by default.") as provided by UCSC (danRer11, May 2017) and stored in Biostrings objects.") (license license:artistic2.0))) +(define-public r-bsgenome-ecoli-ncbi-20080805 + (package + (name "r-bsgenome-ecoli-ncbi-20080805") + (version "1.3.1000") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "BSgenome.Ecoli.NCBI.20080805" version + 'annotation)) + (sha256 + (base32 "1l7mjyys1kaq4mbia9jamyw6sd0ij1wypwxvwy8aksan3gcfnh27")))) + (properties `((upstream-name . "BSgenome.Ecoli.NCBI.20080805"))) + (build-system r-build-system) + (propagated-inputs (list r-bsgenome)) + (home-page + "https://bioconductor.org/packages/BSgenome.Ecoli.NCBI.20080805") + (synopsis "Escherichia coli full genomes") + (description + "This package provides Escherichia coli full genomes for several strains +as provided by NCBI on 2008/08/05 and stored in Biostrings objects.") + (license license:artistic2.0))) + (define-public r-bsgenome-hsapiens-1000genomes-hs37d5 (package (name "r-bsgenome-hsapiens-1000genomes-hs37d5") |