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authorMădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>2023-11-06 12:06:43 +0100
committerRicardo Wurmus <rekado@elephly.net>2023-11-13 15:01:15 +0100
commit598b911334c43a1cc7d047c386f45f83d36d8aee (patch)
tree7fa58ed89a331824b319a6773ac77e56e47929e0 /gnu
parent77025bd51139c74d572299f4b7b33e071cd54cd8 (diff)
gnu: Add r-bayesknockdown.
* gnu/packages/bioconductor.scm (r-bayesknockdown): New variable. Change-Id: Icceffc04071efaa8a8b79144005fa7745abc7e1a
Diffstat (limited to 'gnu')
-rw-r--r--gnu/packages/bioconductor.scm24
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index cf7e1c07ac..d27ccce6c2 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -22757,6 +22757,30 @@ Functions are also provided to enable smooth interoperability of multiple
Python environments in a single R session.")
(license license:gpl3)))
+(define-public r-bayesknockdown
+ (package
+ (name "r-bayesknockdown")
+ (version "1.28.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "BayesKnockdown" version))
+ (sha256
+ (base32 "1argd4gfld2yb0vvpgb5k7m6agmi58712f6g5dj4gnb7kg4rp1l8"))))
+ (properties `((upstream-name . "BayesKnockdown")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-biobase))
+ (home-page "https://bioconductor.org/packages/BayesKnockdown")
+ (synopsis "Posterior probabilities for edges from knockdown data")
+ (description
+ "This package provides a simple, fast Bayesian method for computing
+posterior probabilities for relationships between a single predictor variable
+and multiple potential outcome variables, incorporating prior probabilities of
+relationships. In the context of knockdown experiments, the predictor
+variable is the knocked-down gene, while the other genes are potential
+targets. It can also be used for differential expression/2-class data.")
+ (license license:gpl3)))
+
(define-public r-biocthis
(package
(name "r-biocthis")