diff options
Diffstat (limited to 'gnu/packages/cran.scm')
| -rw-r--r-- | gnu/packages/cran.scm | 143 |
1 files changed, 125 insertions, 18 deletions
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm index 95e0faf2a0..603d231a04 100644 --- a/gnu/packages/cran.scm +++ b/gnu/packages/cran.scm @@ -95,13 +95,13 @@ error stream.") (define-public r-rcpp (package (name "r-rcpp") - (version "0.12.14") + (version "0.12.15") (source (origin (method url-fetch) (uri (cran-uri "Rcpp" version)) (sha256 - (base32 "0qvyxggddyg87lza45hjl0a2prabdyshkqzkz418vi777zygqa6s")))) + (base32 "1pnv6sl4vdn69ygmgrb1b3gsigfdcfb56wnzikic93l8gkvdsvxv")))) (build-system r-build-system) (home-page "http://www.rcpp.org") (synopsis "Seamless R and C++ integration") @@ -206,14 +206,14 @@ on (non-orthogonal) variable vectors in scatterplots and biplots.") (define-public r-shape (package (name "r-shape") - (version "1.4.3") + (version "1.4.4") (source (origin (method url-fetch) (uri (cran-uri "shape" version)) (sha256 (base32 - "1v9xp60p813rnx41vchkh32qmcb4z2zp9l7r1a8a6f8aqylnq3vj")))) + "0hadk3mapkhbh8xjkiz52vxdagmmgvm15xwpzb90ikw4giyipjzl")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/shape") (synopsis "Functions for plotting graphical shapes") @@ -321,14 +321,14 @@ rows, dropping names) to see if the modified versions are identical.") (define-public r-dendextend (package (name "r-dendextend") - (version "1.6.0") + (version "1.7.0") (source (origin (method url-fetch) (uri (cran-uri "dendextend" version)) (sha256 (base32 - "0pichh08zi12lpxzc061dmv4smj6lizygd1xymln8wfz18sf7923")))) + "1krvqadnnh53xx5ql7bwzxaif6a317jzbs1m00gnc6jnj03rfl5d")))) (build-system r-build-system) (propagated-inputs `(("r-fpc" ,r-fpc) @@ -542,14 +542,14 @@ plot networks.") (define-public r-proxy (package (name "r-proxy") - (version "0.4-20") + (version "0.4-21") (source (origin (method url-fetch) (uri (cran-uri "proxy" version)) (sha256 (base32 - "15g6dacdmlbkcnimblscghl23aj732cn6qwbs583r4im9v5nvbla")))) + "1vih8gsfzv97h5c8ixd1qjnn02i7fzla2p9fdj2wpisqhx0p0xv0")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/proxy") (synopsis "Distance and similarity measures") @@ -562,14 +562,14 @@ most popular ones.") (define-public r-sp (package (name "r-sp") - (version "1.2-5") + (version "1.2-7") (source (origin (method url-fetch) (uri (cran-uri "sp" version)) (sha256 (base32 - "09yydnacp33yx0kn537k96fjlbf75fjafqfknpa5gvci4l888bqd")))) + "0q04yfgyjannsrzl0ppwcv0simrxrrbx2iz5mzaafc5x38zf0q3d")))) (build-system r-build-system) (propagated-inputs `(("r-lattice" ,r-lattice))) @@ -989,20 +989,44 @@ testing framework of Wald are generic and can therefore also be used in other contexts.") (license license:gpl2+))) +(define-public r-squarem + (package + (name "r-squarem") + (version "2017.10-1") + (source + (origin + (method url-fetch) + (uri (cran-uri "SQUAREM" version)) + (sha256 + (base32 + "10xj26x7qjyvzndnbjl5krr9wabnb9cbrnp3m7xg673g8ddr12cv")))) + (properties `((upstream-name . "SQUAREM"))) + (build-system r-build-system) + (home-page "http://www.jhsph.edu/agingandhealth/People/Faculty_personal_pages/Varadhan.html") + (synopsis "Squared Extrapolation Methods for Accelerating EM-Like Monotone Algorithms") + (description + "This package provides algorithms for accelerating the convergence of +slow, monotone sequences from smooth, contraction mapping such as the EM +algorithm. It can be used to accelerate any smooth, linearly convergent +acceleration scheme. A tutorial style introduction to this package is +available in a vignette.") + (license license:gpl2+))) + (define-public r-lava (package (name "r-lava") - (version "1.5.1") + (version "1.6") (source (origin (method url-fetch) (uri (cran-uri "lava" version)) (sha256 (base32 - "1vcm04h9i39gmf2prl5d4j4il4gs6skzr6y2fvl1vn4hklna87f4")))) + "02xf5d968raz9gnq5ywy04wz29xpdyca1hm79vbbg1mcxvzdl1dz")))) (build-system r-build-system) (propagated-inputs `(("r-numderiv" ,r-numderiv) + ("r-squarem" ,r-squarem) ("r-survival" ,r-survival))) (home-page "https://github.com/kkholst/lava") (synopsis "Latent variable models") @@ -1014,14 +1038,14 @@ variable models.") (define-public r-drr (package (name "r-drr") - (version "0.0.2") + (version "0.0.3") (source (origin (method url-fetch) (uri (cran-uri "DRR" version)) (sha256 (base32 - "1scfwp6ry6apxzqjclsmn2frxp9qfw6zxsxn5w0j0q3sz42hz1h2")))) + "1yd1fvllfkcrwg9v322n4wkk4q4q84nvy58y4vac9pdr3yf3i4vl")))) (properties `((upstream-name . "DRR"))) (build-system r-build-system) (propagated-inputs @@ -1106,14 +1130,14 @@ calendar objects.") (define-public r-ddalpha (package (name "r-ddalpha") - (version "1.3.1") + (version "1.3.1.1") (source (origin (method url-fetch) (uri (cran-uri "ddalpha" version)) (sha256 (base32 - "0pczw9543y7f92m7gyk7rxcjn8vsjaldc5vl0r56ywip9i374zbh")))) + "13w8ir5rd80rka4mq343zd4wn93vfw870lzfqrd3cxgwb1bwcw7y")))) (build-system r-build-system) (propagated-inputs `(("r-bh" ,r-bh) @@ -1279,14 +1303,14 @@ provides a one-row summary of model-level statistics.") (define-public r-recipes (package (name "r-recipes") - (version "0.1.1") + (version "0.1.2") (source (origin (method url-fetch) (uri (cran-uri "recipes" version)) (sha256 (base32 - "0id46c7iaf49miw4kxpidsbg3hdywav43n1lh2zd1vg5946bzg04")))) + "1car3a3mqn87pz049cbgkaayz86970mvkapk6al2k7jjw76306l9")))) (build-system r-build-system) (propagated-inputs `(("r-broom" ,r-broom) @@ -2072,3 +2096,86 @@ around the relevant area. This work is based on the @code{ggplot2} and dendrogram panes, and the placing of factor variables in the sides of the heatmap.") (license (list license:gpl2 license:gpl3)))) + +(define-public r-xfun + (package + (name "r-xfun") + (version "0.1") + (source + (origin + (method url-fetch) + (uri (cran-uri "xfun" version)) + (sha256 + (base32 + "1sm51gmwgw876d6d1q8smxmfgfh6zsnykfx8qp8z6jmh0fvd89pj")))) + (build-system r-build-system) + (home-page "https://github.com/yihui/xfun") + (synopsis "Miscellaneous functions") + (description + "This package provides miscellaneous functions commonly used in other +packages maintained by Yihui Xie.") + (license license:expat))) + +(define-public r-utf8 + (package + (name "r-utf8") + (version "1.1.3") + (source + (origin + (method url-fetch) + (uri (cran-uri "utf8" version)) + (sha256 + (base32 + "03s4j6059q0nly68vpk6wy3p3f5ypakw93fj35kzd82b4z1r9cs3")))) + (build-system r-build-system) + (home-page "https://github.com/patperry/r-utf8") + (synopsis "Unicode text processing") + (description + "This package provides tools to process and print UTF-8 encoded +international text (Unicode). Input, validate, normalize, encode, format, and +display.") + (license license:asl2.0))) + +(define-public r-pillar + (package + (name "r-pillar") + (version "1.1.0") + (source + (origin + (method url-fetch) + (uri (cran-uri "pillar" version)) + (sha256 + (base32 + "1gh3j2pbbf5y4d5nyqnlr0x27jjyvjjspcccmw61airs1n6rx8jq")))) + (build-system r-build-system) + (propagated-inputs + `(("r-cli" ,r-cli) + ("r-crayon" ,r-crayon) + ("r-rlang" ,r-rlang) + ("r-utf8" ,r-utf8))) + (home-page "https://github.com/r-lib/pillar") + (synopsis "Coloured formatting for columns") + (description + "This package provides a @code{pillar} generic designed for formatting +columns of data using the full range of colours provided by modern +terminals.") + (license license:gpl3))) + +(define-public r-uuid + (package + (name "r-uuid") + (version "0.1-2") + (source + (origin + (method url-fetch) + (uri (cran-uri "uuid" version)) + (sha256 + (base32 + "1gmisd630fc8ybg845hbg13wmm3pk3npaamrh5wqbc1nqd6p0wfx")))) + (build-system r-build-system) + (home-page "http://www.rforge.net/uuid") + (synopsis "Tools for generating and handling of UUIDs") + (description + "This package provides tools for generating and handling of +@dfn{Universally Unique Identifiers} (UUIDs).") + (license license:expat))) |