diff options
Diffstat (limited to 'gnu/packages/bioinformatics.scm')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 10 |
1 files changed, 9 insertions, 1 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 1f2991418a..3f94ef54cd 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -10896,7 +10896,15 @@ with narrow binding events such as transcription factor ChIP-seq.") `(#:tests? #f ; no tests #:phases (modify-phases %standard-phases - (delete 'configure) + (replace 'configure + (lambda _ + ;; Trim Galore tries to figure out what version of Python + ;; cutadapt is using by looking at the shebang. Of course that + ;; doesn't work, because cutadapt is wrapped in a shell script. + (substitute* "trim_galore" + (("my \\$python_return.*") + "my $python_return = \"Python 3.999\";\n")) + #t)) (delete 'build) (add-after 'unpack 'hardcode-tool-references (lambda* (#:key inputs #:allow-other-keys) |