diff options
Diffstat (limited to 'gnu/packages/python-check.scm')
| -rw-r--r-- | gnu/packages/python-check.scm | 351 |
1 files changed, 319 insertions, 32 deletions
diff --git a/gnu/packages/python-check.scm b/gnu/packages/python-check.scm index 0e20d08e32..7f9b027a30 100644 --- a/gnu/packages/python-check.scm +++ b/gnu/packages/python-check.scm @@ -1,8 +1,8 @@ ;;; GNU Guix --- Functional package management for GNU -;;; Copyright © 2019, 2021 Ricardo Wurmus <rekado@elephly.net> +;;; Copyright © 2019, 2021, 2022 Ricardo Wurmus <rekado@elephly.net> ;;; Copyright © 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr> ;;; Copyright © 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il> -;;; Copyright © 2019, 2020, 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com> +;;; Copyright © 2019, 2020, 2021, 2022 Maxim Cournoyer <maxim.cournoyer@gmail.com> ;;; Copyright © 2019, 2021 Hartmut Goebel <h.goebel@crazy-compilers.com> ;;; Copyright © 2020 Julien Lepiller <julien@lepiller.eu> ;;; Copyright © 2020, 2022 Marius Bakke <marius@gnu.org> @@ -11,8 +11,10 @@ ;;; Copyright © 2020 Tanguy Le Carrour <tanguy@bioneland.org> ;;; Copyright © 2021 Sharlatan Hellseher <sharlatanus@gmail.com> ;;; Copyright © 2021 Brendan Tildesley <mail@brendan.scot> -;;; Copyright © 2021 Guillaume Le Vaillant <glv@posteo.net> +;;; Copyright © 2021, 2022 Guillaume Le Vaillant <glv@posteo.net> ;;; Copyright © 2021 Bonface Munyoki Kilyungi <me@bonfacemunyoki.com> +;;; Copyright © 2022 Malte Frank Gerdes <malte.f.gerdes@gmail.com> +;;; Copyright © 2022 Felix Gruber <felgru@posteo.net> ;;; ;;; This file is part of GNU Guix. ;;; @@ -31,9 +33,14 @@ (define-module (gnu packages python-check) #:use-module (gnu packages) + #:use-module (gnu packages admin) + #:use-module (gnu packages base) + #:use-module (gnu packages bash) #:use-module (gnu packages check) + #:use-module (gnu packages docker) #:use-module (gnu packages django) #:use-module (gnu packages openstack) + #:use-module (gnu packages perl) #:use-module (gnu packages python-build) #:use-module (gnu packages python-web) #:use-module (gnu packages python-xyz) @@ -68,6 +75,38 @@ Protocol (TAP) in Python. TAP is a line based test protocol for recording test data in a standard way.") (license license:bsd-3))) +(define-public python-beartype + (package + (name "python-beartype") + (version "0.10.4") + (source + (origin + (method url-fetch) + (uri (pypi-uri "beartype" version)) + (sha256 + (base32 "0amzckgw9c93bl4jf0q6322j9wyyf3i8vl03yixfkrpllzv6kv14")))) + (build-system python-build-system) + (arguments + (list #:phases + #~(modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-vv" "beartype_test" + ;; These tests rely on git through the + ;; "get_main_readme_file" helper. + "-k" + (string-append "not test_doc_readme " + "and not test_sphinx " + "and not test_pep561_mypy")))))))) + (native-inputs + (list python-pytest)) + (home-page "https://github.com/beartype/beartype") + (synopsis "Fast runtime type checking for Python") + (description "Beartype aims to be a very fast runtime type checking tool +written in pure Python.") + (license license:expat))) + (define-public python-pytest-click (package (name "python-pytest-click") @@ -244,6 +283,36 @@ nosetests, etc...) in Python projects.") result documents that can be read by tools such as Jenkins or Bamboo.") (license license:expat)))) +(define-public python-pyinstrument + (package + (name "python-pyinstrument") + (version "4.1.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "pyinstrument" version)) + (sha256 + (base32 "18n3waxsxcd48pmcp8158s5rlancll2000amrdck9zfj5hfpkhhx")))) + (build-system python-build-system) + (native-inputs + (list python-flaky + python-pytest + python-pytest-asyncio + python-pytest-trio)) + (arguments + `(;; TODO: Get tests to work. + #:tests? #f + #:phases (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-vv"))))))) + (home-page "https://github.com/joerick/pyinstrument") + (synopsis "Call stack profiler for Python") + (description + "Pyinstrument is a Python profiler to help you optimize your code.") + (license license:bsd-3))) + (define-public python-vcrpy (package (name "python-vcrpy") @@ -889,18 +958,21 @@ doctest to render the object representations.") (define-public python-pytest-checkdocs (package (name "python-pytest-checkdocs") - (version "1.2.5") + (version "2.7.1") (source (origin (method url-fetch) (uri (pypi-uri "pytest-checkdocs" version)) (sha256 - (base32 "0m4kn7141i6k8qr8ak3lbmk9vim11xsrlnrggcfwczfrglc6jmia")))) + (base32 "1bn1wr3yz8avkwacffyh26za7mg20f9pajpakfk4cn7yvmgbhcrb")))) (build-system python-build-system) + (arguments (list #:tests? #f)) ;no tests in pypi archive (propagated-inputs - (list python-docutils python-importlib-metadata python-more-itertools)) - (native-inputs - (list python-setuptools-scm python-pytest)) + (list python-docutils + python-importlib-metadata + python-pep517 + python-pytest)) + (native-inputs (list python-setuptools-scm)) (home-page "https://github.com/jaraco/pytest-checkdocs") (synopsis "Check the README when running tests") (description @@ -1045,6 +1117,12 @@ isort.") (arguments `(#:phases (modify-phases %standard-phases + (add-after 'unpack 'use-path-instead-of-path.py + ;; path.py is obsolete. + (lambda _ + (substitute* "setup.py" + (("'path.py'") + "'path'")))) (add-after 'unpack 'patch-tests (lambda _ (mkdir "/tmp/bin") @@ -1052,11 +1130,9 @@ isort.") (("dirname = '/bin'") "dirname = '/tmp/bin'") (("bindir = os.path.realpath\\('/bin'\\)") - "bindir = os.path.realpath('/tmp/bin')")) - #t))))) + "bindir = os.path.realpath('/tmp/bin')"))))))) (propagated-inputs - (list python-contextlib2 python-execnet python-pathpy - python-termcolor)) + (list python-contextlib2 python-execnet python-path python-termcolor)) (native-inputs (list python-mock python-pytest python-setuptools-git)) (home-page "https://github.com/manahl/pytest-plugins") @@ -1303,17 +1379,21 @@ new fixtures, new methods and new comparison objects.") (lambda _ ;; This test fails because of a mismatch in the output of LaTeX ;; equation environments. Seems OK to skip. - (delete-file "tests/ipynb-test-samples/test-latex-pass-correctouput.ipynb") - #t)) + (delete-file + "tests/ipynb-test-samples/test-latex-pass-correctouput.ipynb"))) (replace 'check - (lambda* (#:key inputs outputs #:allow-other-keys) - (add-installed-pythonpath inputs outputs) - (invoke "pytest" "-vv" "-k" - (string-append - ;; This only works with Pytest < 5. - "not nbdime_reporter" - ;; https://github.com/computationalmodelling/nbval/pull/148. - " and not test_timeouts"))))))) + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-vv" "-k" + (string-append + ;; This only works with Pytest < 5. + "not nbdime_reporter" + ;; https://github.com/computationalmodelling/nbval/pull/148. + " and not test_timeouts" + ;; It seems the output format has changed; the following + ;; test fails with "Unexpected output fields from + ;; running code: {'text/plain'}". + " and not test_conf_ignore_stderr ")))))))) (native-inputs (list python-pytest python-pytest-cov python-sympy)) (propagated-inputs @@ -1381,6 +1461,36 @@ also ensuring that the notebooks are running without errors.") "This package provides a pytest plugin for testing console scripts.") (license license:expat))) +(define-public python-pytest-tornado + (package + (name "python-pytest-tornado") + (version "0.8.1") + (source (origin + (method git-fetch) ;no tests in pypi archive + (uri (git-reference + (url "https://github.com/eugeniy/pytest-tornado") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "05hgq1m9g35kpc01im7ci1wd85xi1rdxnyms9izjg65c9976zn6x")))) + (build-system python-build-system) + (arguments + (list + #:phases + #~(modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest" "-vv"))))))) + (propagated-inputs (list python-pytest python-setuptools python-tornado)) + (home-page "https://github.com/eugeniy/pytest-tornado") + (synopsis "Pytest plugin to ease testing tornado applications") + (description + "This package provides a py.test plugin providing fixtures and markers to +simplify testing of asynchronous tornado applications.") + (license license:asl2.0))) + (define-public python-pytest-tornasync (package (name "python-pytest-tornasync") @@ -1641,7 +1751,7 @@ supported by the MyPy typechecker.") (define-public python-mypy (package (name "python-mypy") - (version "0.931") + (version "0.942") (source (origin ;; Because of https://github.com/python/mypy/issues/9584, the @@ -1658,9 +1768,10 @@ supported by the MyPy typechecker.") (file-name (git-file-name name version)) (sha256 (base32 - "1v83flrdxh8grcp40qw04q4hzjflih9xwib64078vsxv2w36f817")) + "0hxnrqhvskiclwfj2s4gyfclzjas1dvpfxhyng8v7mq38rqps1j5")) (patches - (search-patches "python-mypy-12332.patch")))) + (search-patches "python-mypy-12332.patch" + "python-mypy-use-sys-path.patch")))) (build-system python-build-system) (arguments `(#:phases @@ -1682,10 +1793,10 @@ supported by the MyPy typechecker.") (home-page "http://www.mypy-lang.org/") (synopsis "Static type checker for Python") (description "Mypy is an optional static type checker for Python that aims -to combine the benefits of dynamic (or 'duck') typing and static typing. Mypy combines +to combine the benefits of dynamic typing and static typing. Mypy combines the expressive power and convenience of Python with a powerful type system and -compile-time type checking. Mypy type checks standard Python programs; run them using -any Python VM with basically no runtime overhead.") +compile-time type checking. Mypy type checks standard Python programs; run +them using any Python VM with basically no runtime overhead.") ;; Most of the code is under MIT license; Some files are under Python Software ;; Foundation License version 2: stdlib-samples/*, mypyc/lib-rt/pythonsupport.h and ;; mypyc/lib-rt/getargs.c @@ -1705,6 +1816,40 @@ any Python VM with basically no runtime overhead.") (delete 'ensure-no-mtimes-pre-1980)))) (native-inputs '())))) +(define-public python-nptyping + (package + (name "python-nptyping") + (version "2.0.0") + (source (origin + (method git-fetch) ;pypi only contains a binary wheel + (uri (git-reference + (url "https://github.com/ramonhagenaars/nptyping") + (commit (string-append "v" version)))) + (file-name (git-file-name name version)) + (sha256 + (base32 + "0839mcrv5jljq9k9124ssnl1hc1inbxwlwjk72imabsbqssjy9rb")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (add-before 'build 'set-source-date-epoch + (lambda _ + ;; Otherwise the wheel building test would fail with "ZIP does + ;; not support timestamps before 1980". + (setenv "SOURCE_DATE_EPOCH" "315532800")))))) + (native-inputs + (list python-beartype + python-mypy + python-typeguard + python-wheel)) + (propagated-inputs (list python-numpy python-typing-extensions)) + (home-page "https://github.com/ramonhagenaars/nptyping") + (synopsis "Type hints for Numpy") + (description "This package provides extensive dynamic type checks for +dtypes and shapes of arrays for NumPy, extending @code{numpy.typing}.") + (license license:expat))) + (define-public python-pylama (package (name "python-pylama") @@ -1845,13 +1990,13 @@ help in debugging failures and optimizing the scheduler to improve speed.") (define-public python-pytest-sanic (package (name "python-pytest-sanic") - (version "1.7.0") + (version "1.9.1") (source (origin (method url-fetch) (uri (pypi-uri "pytest-sanic" version)) (sha256 (base32 - "0hm7im77dgqfk8k34qbbfhimg8hifl4zwpa2s3mgbknrjvyw5qpx")))) + "0shq1bqnydj0l3ipb73j1qh5kqcjvzkps30zk8grq3dwmh3wmnkr")))) (build-system python-build-system) (arguments ;; Tests depend on python-sanic. @@ -1962,6 +2107,102 @@ The purpose of this package is to provide an easy way to test asynchronous HTTP requests.") (license license:expat))) +(define-public python-avocado-framework + (package + (name "python-avocado-framework") + (version "96.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "avocado-framework" version)) + (sha256 + (base32 "0zhz6423p0b5gqx2mvg7dmq8m9gbsay7wqjdwzirlwcg2v3rcz0m")))) + (build-system python-build-system) + (arguments + (list + ;; The test suite hangs, due to a serious bug in Python/Avocado (see: + ;; https://github.com/avocado-framework/avocado/issues/4935). + #:tests? #f + #:phases + #~(modify-phases %standard-phases + (add-after 'unpack 'patch-paths + (lambda* (#:key native-inputs inputs #:allow-other-keys) + ;; These are runtime dependencies (inputs). + (substitute* "avocado/plugins/spawners/podman.py" + (("default='/usr/bin/podman'") + "default='podman'")) + (substitute* "avocado/utils/podman.py" + (("\"/usr/bin/env\", \"python3\"") + (format #f "~s" (search-input-file inputs "bin/python")))) + (substitute* "avocado/utils/memory.py" + (("\"sync\"") + (format #f "~s" (search-input-file inputs "bin/sync"))) + (("/bin/sh") + (search-input-file inputs "bin/sh"))) + ;; Batch process the tests modules with less care; if something + ;; is wrong, the test suite will fail. These are tests + ;; dependencies (native inputs). + (substitute* (find-files "selftests" "\\.py$") + (("#!/usr/bin/env") + (string-append "#!" (search-input-file (or native-inputs inputs) + "bin/env"))) + (("/bin/(false|true|sh|sleep|sudo)" _ name) + (search-input-file (or native-inputs inputs) + (string-append "bin/" name)))))) + (add-after 'unpack 'remove-broken-entrypoints + ;; The avocado-external-runner entry point fails to load, the + ;; 'scripts' top level package not being found (see: + ;; https://github.com/avocado-framework/avocado/issues/5370). + (lambda _ + (substitute* "setup.py" + (("'avocado-external-runner = scripts.external_runner:main'.*") + "")))) + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (setenv "HOME" "/tmp") + (setenv "PYTHONPATH" (getcwd)) + (invoke "./selftests/check.py" "--skip" "static-checks"))))))) + (native-inputs (list bash-minimal coreutils-minimal perl sudo)) + (inputs (list bash-minimal coreutils-minimal)) + (home-page "https://avocado-framework.github.io/") + (synopsis "Tools and libraries to help with automated testing") + (description "Avocado is a set of tools and libraries to help with +automated testing, i.e. a test framework. Native tests are written in Python +and they follow the unittest pattern, but any executable can serve as a +test. The following output formats are supported: +@table @asis +@item xUnit +an XML format that contains test results in a structured form, and are used by +other test automation projects, such as Jenkins. +@item JSON +a widely used data exchange format. The JSON Avocado plugin outputs job +information, similarly to the xunit output plugin. +@item TAP +Provides the basic TAP (Test Anything Protocol) results. Unlike most existing +Avocado machine readable outputs this one is streamlined (per test results). +@end table") + (license license:gpl2))) ;some files are under GPLv2 only + +(define-public python-parameterizedtestcase + (package + (name "python-parameterizedtestcase") + (version "0.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "parameterizedtestcase" version)) + (sha256 + (base32 "0zhjmsd16xacg4vd7zb75kw8q9khn52wvad634v1bvz7swaivk2c")))) + (build-system python-build-system) + (native-inputs (list python-setuptools)) ;for use_2to3 + (home-page + "https://github.com/msabramo/python_unittest_parameterized_test_case") + (synopsis "Parameterized tests for Python's unittest module") + (description "This package provides parameterized tests for Python's +@code{unittest} module taking inspiration from pytest.") + (license license:expat))) + (define-public python-pytest-rerunfailures (package (name "python-pytest-rerunfailures") @@ -1983,13 +2224,13 @@ eliminate flaky failures.") (define-public python-xunitparser (package (name "python-xunitparser") - (version "1.3.3") + (version "1.3.4") (source (origin (method url-fetch) (uri (pypi-uri "xunitparser" version)) (sha256 - (base32 "05amn9yik0mxg89iiprkb6lrmc7rlccgvwajrpyfi6zbp8mjdsgn")))) + (base32 "00lapxi770mg7jkw16zy3a91hbdfz4a9h43ryczdsgd3z4cl6vyf")))) (build-system python-build-system) (arguments `(#:phases @@ -2006,3 +2247,49 @@ eliminate flaky failures.") Python objects. It tries to use the objects available in the standard @code{unittest} module.") (license license:expat))) + +(define-public python-test-utils + (package + (name "python-test-utils") + (version "0.1.0") + (source + (origin + (method url-fetch) + (uri (pypi-uri "test-utils" version)) + (sha256 + (base32 "0cs0gyihnkj8ya4yg3ld3ly73mpxrkn2gq9acamclhqvhxsv7zd6")))) + (build-system python-build-system) + (home-page "https://github.com/Kami/python-test-utils/") + (synopsis "Utilities for functional and integration tests") + (description + "This package provides a collection of utility functions and classes +which make writing and running functional and integration tests easier.") + (license license:asl2.0))) + +(define-public python-sybil + (package + (name "python-sybil") + (version "3.0.1") + (source + (origin + (method url-fetch) + (uri (pypi-uri "sybil" version)) + (sha256 + (base32 "03ak1w93linfqx6c9lwgq5niyy3j9yblv4ip40hmlzmg0hidq0kg")))) + (build-system python-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (replace 'check + (lambda* (#:key tests? #:allow-other-keys) + (when tests? + (invoke "pytest"))))))) + (native-inputs (list python-pytest python-pytest-cov)) + (home-page "https://github.com/simplistix/sybil") + (synopsis "Automated testing for examples in code and documentation") + (description + "This library provides a way to check examples in your code and +documentation by parsing them from their source and evaluating the +parsed examples as part of your normal test run. Integration is +provided for the main Python test runners.") + (license license:expat))) |