diff options
Diffstat (limited to 'gnu/packages/statistics.scm')
| -rw-r--r-- | gnu/packages/statistics.scm | 66 |
1 files changed, 41 insertions, 25 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm index e076cdba44..89bed30916 100644 --- a/gnu/packages/statistics.scm +++ b/gnu/packages/statistics.scm @@ -1624,13 +1624,13 @@ emitter (http://pyyaml.org/wiki/LibYAML) for R.") (define-public r-knitr (package (name "r-knitr") - (version "1.45") + (version "1.46") (source (origin (method url-fetch) (uri (cran-uri "knitr" version)) (sha256 (base32 - "1yw4fnzm8lvh6kpcdlvr1fahz7421h5mmaris58zlgn57fjxwbpf")))) + "0ng8kw79csvcg46lsm3yf147jh6rf91jbj8qlryaihd8jcyc6lcg")))) (build-system r-build-system) (propagated-inputs (list r-evaluate r-highr r-xfun r-yaml)) @@ -1768,13 +1768,13 @@ R packages that praise their users.") (define-public r-testthat (package (name "r-testthat") - (version "3.2.1") + (version "3.2.1.1") (source (origin (method url-fetch) (uri (cran-uri "testthat" version)) (sha256 (base32 - "1ba80zk9jzs91xl82bykhrvvgamfvp1h189rfq099h813dhhx60x")))) + "1xz94i0r62lslyqya8gz6i2r100wi26y5c2822v2i7lkflwwx1fp")))) (build-system r-build-system) (propagated-inputs (list r-brio @@ -2894,14 +2894,14 @@ collation, and NAMESPACE files.") (define-public r-openssl (package (name "r-openssl") - (version "2.1.1") + (version "2.1.2") (source (origin (method url-fetch) (uri (cran-uri "openssl" version)) (sha256 (base32 - "1p2bnr4z4vx3yqq5isqb3z4d9vg2isiz8i0h3vxdb5ramzwjd9zs")))) + "0mm0rlf3m6wkvz5p8prxwjr37rn30lmhddsdi4ffnsmrysfl3rbp")))) (properties `((upstream-name . "openssl") (updater-extra-inputs . ("openssl")))) @@ -3184,13 +3184,13 @@ well as additional utilities such as panel and axis annotation functions.") (define-public r-rcpparmadillo (package (name "r-rcpparmadillo") - (version "0.12.8.1.0") + (version "0.12.8.2.1") (source (origin (method url-fetch) (uri (cran-uri "RcppArmadillo" version)) (sha256 (base32 - "0ax4812dm33c67ckd902qabis3dgqmpkchk4s30bshnfv4fxx1z2")))) + "11w92xjjwfhb3sv3g0m6hdhm27nnx73ahb404zm79a29ihwrj55w")))) (properties `((upstream-name . "RcppArmadillo"))) (build-system r-build-system) (propagated-inputs @@ -3589,14 +3589,14 @@ statements.") (define-public r-segmented (package (name "r-segmented") - (version "2.0-3") + (version "2.0-4") (source (origin (method url-fetch) (uri (cran-uri "segmented" version)) (sha256 (base32 - "1f89v6zbxwl6yhx3qi7wrr3rndnxfwaf49mygw357f7cf3i8ma77")))) + "0a7qfs83kgn7g98kiwlk8zm2q9pzgkvmms9l15sgc5y952yig926")))) (build-system r-build-system) (propagated-inputs (list r-mass r-nlme)) (home-page "https://cran.r-project.org/web/packages/segmented") @@ -3834,13 +3834,13 @@ using the multicore functionality of the parallel package.") "datatables-extensions/Buttons")))) (package (name "r-dt") - (version "0.32") + (version "0.33") (source (origin (method url-fetch) (uri (cran-uri "DT" version)) (sha256 (base32 - "0nvj2bc441b9h13085fa7q281f86lgx4k0d8lr64xgdpbmbvkl21")) + "1f17gdqjk1aj7vwjvv3363k8lnsvc6ssh4s3gy1prnz33kdxlig1")) (modules '((guix build utils) (ice-9 match))) (snippet @@ -4456,13 +4456,13 @@ t-probabilities, quantiles, random deviates and densities.") (define-public r-matrixstats (package (name "r-matrixstats") - (version "1.2.0") + (version "1.3.0") (source (origin (method url-fetch) (uri (cran-uri "matrixStats" version)) (sha256 (base32 - "0ws5lmzqm42vrn5791l21zr05l78x0xi6b89jw0gi0vjb4pc20z4")))) + "0ni4jgw3jfbwakzrcz6jcjr1zsnaq924jz2a9d8kq92vv43ycgj1")))) (properties `((upstream-name . "matrixStats"))) (build-system r-build-system) (arguments @@ -5559,14 +5559,14 @@ forest of trees using random inputs, for classification and regression.") (define-public r-diptest (package (name "r-diptest") - (version "0.77-0") + (version "0.77-1") (source (origin (method url-fetch) (uri (cran-uri "diptest" version)) (sha256 (base32 - "0cnaz1akl86vg5p0g4yl4r66407dxssfki130rrwxpbbbqakbj63")))) + "04r8c6xy5vympxaxmgnjib4pqh97f9k6b43i66qhzkl3yh0awki2")))) (build-system r-build-system) (home-page "https://cran.r-project.org/web/packages/diptest") (synopsis "Hartigan's dip test statistic for unimodality") @@ -6060,14 +6060,14 @@ algorithms.") (define-public r-lme4 (package (name "r-lme4") - (version "1.1-35.2") + (version "1.1-35.3") (source (origin (method url-fetch) (uri (cran-uri "lme4" version)) (sha256 (base32 - "0nvvkvpasna9hy0y3fxd4fy2b2gxzgdga9kmxvli59dlkdy28ipc")))) + "0ij37wly0d28x143xdkjry5jsj4chlbli2fl9zbp8fkcgh95r1xl")))) (build-system r-build-system) (propagated-inputs (list r-boot @@ -6290,18 +6290,18 @@ multivariate case.") (define-public r-tclust (package (name "r-tclust") - (version "1.5-6") + (version "2.0-3") (source (origin (method url-fetch) (uri (cran-uri "tclust" version)) (sha256 (base32 - "1p7y58mklcwq76msh1q8pm2v6v19ja6fy07xg1j07d2zw2wa0phy")))) + "0l0m77a4r7izzw8akx7cz1qcxpvbjgg364yjapazji290741rfs6")))) (build-system r-build-system) ;; These are all suggested packages, not build dependencies. (propagated-inputs - (list r-cluster r-mclust r-mvtnorm r-sn)) + (list r-doparallel r-foreach r-mass r-rcpp r-rcpparmadillo)) (home-page "https://cran.r-project.org/web/packages/tclust") (synopsis "Robust trimmed clustering") (description @@ -6888,19 +6888,35 @@ Java package that provides routines for various statistical distributions.") (((string-append "^\\(ert-deftest " test-name ".*") all) (string-append all "(skip-unless nil)\n")) - ...))))) + ...)))) + (disable-etests ;different test syntax + (syntax-rules () + ((_ file ()) + (syntax-error "test names list must not be empty")) + ((_ file (test-name ...)) + (emacs-batch-edit-file file + '(progn + (mapc (lambda (test) + (goto-char (point-min)) + (search-forward + (format "etest-deftest %s " test)) + (beginning-of-line) + (kill-sexp)) + (list test-name ...)) + (basic-save-buffer))))))) (disable-tests (list "test/ess-test-inf.el" "test/ess-test-r.el") ("ess--derive-connection-path" "ess-eval-line-test" "ess-eval-region-test" "ess-mock-remote-process" - "ess-r-eval-sink-freeze-test" - "ess-r-eval-ns-env-roxy-tracebug-test" "ess-r-load-ESSR-github-fetch-no" "ess-r-load-ESSR-github-fetch-yes" "ess-set-working-directory-test" - "ess-test-r-startup-directory"))))) + "ess-test-r-startup-directory")) + (disable-etests "test/ess-test-r-eval.el" + ("ess-r-eval-ns-env-roxy-tracebug-test" + "ess-r-eval-sink-freeze-test"))))) (replace 'check (lambda* (#:key tests? #:allow-other-keys) (when tests? (invoke "make" "test")))))))) |