diff options
Diffstat (limited to 'gnu/packages/maths.scm')
| -rw-r--r-- | gnu/packages/maths.scm | 141 |
1 files changed, 130 insertions, 11 deletions
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm index 640d502783..fe87e6d25a 100644 --- a/gnu/packages/maths.scm +++ b/gnu/packages/maths.scm @@ -1,6 +1,7 @@ ;;; GNU Guix --- Functional package management for GNU ;;; Copyright © 2013 Andreas Enge <andreas@enge.fr> ;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org> +;;; Copyright © 2014 John Darrington <jmd@gnu.org> ;;; ;;; This file is part of GNU Guix. ;;; @@ -26,15 +27,25 @@ #:use-module (guix build-system cmake) #:use-module (guix build-system gnu) #:use-module (gnu packages compression) + #:use-module (gnu packages curl) + #:use-module (gnu packages fltk) #:use-module (gnu packages fontutils) #:use-module (gnu packages gettext) #:use-module (gnu packages gcc) + #:use-module (gnu packages gd) + #:use-module (gnu packages ghostscript) #:use-module (gnu packages gtk) + #:use-module (gnu packages less) + #:use-module (gnu packages xorg) + #:use-module (gnu packages gl) #:use-module (gnu packages multiprecision) + #:use-module (gnu packages pcre) #:use-module (gnu packages perl) #:use-module (gnu packages pkg-config) #:use-module (gnu packages python) #:use-module (gnu packages readline) + #:use-module (gnu packages texinfo) + #:use-module (gnu packages texlive) #:use-module (gnu packages xml)) (define-public units @@ -163,7 +174,7 @@ output in text, PostScript, PDF or HTML.") (define-public lapack (package (name "lapack") - (version "3.4.2") + (version "3.5.0") (source (origin (method url-fetch) @@ -171,16 +182,7 @@ output in text, PostScript, PDF or HTML.") version ".tgz")) (sha256 (base32 - "1w7sf8888m7fi2kyx1fzgbm22193l8c2d53m8q1ibhvfy6m5v9k0")) - (snippet - ;; Remove non-free files. - ;; See <http://icl.cs.utk.edu/lapack-forum/archives/lapack/msg01383.html>. - '(for-each (lambda (file) - (format #t "removing '~a'~%" file) - (delete-file file)) - '("lapacke/example/example_DGESV_rowmajor.c" - "lapacke/example/example_ZGESV_rowmajor.c" - "DOCS/psfig.tex"))))) + "0lk3f97i9imqascnlf6wr5mjpyxqcdj73pgj97dj2mgvyg9z1n4s")))) (build-system cmake-build-system) (home-page "http://www.netlib.org/lapack/") (inputs `(("fortran" ,gfortran-4.8) @@ -202,3 +204,120 @@ output in text, PostScript, PDF or HTML.") problems in numerical linear algebra.") (license (license:bsd-style "file://LICENSE" "See LICENSE in the distribution.")))) + +(define-public gnuplot + (package + (name "gnuplot") + (version "4.6.3") + (source + (origin + (method url-fetch) + (uri (string-append "mirror://sourceforge/gnuplot/gnuplot/" + version "/gnuplot-" version ".tar.gz")) + (sha256 + (base32 + "1xd7gqdhlk7k1p9yyqf9vkk811nadc7m4si0q3nb6cpv4pxglpyz")))) + (build-system gnu-build-system) + (inputs `(("readline" ,readline) + ("cairo" ,cairo) + ("pango" ,pango) + ("gd" ,gd))) + (native-inputs `(("texlive" ,texlive) + ("pkg-config" ,pkg-config))) + (home-page "http://www.gnuplot.info") + (synopsis "Command-line driven graphing utility") + (description "Gnuplot is a portable command-line driven graphing +utility. It was originally created to allow scientists and students to +visualize mathematical functions and data interactively, but has grown to +support many non-interactive uses such as web scripting. It is also used as a +plotting engine by third-party applications like Octave.") + ;; X11 Style with the additional restriction that derived works may only be + ;; distributed as patches to the original. + (license (license:fsf-free + "http://gnuplot.cvs.sourceforge.net/gnuplot/gnuplot/Copyright")))) + +(define-public hdf5 + (package + (name "hdf5") + (version "1.8.12") + (source + (origin + (method url-fetch) + (uri (string-append "http://www.hdfgroup.org/ftp/HDF5/current/src/hdf5-" + version ".tar.bz2")) + (sha256 + (base32 "0f9n0v3p3lwc7564791a39c6cn1d3dbrn7d1j3ikqsi27a8hy23d")))) + (build-system gnu-build-system) + (arguments + `(#:phases + (alist-replace + 'configure + (lambda* (#:key target system outputs #:allow-other-keys #:rest args) + (let ((configure (assoc-ref %standard-phases 'configure))) + (substitute* "configure" + (("/bin/mv") "mv")) + (apply configure args))) + %standard-phases))) + (outputs '("out" "bin" "lib" "include")) + (home-page "http://www.hdfgroup.org") + (synopsis "Management suite for extremely large and complex data") + (description "HDF5 is a suite that makes possible the management of +extremely large and complex data collections.") + (license (license:x11-style "http://www.hdfgroup.org/ftp/HDF5/current/src/unpacked/COPYING")))) + + +;; For a fully featured Octave, users are strongly recommended also to install +;; the following packages: texinfo, less, ghostscript, gnuplot. +(define-public octave + (package + (name "octave") + (version "3.8.0") + (source + (origin + (method url-fetch) + (uri (string-append "mirror://gnu/octave/octave-" + version ".tar.gz")) + (sha256 + (base32 + "0ks9pr154syw0vb3jn6xsnrkkrbvf9y7i7gaxa28rz6ngxbxvq9l")))) + (build-system gnu-build-system) + (inputs + `(("lapack" ,lapack) + ("readline" ,readline) + ("glpk" ,glpk) + ("curl" ,curl) + ("pcre" ,pcre) + ("fltk" ,fltk) + ("fontconfig" ,fontconfig) + ("freetype" ,freetype) + ("hdf5-lib" ,hdf5 "lib") + ("hdf5-include" ,hdf5 "include") + ("libxft" ,libxft) + ("mesa" ,mesa) + ("zlib" ,zlib))) + (native-inputs + `(("gfortran" ,gfortran-4.8) + ("pkg-config" ,pkg-config) + ("perl" ,perl) + ;; The following inputs are not actually used in the build process. However, the + ;; ./configure gratuitously tests for their existence and assumes that programs not + ;; present at build time are also not, and can never be, available at run time! + ;; If these inputs are therefore not present, support for them will be built out. + ;; However, Octave will still run without them, albeit without the features they + ;; provide. + ("less" ,less) + ("texinfo" ,texinfo) + ("ghostscript" ,ghostscript) + ("gnuplot" ,gnuplot))) + (arguments + `(#:configure-flags (list (string-append "--with-shell=" + (assoc-ref %build-inputs "bash") + "/bin/sh")))) + (home-page "http://www.gnu.org/software/octave/") + (synopsis "High-level language for numerical computation") + (description "GNU Octave is a high-level interpreted language that is specialized +for numerical computations. It can be used for both linear and non-linear +applications and it provides great support for visualizing results. Work may +be performed both at the interactive command-line as well as via script +files.") + (license license:gpl3+))) |