diff options
Diffstat (limited to 'gnu/packages/maths.scm')
| -rw-r--r-- | gnu/packages/maths.scm | 152 |
1 files changed, 148 insertions, 4 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index 246f189115..0f4d29b40f 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -137,6 +137,7 @@ #:use-module (gnu packages gtk) #:use-module (gnu packages icu4c) #:use-module (gnu packages image) + #:use-module (gnu packages image-processing) #:use-module (gnu packages java) #:use-module (gnu packages less) #:use-module (gnu packages lisp) @@ -164,6 +165,8 @@ #:use-module (gnu packages pkg-config) #:use-module (gnu packages pulseaudio) #:use-module (gnu packages python) + #:use-module (gnu packages python-build) + #:use-module (gnu packages python-science) #:use-module (gnu packages python-web) #:use-module (gnu packages python-xyz) #:use-module (gnu packages qt) @@ -173,6 +176,7 @@ #:use-module (gnu packages scheme) #:use-module (gnu packages serialization) #:use-module (gnu packages shells) + #:use-module (gnu packages simulation) #:use-module (gnu packages sphinx) #:use-module (gnu packages sqlite) #:use-module (gnu packages swig) @@ -2917,7 +2921,7 @@ can solve two kinds of problems: (define-public octave-cli (package (name "octave-cli") - (version "8.3.0") + (version "8.4.0") (source (origin (method url-fetch) @@ -2925,7 +2929,7 @@ can solve two kinds of problems: version ".tar.xz")) (sha256 (base32 - "1aav8i88y2yl11g5d44wpjngkpldvzk90ja7wghkb91cy2a9974i")))) + "1a58zyrl1lx6b6wr2jbf6w806vjxr3jzbh6n85iinag47qxdg6kg")))) (build-system gnu-build-system) (inputs (list alsa-lib @@ -3650,6 +3654,146 @@ Cassowary solver with typical use cases gaining a 40x improvement. Memory savings are consistently > 5x.") (license license:bsd-3))) +(define-public python-accupy + (package + (name "python-accupy") + (version "0.3.6") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/diego-hayashi/accupy") + (commit version))) + (file-name (git-file-name name version)) + (sha256 + (base32 "0sxkwpp2xy2jgakhdxr4nh1cspqv8l89kz6s832h05pbpyc0n767")) + (patches (search-patches "python-accupy-use-matplotx.patch" + "python-accupy-fix-use-of-perfplot.patch")))) + (build-system pyproject-build-system) + (arguments + (list + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'set-eigen-include-dir + (lambda _ + (substitute* "setup.py" + (("include_dirs=\\[\"\\/usr\\/include\\/eigen3\\/\"\\]," _) + (string-append "include_dirs=[\"" + #$(file-append (this-package-input "eigen") + "/include/eigen3/") + "\"],")))))))) + (propagated-inputs (list eigen python-mpmath python-pyfma)) + (native-inputs (list pybind11 + python-matplotx + python-perfplot + python-pytest)) + (home-page "https://github.com/diego-hayashi/accupy") + (synopsis "Accurate calculation of sums and dot products") + (description + "@code{accupy} is a Python library for accurately computing sums +and (dot) products. It implements Kahan summation, Shewchuck's +algorithm and summation in K-fold precision.") + (license license:gpl3+))) + +(define-public python-ndim + (package + (name "python-ndim") + (version "0.1.6") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/diego-hayashi/ndim") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "1hri82k7pcpw9dns8l1f2asa3dm7hjv71wnxi3752258ia2qa44v")))) + (build-system pyproject-build-system) + (propagated-inputs (list python-sympy)) + (native-inputs (list python-flit-core python-pytest)) + (home-page "https://github.com/diego-hayashi/ndim") + (synopsis "Multidimensional volumes and monomial integrals") + (description + "@code{ndim} computes all kinds of volumes and integrals of +monomials over such volumes in a fast, numerically stable way, using +recurrence relations.") + (license license:gpl3+))) + +(define-public python-orthopy + (package + (name "python-orthopy") + (version "0.9.5") + (source + (origin + (method git-fetch) + (uri (git-reference + (url "https://github.com/diego-hayashi/orthopy") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 "00s2rwjdlq38zkf7wl1gvm2aw057r30266lkzfxkrfzr4i705xnq")))) + (build-system pyproject-build-system) + (propagated-inputs + (list python-importlib-metadata + python-ndim + python-numpy + python-sympy)) + (native-inputs (list ;python-cplot ;only used in deselected tests + python-matplotx + python-meshio + python-meshzoo + python-pytest + python-scipy)) + (arguments + (list + #:test-flags + ;; These tests fails with unexpected keyword arguments + ;; in calls to cplot. + #~(list "--deselect" "tests/test_u3.py::test_write_single" + "--deselect" "tests/test_u3.py::test_write_tree"))) + (home-page "https://github.com/diego-hayashi/orthopy") + (synopsis "Tools for orthogonal polynomials, Gaussian quadrature") + (description "@code{orthopy} provides various orthogonal polynomial +classes for lines, triangles, quadrilaterals, disks, spheres, hexahedra, +and n-cubes. All computations are done using numerically stable +recurrence schemes. Furthermore, all functions are fully vectorized and +can return results in exact arithmetic.") + (license license:gpl3+))) + +(define-public python-quadpy + (package + (name "python-quadpy") + (version "0.16.10") + (source + (origin + (method url-fetch) + ; Download zipfile from zenodo, because git checkout is missing + ; some data files that are stored via git-lfs. + (uri (string-append + "https://zenodo.org/records/5541216/files/nschloe/quadpy-v" + version + ".zip")) + (sha256 + (base32 + "1f989dipv7lqxvalfrvvlmhlxyl67a87lavyyqrr1mh88glhl592")))) + (build-system pyproject-build-system) + (propagated-inputs + (list python-importlib-metadata + python-numpy + python-orthopy + python-scipy + python-sympy)) + (native-inputs (list python-accupy python-pytest unzip vtk)) + (home-page "https://github.com/diego-hayashi/quadpy") + (synopsis "Numerical integration, quadrature for various domains") + (description + "More than 1500 numerical integration schemes for line segments, circles, +disks, triangles, quadrilaterals, spheres, balls, tetrahedra, hexahedra, +wedges, pyramids, n-spheres, n-balls, n-cubes, n-simplices, and the +1D/2D/3D/nD spaces with weight functions exp(-r) and exp(-r2) for fast +integration of real-, complex-, and vector-valued functions.") + (license license:gpl3+))) + (define-public slepc (package (name "slepc") @@ -4746,7 +4890,7 @@ point numbers.") (define-public wxmaxima (package (name "wxmaxima") - (version "22.12.0") + (version "23.11.0") (source (origin (method git-fetch) (uri (git-reference @@ -4755,7 +4899,7 @@ point numbers.") (file-name (git-file-name name version)) (sha256 (base32 - "12bjadmy2mf7d8v4iszmzckahfcwjzaba8wpbigksh4brvhb4gj5")))) + "0xj91wfkm19avwmpcfwgzdkcqjwfpkl3glhkpn4advsqc6sx3ra0")))) (build-system cmake-build-system) (native-inputs (list gettext-minimal)) (inputs (list bash-minimal |