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Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 24 |
1 files changed, 24 insertions, 0 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 85e0fa98f9..9e3f4648bc 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -31108,6 +31108,30 @@ and multivariate regression), and analysis of variance tolerance intervals. Visualizations are also available for most of these settings.") (license license:gpl2+))) +(define-public r-topdom + (package + (name "r-topdom") + (version "0.10.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "TopDom" version)) + (sha256 + (base32 "1rryfnwvdlpdrjgs6sciy91cxfp4jykll0swclasydjvj4n642i6")))) + (properties `((upstream-name . "TopDom"))) + (build-system r-build-system) + (propagated-inputs (list r-ggplot2 r-matrixstats r-reshape2 r-tibble)) + (home-page "https://github.com/HenrikBengtsson/TopDom") + (synopsis "Efficient method for identifying genomic topological domains") + (description + "This method identifies topological domains in genomes from Hi-C sequence +data. The authors published an implementation of their method as an R script. +This package originates from those original @code{TopDom} R scripts and +provides help pages adopted from the original @code{TopDom} PDF documentation. +It also provides a small number of bug fixes to the original code.") + ;; Either version of the GPL + (license (list license:gpl2 license:gpl3)))) + ;; Keep this in sync with the liblantern package. (define-public r-torch (package |