diff options
Diffstat (limited to 'gnu/packages/graph.scm')
| -rw-r--r-- | gnu/packages/graph.scm | 77 |
1 files changed, 59 insertions, 18 deletions
diff --git a/gnu/packages/graph.scm b/gnu/packages/graph.scm index 560764bb33..b719b1be42 100644 --- a/gnu/packages/graph.scm +++ b/gnu/packages/graph.scm @@ -1,5 +1,5 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2017, 2018, 2019, 2020, 2022 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2017, 2018, 2019, 2020, 2022, 2023 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com> ;;; Copyright © 2018, 2020, 2022 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2019, 2021, 2022 Efraim Flashner <efraim@flashner.co.il> @@ -230,24 +230,30 @@ lines.") "0kc9v5ampq2paw6sls6zdchvqvis7b1z8xhdvlhz5xxdr1vj5xnn")))) (build-system python-build-system) (arguments - `(#:phases - (modify-phases %standard-phases + (list + #:phases + #~(modify-phases %standard-phases (add-before 'build 'skip-npm ;; npm is not packaged so build without it (lambda _ (setenv "SKIP_NPM" "T"))) - (add-after 'unpack 'chdir - (lambda _ - (chdir "packages/python/plotly") - #t)) - (replace 'check - (lambda* (#:key tests? #:allow-other-keys) - (when tests? - (invoke "pytest" "-x" "plotly/tests/test_core") - (invoke "pytest" "-x" "plotly/tests/test_io") - ;; FIXME: Add optional dependencies and enable their tests. - ;; (invoke "pytest" "-x" "plotly/tests/test_optional") - (invoke "pytest" "_plotly_utils/tests"))))))) + (add-after 'unpack 'fix-version + ;; Versioneer is useless when there is no git metadata. + (lambda _ + (substitute* "packages/python/plotly/setup.py" + (("version=versioneer.get_version\\(),") + (format #f "version=~s," #$version))))) + (add-after 'fix-version 'chdir + (lambda _ + (chdir "packages/python/plotly"))) + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-x" "plotly/tests/test_core") + (invoke "pytest" "-x" "plotly/tests/test_io") + ;; FIXME: Add optional dependencies and enable their tests. + ;; (invoke "pytest" "-x" "plotly/tests/test_optional") + (invoke "pytest" "_plotly_utils/tests"))))))) (native-inputs (list python-ipywidgets python-pytest python-xarray)) (propagated-inputs @@ -311,6 +317,41 @@ subplots, multiple-axes, polar charts, and bubble charts.") algorithm for community detection in large networks.") (license license:bsd-3))) +(define-public python-vtraag-louvain + (package + (name "python-vtraag-louvain") + (version "0.8.0") + (source (origin + (method url-fetch) + (uri (pypi-uri "louvain" version)) + (sha256 + (base32 + "16l2zi4jwc3vpvpnz32jv7xy0g5087dp9y57wxplj1xa9r312x0i")))) + (build-system pyproject-build-system) + (arguments + (list + #:phases + '(modify-phases %standard-phases + (add-after 'unpack 'do-not-use-bundled-igraph + (lambda _ + (substitute* "setup.py" + (("self.external = False") + "self.external = True") + (("self.use_pkgconfig = False") + "self.use_pkgconfig = True"))))))) + (inputs (list igraph)) + (propagated-inputs (list python-igraph)) + (native-inputs + (list pkg-config + python-ddt + python-setuptools-scm)) + (home-page "https://github.com/vtraag/louvain") + (synopsis "Community detection in large networks") + (description + "Louvain is a general algorithm for methods of community detection in +large networks.") + (license license:gpl3+))) + (define-public faiss (package (name "faiss") @@ -555,7 +596,7 @@ of graphs.") (list pkg-config)) (inputs (list gd)) - (home-page "http://www.mcternan.me.uk/mscgen/") + (home-page "https://www.mcternan.me.uk/mscgen/") (synopsis "Message Sequence Chart Generator") (description "Mscgen is a small program that parses Message Sequence Chart descriptions and produces PNG, SVG, EPS or server side image maps (ismaps) as @@ -570,7 +611,7 @@ transformed into common image formats for display or printing.") (define-public python-graph-tool (package (name "python-graph-tool") - (version "2.45") + (version "2.46") (source (origin (method url-fetch) (uri (string-append @@ -578,7 +619,7 @@ transformed into common image formats for display or printing.") version ".tar.bz2")) (sha256 (base32 - "0s46qqg454kwq2px7x1a4ckryclkxnrz1r7gj6bv40nsrynafbgr")))) + "0x9jgnq9xcja3q954y7nhdzd374p4h203pymxh51b6lqqbq0hm9h")))) (build-system gnu-build-system) (arguments `(#:imported-modules (,@%gnu-build-system-modules |