diff options
Diffstat (limited to 'gnu/packages/databases.scm')
| -rw-r--r-- | gnu/packages/databases.scm | 408 |
1 files changed, 350 insertions, 58 deletions
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm index 128b349cae..56d838dd58 100644 --- a/gnu/packages/databases.scm +++ b/gnu/packages/databases.scm @@ -10,7 +10,7 @@ ;;; Copyright © 2015 Eric Dvorsak <eric@dvorsak.fr> ;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com> ;;; Copyright © 2016 Christine Lemmer-Webber <cwebber@dustycloud.org> -;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il> +;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021, 2022 Efraim Flashner <efraim@flashner.co.il> ;;; Copyright © 2016, 2017 Nikita <nikita@n0.is> ;;; Copyright © 2016, 2017, 2018 Roel Janssen <roel@gnu.org> ;;; Copyright © 2016 David Craven <david@craven.ch> @@ -28,15 +28,15 @@ ;;; Copyright © 2017, 2018 Ben Woodcroft <donttrustben@gmail.com> ;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com> ;;; Copyright © 2017, 2018, 2019 Pierre Langlois <pierre.langlois@gmx.com> -;;; Copyright © 2015, 2017, 2018, 2019, 2021 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2015, 2017, 2018, 2019, 2021, 2022 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2017 Kristofer Buffington <kristoferbuffington@gmail.com> ;;; Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net> ;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com> -;;; Copyright © 2018, 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com> +;;; Copyright © 2018, 2021, 2022 Maxim Cournoyer <maxim.cournoyer@gmail.com> ;;; Copyright © 2019 Jack Hill <jackhill@jackhill.us> ;;; Copyright © 2019 Alex Griffin <a@ajgrf.com> ;;; Copyright © 2019 Gábor Boskovits <boskovits@gmail.com> -;;; Copyright © 2019, 2021 Guillaume Le Vaillant <glv@posteo.net> +;;; Copyright © 2019, 2021, 2022 Guillaume Le Vaillant <glv@posteo.net> ;;; Copyright © 2020 Pierre Neidhardt <mail@ambrevar.xyz> ;;; Copyright © 2020, 2021 Nicolò Balzarotti <nicolo@nixo.xyz> ;;; Copyright © 2020 Tanguy Le Carrour <tanguy@bioneland.org> @@ -55,6 +55,8 @@ ;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com> ;;; Copyright © 2021 jgart <jgart@dismail.de> ;;; Copyright © 2021 Foo Chuan Wei <chuanwei.foo@hotmail.com> +;;; Copyright © 2022 Zhu Zihao <all_but_last@163.com> +;;; Copyright © 2021 Brice Waegeneire <brice@waegenei.re> ;;; ;;; This file is part of GNU Guix. ;;; @@ -89,6 +91,7 @@ #:use-module (gnu packages curl) #:use-module (gnu packages cyrus-sasl) #:use-module (gnu packages dbm) + #:use-module (gnu packages docbook) #:use-module (gnu packages emacs) #:use-module (gnu packages flex) #:use-module (gnu packages freedesktop) @@ -132,6 +135,7 @@ #:use-module (gnu packages python-science) #:use-module (gnu packages python-web) #:use-module (gnu packages python-xyz) + #:use-module (gnu packages qt) #:use-module (gnu packages rdf) #:use-module (gnu packages readline) #:use-module (gnu packages regex) @@ -164,6 +168,7 @@ #:use-module (guix build-system meson) #:use-module (guix build-system perl) #:use-module (guix build-system python) + #:use-module (guix build-system qt) #:use-module (guix build-system ruby) #:use-module (guix build-system cmake) #:use-module (guix build-system scons) @@ -629,6 +634,59 @@ around TangentOrg’s libmemcached library, and can be used as a drop-in replacement for the code@{python-memcached} library.") (license license:bsd-3))) +(define-public go-github-com-bradfitz-gomemcache + (package + (name "go-github-com-bradfitz-gomemcache") + (version "0.0.0-20190913173617-a41fca850d0b") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/bradfitz/gomemcache") + (commit (go-version->git-ref version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "18qpds6xr73jy80pj7l3pc1l1ndcy3va2dl8fzk17bgwg49sxwfz")) + (modules '((guix build utils))) + (snippet + '(begin + ;; Fixes the 'untyped-int -> string of one rune' issue. + ;; https://github.com/golang/go/issues/32479 + (substitute* "memcache/memcache_test.go" + (("string\\(0x7f") "string(rune(0x7f)")))))) + (build-system go-build-system) + (arguments + '(#:unpack-path "github.com/bradfitz/gomemcache" + #:import-path "github.com/bradfitz/gomemcache/memcache")) + (home-page "https://github.com/bradfitz/gomemcache") + (synopsis "Memcache client library in Go") + (description + "This is a memcache client library for the Go programming language.") + (license license:asl2.0))) + +(define-public go-github-com-couchbase-gomemcached + (package + (name "go-github-com-couchbase-gomemcached") + (version "0.1.4") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/couchbase/gomemcached") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "10w74gc05x5naspls39sv2r92krrg31mk266w3lyqqwc0s3fxysl")))) + (build-system go-build-system) + (arguments '(#:import-path "github.com/couchbase/gomemcached")) + (native-inputs + (list go-github-com-stretchr-testify)) + (home-page "https://github.com/couchbase/gomemcached") + (synopsis "Memcached binary protocol toolkit for go") + (description + "This package provides memcache client and server functionality.") + (license license:expat))) + (define-public litecli (package (name "litecli") @@ -935,6 +993,14 @@ Language.") #:parallel-tests? ,(target-x86-64?) #:phases (modify-phases %standard-phases + ,@(if (target-ppc32?) + `((add-after 'unpack 'apply-libatomics-patch + (lambda* (#:key inputs #:allow-other-keys) + (let ((patch-file + (assoc-ref inputs + "mariadb-link-libatomic.patch"))) + (invoke "patch" "-p1" "-i" patch-file))))) + '()) (add-after 'unpack 'adjust-output-references (lambda _ ;; The build system invariably prepends $CMAKE_INSTALL_PREFIX @@ -1085,7 +1151,13 @@ Language.") (("-lssl -lcrypto" all) (string-append "-L" openssl "/lib " all))))))))) (native-inputs - (list bison perl)) + (if (target-ppc32?) + `(("mariadb-link-libatomic.patch" + ,(search-patch "mariadb-link-libatomic.patch")) + ("patch" ,patch) + ("bison" ,bison) + ("perl" ,perl)) + (list bison perl))) (inputs `(("jemalloc" ,jemalloc) ("libaio" ,libaio) @@ -1158,49 +1230,54 @@ and high-availability (HA).") (define-public postgresql-14 (package (name "postgresql") - (version "14.1") + (version "14.2") (source (origin (method url-fetch) (uri (string-append "https://ftp.postgresql.org/pub/source/v" version "/postgresql-" version ".tar.bz2")) (sha256 (base32 - "07x45iycqpps0qh3ingc09jgn9rpnmc3gixx0qprhf5flwg10g2d")) + "0ylpka64wli72jvjyqcayvlw44zk1hsbapb93l8gh4l98qp8pxrc")) (patches (search-patches "postgresql-disable-resolve_symlinks.patch")))) (build-system gnu-build-system) (arguments - `(#:configure-flags '("--with-uuid=e2fs" "--with-openssl" - ;; PostgreSQL installs its own Makefile (should it?). - ;; Prevent it from retaining needless references to - ;; the build tools in order to save size. - "MKDIR_P=mkdir -p" "INSTALL_BIN=install -c" - "LD=ld" "TAR=tar") - #:phases - (modify-phases %standard-phases - (add-before 'configure 'patch-/bin/sh - (lambda _ - ;; Refer to the actual shell. - (substitute* '("src/bin/pg_ctl/pg_ctl.c" - "src/bin/psql/command.c") - (("/bin/sh") (which "sh"))) - #t)) - (add-before 'configure 'set-socket-dir - (lambda _ - (substitute* '("src/include/pg_config_manual.h") - (("DEFAULT_PGSOCKET_DIR[^\n]*") - "DEFAULT_PGSOCKET_DIR \"/var/run/postgresql\"")) - #t)) - (add-after 'build 'build-contrib - (lambda _ - (invoke "make" "-C" "contrib"))) - (add-after 'install 'install-contrib - (lambda _ - (invoke "make" "-C" "contrib" "install")))))) - (inputs - `(("readline" ,readline) - ("libuuid" ,util-linux "lib") - ("openssl" ,openssl) - ("zlib" ,zlib))) + (list + #:configure-flags + #~(list "--with-uuid=e2fs" "--with-openssl" + (string-append "--mandir=" #$output "/share/man") + ;; PostgreSQL installs its own Makefile (should it?). + ;; Prevent it from retaining needless references to + ;; the build tools in order to save size. + "MKDIR_P=mkdir -p" "INSTALL_BIN=install -c" + "LD=ld" "TAR=tar") + #:phases + #~(modify-phases %standard-phases + (add-before 'configure 'patch-/bin/sh + (lambda _ + ;; Refer to the actual shell. + (substitute* '("src/bin/pg_ctl/pg_ctl.c" + "src/bin/psql/command.c") + (("/bin/sh") (which "sh"))))) + (add-before 'configure 'set-socket-dir + (lambda _ + (substitute* '("src/include/pg_config_manual.h") + (("DEFAULT_PGSOCKET_DIR[^\n]*") + "DEFAULT_PGSOCKET_DIR \"/var/run/postgresql\"")))) + (add-after 'build 'build-contrib + (lambda _ + (invoke "make" "-C" "contrib"))) + (add-after 'install 'install-contrib + (lambda _ + (invoke "make" "-C" "contrib" "install"))) + (add-after 'install 'install-manuals + (lambda _ + (with-directory-excursion "doc/src/sgml" + (invoke "make" "install-man") + (invoke "make" "postgres.info") + (install-file "postgres.info" + (string-append #$output "/share/info")))))))) + (native-inputs (list docbook-xml docbook2x libxml2 perl texinfo)) + (inputs (list readline `(,util-linux "lib") openssl zlib)) (home-page "https://www.postgresql.org/") (synopsis "Powerful object-relational database system") (description @@ -1215,53 +1292,121 @@ pictures, sounds, or video.") (define-public postgresql-13 (package (inherit postgresql-14) - (version "13.4") + (version "13.6") (source (origin (inherit (package-source postgresql-14)) (uri (string-append "https://ftp.postgresql.org/pub/source/v" version "/postgresql-" version ".tar.bz2")) (sha256 (base32 - "1kf0gcsrl5n25rjlvkh87aywmn28kbwvakm5c7j1qpr4j01y34za")))))) + "1z37ix80hb2bqa2smh1hbj9r507ypnl3pil43gkqznnlv6ipzz5s")) + (patches (search-patches "postgresql-riscv-spinlocks.patch")))))) (define-public postgresql-11 (package (inherit postgresql-13) (name "postgresql") - (version "11.13") + (version "11.15") (source (origin (inherit (package-source postgresql-13)) (uri (string-append "https://ftp.postgresql.org/pub/source/v" version "/postgresql-" version ".tar.bz2")) (sha256 (base32 - "0j5wnscnxa3sx8d39s55654df8aikmvkihfb0a02hrgmyygnihx0")))))) + "1qvrm0vhwnc5nijfbqybhwfjbq4r7vmk445sz7s6fiagpn78xxf8")))))) (define-public postgresql-10 (package (inherit postgresql-11) - (version "10.18") + (version "10.20") (source (origin (inherit (package-source postgresql-11)) (uri (string-append "https://ftp.postgresql.org/pub/source/v" version "/postgresql-" version ".tar.bz2")) (sha256 (base32 - "009qpb02bq0rx0aaw5ck70gk07xwparhfxvlfimgihw2vhp7qisp")))))) + "17v51a9vnz6lgbfmbdmcwsiyi572wndwa4n30nk2zr6gkgaidpl7")))))) -(define-public postgresql-9.6 +(define-public postgresql postgresql-13) + +(define-public timescaledb (package - (inherit postgresql-10) - (version "9.6.23") + (name "timescaledb") + (version "2.5.1") (source (origin - (inherit (package-source postgresql-10)) - (uri (string-append "https://ftp.postgresql.org/pub/source/v" - version "/postgresql-" version ".tar.bz2")) + (method git-fetch) + (uri (git-reference + (url "https://github.com/timescale/timescaledb") + (commit version))) + (file-name (git-file-name name version)) (sha256 (base32 - "1fa735lrmv2vrfiixg73nh024gxlagcbrssklvgwdf0s82cgfjd8")))))) - -(define-public postgresql postgresql-13) + "174dm3higa0i7al9r2hdv5hk36pd0d5fnqj57w5a350kxshxyvyw")) + (modules '((guix build utils))) + (snippet + ;; Remove files carrying the proprietary TIMESCALE license. + '(begin + (delete-file-recursively "tsl") + (for-each delete-file + '("test/perl/AccessNode.pm" + "test/perl/DataNode.pm" + "test/perl/TimescaleNode.pm")))))) + (build-system cmake-build-system) + (arguments + (list #:imported-modules `((guix build union) + ,@%cmake-build-system-modules) + #:modules `(,@%cmake-build-system-modules + (guix build union) + (ice-9 match)) + #:configure-flags #~(list "-DAPACHE_ONLY=ON" + "-DSEND_TELEMETRY_DEFAULT=OFF") + #:test-target "regresschecklocal" + #:phases + #~(modify-phases (@ (guix build cmake-build-system) %standard-phases) + (add-after 'unpack 'patch-install-location + (lambda _ + ;; Install extension to the output instead of the + ;; PostgreSQL store directory. + (substitute* '("CMakeLists.txt" + "cmake/GenerateScripts.cmake" + "sql/CMakeLists.txt") + (("\\$\\{PG_SHAREDIR\\}/extension") + (string-append #$output "/share/extension"))) + ;; Likewise for the library. + (substitute* '("src/CMakeLists.txt" + "src/loader/CMakeLists.txt") + (("\\$\\{PG_PKGLIBDIR\\}") + (string-append #$output "/lib"))))) + ;; Run the tests after install to make it easier to create the + ;; required PostgreSQL+TimescaleDB filesystem union. + (delete 'check) + (add-after 'install 'prepare-tests + (lambda* (#:key inputs #:allow-other-keys) + (let ((pg-data (string-append (getcwd) "/../pg-data")) + (pg-union (string-append (getcwd) "/../pg-union"))) + (match inputs + (((names . directories) ...) + (union-build pg-union (cons #$output directories)))) + (setenv "PATH" (string-append pg-union "/bin:" + (getenv "PATH"))) + (invoke "initdb" "-D" pg-data) + (copy-file "test/postgresql.conf" + (string-append pg-data "/postgresql.conf")) + (invoke "pg_ctl" "-D" pg-data + "-o" (string-append "-k " pg-data) + "-l" (string-append pg-data "/db.log") + "start")))) + (add-after 'prepare-tests 'check + (assoc-ref %standard-phases 'check))))) + (inputs (list openssl postgresql)) + (home-page "https://www.timescale.com/") + (synopsis "Time-series extension for PostgreSQL") + (description + "TimescaleDB is an database designed to make SQL scalable for +time-series data. It is engineered up from PostgreSQL and packaged as a +PostgreSQL extension, providing automatic partitioning across time and space +(partitioning key), as well as full SQL support.") + (license license:asl2.0))) (define-public pgloader (package @@ -2321,6 +2466,55 @@ one-to-one, while still providing an idiomatic interface.") (home-page "https://github.com/redis/redis-rb") (license license:expat))) +(define-public go-github-com-cupcake-rdb + (package + (name "go-github-com-cupcake-rdb") + (version "0.0.0-20161107195141-43ba34106c76") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/tent/rdb") + (commit (go-version->git-ref version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1l4bsn5yj8r875crz1rsk6dlvhv0bd8mgazsch5vl4c19v0fs2ib")))) + (build-system go-build-system) + (arguments '(#:import-path "github.com/cupcake/rdb")) + (native-inputs + (list go-gopkg-in-check-v1)) + (home-page "https://github.com/tent/rdb") + (synopsis "Redis RDB parser for Go") + (description + "Package rdb implements parsing and encoding of the Redis RDB file format.") + (license license:expat))) + +(define-public go-github-com-gomodule-redigo + (package + (name "go-github-com-gomodule-redigo") + (version "1.8.8") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/gomodule/redigo") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0wplaaxg7f6c6c08gdp33l48hygn8gq1rhlnjzr1c9qcggsm07k1")))) + (build-system go-build-system) + (arguments + '(#:unpack-path "github.com/gomodule/redigo" + #:import-path "github.com/gomodule/redigo/redis")) + (native-inputs + (list go-github-com-stretchr-testify + redis)) + (home-page "https://github.com/gomodule/redigo") + (synopsis "Go client for Redis") + (description + "Redigo is a Go client for the Redis database.") + (license license:asl2.0))) + (define-public kyotocabinet (package (name "kyotocabinet") @@ -2455,7 +2649,7 @@ trees (LSM), for sustained throughput under random insert workloads.") (inputs (list wiredtiger-3 guile-2.2)) (propagated-inputs - (list guile-bytestructures)) + (list guile2.2-bytestructures)) (synopsis "WiredTiger bindings for GNU Guile") (description "This package provides Guile bindings to the WiredTiger ``NoSQL'' @@ -2610,6 +2804,34 @@ on another machine, accessed via TCP/IP.") (home-page "http://pqxx.org/") (license license:bsd-3))) +(define-public go-go-etcd-io-bbolt + (package + (name "go-go-etcd-io-bbolt") + (version "1.3.6") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/etcd-io/bbolt") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0pj5245d417za41j6p09fmkbv05797vykr1bi9a6rnwddh1dbs8d")))) + (build-system go-build-system) + (arguments + `(#:import-path "go.etcd.io/bbolt" + ;; Extending the test timeout to 30 minutes still times out on aarch64. + #:tests? ,(not target-arm?))) + (propagated-inputs + (list go-golang-org-x-sys)) + (home-page "https://go.etcd.io/bbolt") + (synopsis "Embedded key/value database for Go") + (description "Bolt is a pure Go key/value store inspired by Howard Chu's +LMDB project. The goal of the project is to provide a simple, fast, and +reliable database for projects that don't require a full database server such as +Postgres or MySQL.") + (license license:expat))) + (define-public python-peewee (package (name "python-peewee") @@ -2917,6 +3139,30 @@ etc., and an SQL engine for performing simple SQL queries.") (license (list license:lgpl2.0 license:gpl2+)))) +(define-public go-gopkg-in-mgo-v2 + (package + (name "go-gopkg-in-mgo-v2") + (version "2.0.0-20190816093944-a6b53ec6cb22") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://gopkg.in/mgo.v2") + (commit (go-version->git-ref version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1lgvwxsbmdrf4938qkxl56wbwgbphk2qqnmpf73qdmlv4qsg14na")))) + (build-system go-build-system) + (arguments + '(#:tests? #f ; Tests try to use a running mongodb server. + #:import-path "gopkg.in/mgo.v2")) + (native-inputs + (list go-gopkg-in-check-v1)) + (home-page "https://gopkg.in/mgo.v2") + (synopsis "MongoDB driver for Go") + (description "This package provides a MongoDB driver for Go.") + (license license:bsd-2))) + (define-public python-lmdb (package (name "python-lmdb") @@ -3318,7 +3564,8 @@ PickleShare.") (modify-phases %standard-phases (replace 'build (lambda _ - (invoke "python" "setup.py" "build" "--enable-all-extensions") + (invoke "python" "setup.py" "build" "--enable-all-extensions" + "--enable=load_extension") #t)) (add-after 'build 'build-test-helper (lambda _ @@ -3894,7 +4141,7 @@ the SQL language using a syntax that reflects the resulting query.") (define-public apache-arrow (package (name "apache-arrow") - (version "6.0.1") + (version "7.0.0") (source (origin (method git-fetch) @@ -3904,7 +4151,7 @@ the SQL language using a syntax that reflects the resulting query.") (file-name (git-file-name name version)) (sha256 (base32 - "0mcw361akqw4sxnnpnr9c9v1zk4hphk6gcq763pcb19yzljh88ig")))) + "19xx6mlddca79q6d3wga574m4y32ixmxx2rmk6j3f22i5c37mjzw")))) (build-system cmake-build-system) (arguments `(#:tests? #f @@ -4319,3 +4566,48 @@ a handy text editor with language recognition, and visualize SELECT results in a Gtk.Grid Widget.") (home-page "https://github.com/Alecaddd/sequeler") (license license:gpl2+))) + +(define-public sqlitebrowser + (package + (name "sqlitebrowser") + (version "3.12.2") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/sqlitebrowser/sqlitebrowser") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1ljqzcx388mmni8lv9jz5r58alhsjrrqi4nzjnbfki94rn4ray6z")) + (modules '((guix build utils))) + (snippet + '(begin + (delete-file-recursively "libs/qcustomplot-source/") + (delete-file-recursively "libs/qhexedit/") + (delete-file-recursively "libs/qscintilla"))))) + (build-system qt-build-system) + (arguments + (list #:configure-flags + ;; TODO: Unbundle json (json-modern-cxx). + #~(list (string-append "-DQSCINTILLA_INCLUDE_DIR=" + #$(this-package-input "qscintilla") + "/include/Qsci") + "-DFORCE_INTERNAL_QCUSTOMPLOT=OFF" + "-DFORCE_INTERNAL_QHEXEDIT=OFF" + "-DENABLE_TESTING=ON"))) + (inputs + (list qcustomplot + qhexedit + qscintilla + qtbase-5 + sqlite)) + (native-inputs (list qttools)) + (home-page "https://sqlitebrowser.org/") + (synopsis "Database browser for SQLite") + (description "Sqlitebrowser is a high quaility, visual, open source tool to +create design, and edit database file compatible with SQLite.") + (license + ;; dual license + (list license:gpl3+ + license:mpl2.0)))) |