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-rw-r--r--gnu/packages/statistics.scm258
1 files changed, 148 insertions, 110 deletions
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 86646fcfe3..18136f1396 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -406,13 +406,13 @@ estimation) corresponding to the book: Wand, M.P. and Jones, M.C. (1995)
(define-public r-lattice
(package
(name "r-lattice")
- (version "0.20-34")
+ (version "0.20-35")
(source (origin
(method url-fetch)
(uri (cran-uri "lattice" version))
(sha256
(base32
- "0615h69czr73k47whhzimf1qxv5qk0cabcrkljwhyrn6m6piq6ja"))))
+ "0pcnmaz3lr62ly0dcy5hnnqxshc4yqd43hrvlz3almgc9l7sna88"))))
(build-system r-build-system)
(home-page "http://lattice.r-forge.r-project.org/")
(synopsis "High-level data visualization system")
@@ -426,14 +426,14 @@ also flexible enough to handle most nonstandard requirements.")
(define-public r-matrix
(package
(name "r-matrix")
- (version "1.2-7.1")
+ (version "1.2-8")
(source
(origin
(method url-fetch)
(uri (cran-uri "Matrix" version))
(sha256
(base32
- "09rd51na9spz0lm1lylkfhw43w7c922b83m4jsggmpg3pbd6dssa"))))
+ "1dyv42d7ranb85y8hvi57hbg5xnvhdzqn56wcq3qmhazqj3s3liw"))))
(properties `((upstream-name . "Matrix")))
(build-system r-build-system)
(propagated-inputs
@@ -471,14 +471,14 @@ nonlinear mixed-effects models.")
(define-public r-mgcv
(package
(name "r-mgcv")
- (version "1.8-16")
+ (version "1.8-17")
(source
(origin
(method url-fetch)
(uri (cran-uri "mgcv" version))
(sha256
(base32
- "0pj31gdwra7nv8spys4pfcbmsik99q1y1d0d2g37ywc3sz5s0rlj"))))
+ "1zj223l4a3j15d3c01wv7dkzn9w6084gxrq5600ck9rvr0lfpwwg"))))
(build-system r-build-system)
(propagated-inputs
`(("r-matrix" ,r-matrix)
@@ -553,14 +553,14 @@ analysis.")
(define-public r-survival
(package
(name "r-survival")
- (version "2.40-1")
+ (version "2.41-3")
(source
(origin
(method url-fetch)
(uri (cran-uri "survival" version))
(sha256
(base32
- "10pf0kq0g66k5rgizrvh29mq3r84acljw2jgrv5yp6z38xw23mci"))))
+ "07cnr0hnki6ybbjll54l4s5lllhk19vni5f8m0mvsfp99ls7qygk"))))
(build-system r-build-system)
(propagated-inputs
`(("r-matrix" ,r-matrix)))
@@ -684,13 +684,13 @@ effects of different types of color-blindness.")
(define-public r-digest
(package
(name "r-digest")
- (version "0.6.10")
+ (version "0.6.12")
(source
(origin
(method url-fetch)
(uri (cran-uri "digest" version))
(sha256
- (base32 "07825781nl85gx3pqskc04ywgs0f874qj9z2nyrwz7h0aqks0l8c"))))
+ (base32 "1awy9phxdvqnadby7rvwy2hkbrj210bqf4xvi27asdq028zlcyd4"))))
(build-system r-build-system)
;; Vignettes require r-knitr, which requires r-digest, so we have to
;; disable them and the tests.
@@ -814,13 +814,13 @@ Munsell colour system.")
(define-public r-rcpp
(package
(name "r-rcpp")
- (version "0.12.8")
+ (version "0.12.10")
(source
(origin
(method url-fetch)
(uri (cran-uri "Rcpp" version))
(sha256
- (base32 "0is1vql1q82g7yakad4skx707ip0fx3rgdwv9a8mi8259gly2qji"))))
+ (base32 "108p485agxwgmnl9p54vsyy94w96lcimlk08v71ddm77gfl13y2f"))))
(build-system r-build-system)
(home-page "http://www.rcpp.org")
(synopsis "Seamless R and C++ Integration")
@@ -943,14 +943,14 @@ solution for sending email, including attachments, from within R.")
(define-public r-stringi
(package
(name "r-stringi")
- (version "1.1.2")
+ (version "1.1.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "stringi" version))
(sha256
(base32
- "13i1p6j8mx31hsw2s4c2phm2llrrdakzixkm6i0axsxprri722z5"))))
+ "1wh20is24lmzhcd9487ckv7r19009fyz4is3ianp3ky69vy8a7k5"))))
(build-system r-build-system)
(inputs `(("icu4c" ,icu4c)))
(native-inputs `(("pkg-config" ,pkg-config)))
@@ -969,13 +969,13 @@ transliteration, concatenation, date-time formatting and parsing, etc.")
(define-public r-stringr
(package
(name "r-stringr")
- (version "1.1.0")
+ (version "1.2.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "stringr" version))
(sha256
- (base32 "0css5j4psl80br75chg6s1s3ipzf89f71bnbys34flp9yghg1cfc"))))
+ (base32 "16hj2rmv8x03lp6cp2jk0k2plibvbggf444kp05przdvd03v7l31"))))
(build-system r-build-system)
(propagated-inputs
`(("r-magrittr" ,r-magrittr)
@@ -1073,14 +1073,14 @@ aesthetic attributes.")
(define-public r-gdtools
(package
(name "r-gdtools")
- (version "0.1.3")
+ (version "0.1.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "gdtools" version))
(sha256
(base32
- "1prh814lw3qkgnf0760cvpic1k68jhlkpcxlksv8chjkvsrnnf09"))))
+ "0l8c4bh6765x9s6rw3mfm1bgicdzdngir1kxh9pxx4sidrdndcip"))))
(build-system r-build-system)
(native-inputs
`(("r-rcpp" ,r-rcpp)
@@ -1162,13 +1162,13 @@ evaluation (NSE) in R.")
(define-public r-dbi
(package
(name "r-dbi")
- (version "0.5-1")
+ (version "0.6-1")
(source (origin
(method url-fetch)
(uri (cran-uri "DBI" version))
(sha256
(base32
- "1idwm9lkmz6ns6h0vvgml18mg0k7vjqiv9p5svrdcmx7r1rirpdi"))))
+ "1fg158k4n6l3rzx9nrwhp4nwkwpbmv1q7z2xz5rw138zws68fkgr"))))
(build-system r-build-system)
(home-page "https://github.com/rstats-db/DBI")
(synopsis "R database interface")
@@ -1525,18 +1525,17 @@ defined in different packages.")
(define-public r-tibble
(package
(name "r-tibble")
- (version "1.2")
+ (version "1.3.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "tibble" version))
(sha256
(base32
- "011i352ylq9b4xfcj7h10h7qsqd9qkc1rzc0pr1gf8qjb788p2pd"))))
+ "1q25i1cv3qms6d3lw7jd3z142w188znkcbyam460gn9si8l8g2bk"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-assertthat" ,r-assertthat)
- ("r-lazyeval" ,r-lazyeval)
+ `(("r-lazyeval" ,r-lazyeval)
("r-rcpp" ,r-rcpp)))
(home-page "https://github.com/hadley/tibble")
(synopsis "Simple data frames")
@@ -1602,14 +1601,14 @@ transformations.")
(define-public r-cluster
(package
(name "r-cluster")
- (version "2.0.5")
+ (version "2.0.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "cluster" version))
(sha256
(base32
- "1bkvqmv8h2c423q9ag2afb6s9j2vcdlxsf559zzbimraphrr2c2b"))))
+ "1z4gbz7chxxi4ly6c0yjlikwgf8aa8dlg05cn5cd6pjr21zvh97l"))))
(build-system r-build-system)
(inputs
`(("gfortran" ,gfortran)))
@@ -1687,13 +1686,13 @@ and density estimation.")
(define-public r-chron
(package
(name "r-chron")
- (version "2.3-48")
+ (version "2.3-50")
(source (origin
(method url-fetch)
(uri (cran-uri "chron" version))
(sha256
(base32
- "1q1d0p2wq19w3mpfqnrg8nmspxqmhv4ap52r393s6y3abl36ccac"))))
+ "1w3sl60gsirniqslb3pa75caiqbzbvc44phpd4czvwkb62xx1vx9"))))
(build-system r-build-system)
(home-page "http://cran.r-project.org/web/packages/chron")
(synopsis "Chronological R objects which can handle dates and times")
@@ -1705,13 +1704,13 @@ times.")
(define-public r-data-table
(package
(name "r-data-table")
- (version "1.10.0")
+ (version "1.10.4")
(source (origin
(method url-fetch)
(uri (cran-uri "data.table" version))
(sha256
(base32
- "1168arn4wjd1jj7kgr4sb8xd52hr8p8iqp85g5jwp3mkz4p76qfg"))))
+ "0ykbjr1x50ajxbri385vi3mnxj7zg1dcgh9y0snp341qmmmdypw6"))))
(build-system r-build-system)
(home-page "https://github.com/Rdatatable/data.table/wiki")
(synopsis "Enhanced version of data.frame R object")
@@ -1867,14 +1866,14 @@ chain.")
(define-public r-ade4
(package
(name "r-ade4")
- (version "1.7-5")
+ (version "1.7-6")
(source
(origin
(method url-fetch)
(uri (cran-uri "ade4" version))
(sha256
(base32
- "0aaqbnydm5fb37nrvqj4bx6hxax7255j426cwh2lh88nyvznbq37"))))
+ "0lnc37d6waajmagy8qvw206pyc4vgrpzl3hk3j9frh6wa0b8x140"))))
(build-system r-build-system)
(home-page "http://pbil.univ-lyon1.fr/ADE-4")
(synopsis "Multivariate data analysis and graphical display")
@@ -1886,14 +1885,14 @@ and environmental data in the framework of Euclidean exploratory methods.")
(define-public r-xml2
(package
(name "r-xml2")
- (version "1.0.0")
+ (version "1.1.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "xml2" version))
(sha256
(base32
- "0f2alsrk3yykznbhnz4pcsg9mb72cv607vbapqx5kqfv39772kgr"))))
+ "05iifrcgzx53w5ciw8bbm4vdwc3giv4xsvazv8chqxkndfvf7wq0"))))
(build-system r-build-system)
(inputs
`(("libxml2" ,libxml2)))
@@ -1910,14 +1909,14 @@ files in R. It is built on top of the libxml2 C library.")
(define-public r-multitaper
(package
(name "r-multitaper")
- (version "1.0-12")
+ (version "1.0-13")
(source
(origin
(method url-fetch)
(uri (cran-uri "multitaper" version))
(sha256
(base32
- "011qpkwpjclfc24y2qqigmdnikqwdnanflfhihigh5b5k7qwgm5j"))))
+ "1ckf9bhvd5k7ypaw2viqh3cyj9jij0ygcp4q9pxwqs508s6yx3a5"))))
(build-system r-build-system)
(native-inputs
`(("gfortran" ,gfortran)))
@@ -1976,14 +1975,14 @@ limited to R.")
(define-public r-backports
(package
(name "r-backports")
- (version "1.0.4")
+ (version "1.0.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "backports" version))
(sha256
(base32
- "0fssh5rnnvpp8wm0ml9gk765idwrgj07xyxpkhpidl9zwydxzif2"))))
+ "1pn1ii8vbkgxcqvx52kzsbwf9gkn9fp33388087zky2hmdzdirn0"))))
(build-system r-build-system)
(home-page "http://cran.r-project.org/web/packages/backports")
(synopsis "Reimplementations of functions introduced since R 3.0.0")
@@ -2021,14 +2020,14 @@ worries about execution time overhead.")
(define-public r-bbmisc
(package
(name "r-bbmisc")
- (version "1.10")
+ (version "1.11")
(source
(origin
(method url-fetch)
(uri (cran-uri "BBmisc" version))
(sha256
(base32
- "0cw2mhw7qhdrx91zzd5iwyh7ch9fy4wxga8j63731q6sxr1airjl"))))
+ "1lh1n4bvxzivb5rbz69mvd8xdgr3gr2bnqd68a39sd1530l8r90y"))))
(properties `((upstream-name . "BBmisc")))
(build-system r-build-system)
(propagated-inputs
@@ -2112,23 +2111,76 @@ code for report generation. The template syntax is similar to PHP, Ruby's erb
module, Java Server Pages, and Python's psp module.")
(license license:gpl2+)))
+(define-public r-desc
+ (package
+ (name "r-desc")
+ (version "1.1.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "desc" version))
+ (sha256
+ (base32
+ "0mc1jmiwqyj7s6gzxz6fyamzjpmdn3rpfpllby2fq11ml30c6jpr"))))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-assertthat" ,r-assertthat)
+ ("r-crayon" ,r-crayon)
+ ("r-r6" ,r-r6)
+ ("r-rprojroot" ,r-rprojroot)))
+ (home-page "https://github.com/r-pkgs/desc")
+ (synopsis "Manipulate DESCRIPTION Files")
+ (description
+ "This package provides tools to read, write, create, and manipulate
+DESCRIPTION files. It is intended for packages that create or manipulate
+other packages.")
+ (license license:expat)))
+
+(define-public r-commonmark
+ (package
+ (name "r-commonmark")
+ (version "1.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "commonmark" version))
+ (sha256
+ (base32
+ "12q5mncxvkwdxc35is6y5idx8a1h99hyz5x6ri0arni6k25krchk"))))
+ (build-system r-build-system)
+ ;;(inputs `(("zlib" ,zlib)))
+ (home-page "http://cran.r-project.org/web/packages/commonmark")
+ (synopsis "CommonMark and Github Markdown Rendering in R")
+ (description
+ "The CommonMark specification defines a rationalized version of markdown
+syntax. This package uses the 'cmark' reference implementation for converting
+markdown text into various formats including HTML, LaTeX and groff man. In
+addition, it exposes the markdown parse tree in XML format. The latest
+version of this package also adds support for Github extensions including
+tables, autolinks and strikethrough text.")
+ (license license:bsd-2)))
+
(define-public r-roxygen2
(package
(name "r-roxygen2")
- (version "5.0.1")
+ (version "6.0.1")
(source (origin
(method url-fetch)
(uri (cran-uri "roxygen2" version))
(sha256
(base32
- "19gblyrrn29msbpawcb1hn5m1rshiqwxy0lby0vf92rm13fmsxcz"))))
+ "0xpzziminf225kjwhyl51kgkzhplyzhk5farhf5s822krl2xqbfj"))))
(build-system r-build-system)
(propagated-inputs
`(("r-brew" ,r-brew)
+ ("r-commonmark" ,r-commonmark)
+ ("r-desc" ,r-desc)
("r-digest" ,r-digest)
+ ("r-r6" ,r-r6)
("r-rcpp" ,r-rcpp)
("r-stringi" ,r-stringi)
- ("r-stringr" ,r-stringr)))
+ ("r-stringr" ,r-stringr)
+ ("r-xml2" ,r-xml2)))
(home-page "https://github.com/klutometis/roxygen")
(synopsis "In-source documentation system for R")
(description
@@ -2308,17 +2360,16 @@ time-of-day values, based on the @code{difftime} class.")
(define-public r-readr
(package
(name "r-readr")
- (version "1.0.0")
+ (version "1.1.0")
(source (origin
(method url-fetch)
(uri (cran-uri "readr" version))
(sha256
(base32
- "0xji0dbal6xcxnsmjj678fw29n7wrj45wrd5ng99yhqqijcm9f6g"))))
+ "1g7g3gdmvq7nj8asw6fi13k38c420sy9696nqgkrhlvv5h13yqs7"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-curl" ,r-curl)
- ("r-rcpp" ,r-rcpp)
+ `(("r-rcpp" ,r-rcpp)
("r-hms" ,r-hms)
("r-tibble" ,r-tibble)
("r-r6" ,r-r6)
@@ -2392,32 +2443,17 @@ well as additional utilities such as panel and axis annotation functions.")
(define-public r-rcpparmadillo
(package
(name "r-rcpparmadillo")
- (version "0.7.600.1.0")
+ (version "0.7.700.0.0")
(source (origin
(method url-fetch)
(uri (cran-uri "RcppArmadillo" version))
(sha256
(base32
- "0k1wniip184j0ckcg9kcjy2q4mcfj5jpd1nkk4l0ab75ad8znywv"))
- (modules '((guix build utils)))
- ;; Remove bundled armadillo sources
- (snippet
- '(begin
- (delete-file-recursively "inst/include/armadillo_bits")
- (delete-file "inst/include/armadillo")))))
+ "03cvl2xgmvh4sylw7ff7s020y7k2wzyj34l0zngm09qs44pa9q0m"))))
(properties `((upstream-name . "RcppArmadillo")))
(build-system r-build-system)
- (arguments
- `(#:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'link-against-armadillo
- (lambda _
- (substitute* "src/Makevars"
- (("PKG_LIBS=" prefix)
- (string-append prefix "-larmadillo"))))))))
(propagated-inputs
- `(("r-rcpp" ,r-rcpp)
- ("armadillo" ,armadillo-for-rcpparmadillo)))
+ `(("r-rcpp" ,r-rcpp)))
(home-page "https://github.com/RcppCore/RcppArmadillo")
(synopsis "Rcpp integration for the Armadillo linear algebra library")
(description
@@ -2476,14 +2512,14 @@ encoder/decoder, round-off-error-free sum and cumsum, etc.")
(define-public r-rprojroot
(package
(name "r-rprojroot")
- (version "1.1")
+ (version "1.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "rprojroot" version))
(sha256
(base32
- "04ywfpar4d2hyi4rh4fbixrbzd665gpa2jhx67g8857cr70pp0nh"))))
+ "1fgyxv1zv04sllcclzz089xl6hpdzac7xk61l0l4acb7rqsx5d18"))))
(build-system r-build-system)
(propagated-inputs
`(("r-backports" ,r-backports)))
@@ -2499,14 +2535,14 @@ certain criterion, e.g., it contains a certain regular file.")
(define-public r-rmarkdown
(package
(name "r-rmarkdown")
- (version "1.3")
+ (version "1.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "rmarkdown" version))
(sha256
(base32
- "1vvxyf3zhyxx6k697lia299456hryp8nh3zr0fc27f3107a8mcjf"))))
+ "1dvs9cq88g61wfimifagq6y98yxavxzjan39jvpdsg98mafckq9g"))))
(properties `((upstream-name . "rmarkdown")))
(build-system r-build-system)
(propagated-inputs
@@ -2592,13 +2628,13 @@ error stream.")
(define-public r-rsqlite
(package
(name "r-rsqlite")
- (version "1.1-1")
+ (version "1.1-2")
(source (origin
(method url-fetch)
(uri (cran-uri "RSQLite" version))
(sha256
(base32
- "11vnzds5gidgakdmsbdn0bvnsz064ym1savwb7l6gc1bjn7xa2k4"))))
+ "0mg9yhdvny3vjn72agai5ghqxd3vk8cd4x1lsc0gzc2b2dm2w0p4"))))
(properties `((upstream-name . "RSQLite")))
(build-system r-build-system)
(propagated-inputs
@@ -2649,13 +2685,13 @@ ldap, and also supports cookies, redirects, authentication, etc.")
(define-public r-xml
(package
(name "r-xml")
- (version "3.98-1.5")
+ (version "3.98-1.6")
(source (origin
(method url-fetch)
(uri (cran-uri "XML" version))
(sha256
(base32
- "0dcdj7ryn8lm7wmv4hqhh9jxa5k97l6ad8xyvb932yfkwj1g1byy"))))
+ "1amxx7fpik162nimrr7m5lvv6rhx9cwdyg44fxp1i5wm3y4skwnz"))))
(properties
`((upstream-name . "XML")))
(build-system r-build-system)
@@ -2808,13 +2844,13 @@ worker processes and collect and return the results on the master.")
(define-public r-sparsem
(package
(name "r-sparsem")
- (version "1.74")
+ (version "1.76")
(source (origin
(method url-fetch)
(uri (cran-uri "SparseM" version))
(sha256
(base32
- "1fpfhld887y5lyb8jydprmv5krqm1fk6n53z942b4g4z1v4g04j7"))))
+ "16xnl9cacim35aawq6bmd2y6rrhnh1kg6dwsy3k5yslkfr1y9j62"))))
(properties
`((upstream-name . "SparseM")))
(inputs
@@ -3139,14 +3175,14 @@ Stochastic Neighbor Embedding using a Barnes-Hut implementation.")
(define-public r-e1071
(package
(name "r-e1071")
- (version "1.6-7")
+ (version "1.6-8")
(source
(origin
(method url-fetch)
(uri (cran-uri "e1071" version))
(sha256
(base32
- "1069qwj9gsjq6par2cgfah8nn5x2w38830761x1f7mqpmk0gnj3h"))))
+ "08n6i26nfckjpxjkzi8phhanc3ahsrirkv5rz38y2jcv7ds031pn"))))
(build-system r-build-system)
(propagated-inputs
`(("r-class" ,r-class)))
@@ -3426,13 +3462,13 @@ vignettes.")
(define-public r-mvtnorm
(package
(name "r-mvtnorm")
- (version "1.0-5")
+ (version "1.0-6")
(source (origin
(method url-fetch)
(uri (cran-uri "mvtnorm" version))
(sha256
(base32
- "1pc1mi2h063gh4a40009xk5j6pf5bm4274i5kycln38dixsry3yh"))))
+ "0i74s9dl4jf1gln6agra8h38qn9ifd5v0gi13caj1da5nrbmn0aa"))))
(build-system r-build-system)
(inputs
`(("gfortran" ,gfortran)))
@@ -3445,13 +3481,13 @@ t-probabilities, quantiles, random deviates and densities.")
(define-public r-matrixstats
(package
(name "r-matrixstats")
- (version "0.51.0")
+ (version "0.52.1")
(source (origin
(method url-fetch)
(uri (cran-uri "matrixStats" version))
(sha256
(base32
- "0bsalx605kgb9nl7mfnq1qinkyd9s97p8plymsyfja1gmcnjrcpj"))))
+ "0ihxnbbc1czfbccm8mrh7hjwdik3y90964xhbjday6fci0xjcsi5"))))
(properties `((upstream-name . "matrixStats")))
(build-system r-build-system)
(native-inputs
@@ -3469,17 +3505,18 @@ memory usage.")
(define-public r-viridis
(package
(name "r-viridis")
- (version "0.3.4")
+ (version "0.4.0")
(source (origin
(method url-fetch)
(uri (cran-uri "viridis" version))
(sha256
(base32
- "1a9hqn2pccpc51vh8ghw698ni6xzdnp8v0n8kgjh51nlz5hhc87j"))))
+ "03mha2935k1mw7mjjkq7mrx185hl0m3vq3967iiwbknpivbdxllk"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
- ("r-gridextra" ,r-gridextra)))
+ ("r-gridextra" ,r-gridextra)
+ ("r-viridislite" ,r-viridislite)))
(home-page "https://github.com/sjmgarnier/viridis")
(synopsis "Matplotlib default color map")
(description
@@ -3495,14 +3532,14 @@ most common form of color blindness.")
(define-public r-viridislite
(package
(name "r-viridislite")
- (version "0.1.3")
+ (version "0.2.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "viridisLite" version))
(sha256
(base32
- "1b0fhj8i1m9jsz91gzag60k7vy7kk5xkdg31rc3h3spq96l66psp"))))
+ "1546h44ng4dxs130jkh6lkh990hmp90m1w45sq5p47n546gr0k9d"))))
(properties `((upstream-name . "viridisLite")))
(build-system r-build-system)
(home-page "https://github.com/sjmgarnier/viridisLite")
@@ -3520,21 +3557,22 @@ the 'lite' version of the more complete @code{viridis} package.")
(define-public r-tidyr
(package
(name "r-tidyr")
- (version "0.6.0")
+ (version "0.6.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "tidyr" version))
(sha256
(base32
- "1bpwbphgl43ym433b0nrshwhr7pprmj1wkpkamdzix1zvf9dcbc2"))))
+ "11hs3gqpbaw3w281as4m7j9n594ix5axfpwbyjsd0l62pwnzj217"))))
(build-system r-build-system)
(propagated-inputs
`(("r-dplyr" ,r-dplyr)
("r-lazyeval" ,r-lazyeval)
("r-magrittr" ,r-magrittr)
("r-rcpp" ,r-rcpp)
- ("r-stringi" ,r-stringi)))
+ ("r-stringi" ,r-stringi)
+ ("r-tibble" ,r-tibble)))
(home-page "https://github.com/hadley/tidyr")
(synopsis "Tidy data with `spread()` and `gather()` functions")
(description
@@ -4153,13 +4191,13 @@ with alternating row colors) in LaTeX and HTML formats easily from
(define-public r-vipor
(package
(name "r-vipor")
- (version "0.4.4")
+ (version "0.4.5")
(source (origin
(method url-fetch)
(uri (cran-uri "vipor" version))
(sha256
(base32
- "0p1z9a3fazl78pj8a1i2n62v8hrs8cinq82j9wpawhmfkn3dggss"))))
+ "112gc0d7f8iavgf56pnzfxb7hy75yhd0zlyjzshdcfbnqcd2a6bx"))))
(build-system r-build-system)
(home-page "http://cran.r-project.org/web/packages/vipor")
(synopsis "Plot categorical data using noise and density estimates")
@@ -4191,14 +4229,14 @@ closely-packed, non-overlapping points.")
(define-public r-sourcetools
(package
(name "r-sourcetools")
- (version "0.1.5")
+ (version "0.1.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "sourcetools" version))
(sha256
(base32
- "0jx6kslygfqaic3cmjwag3dy98q1a2dw20cz7z8agsknmmbk6dy2"))))
+ "0l8c6fql82cb246qh7hfgxb4s35qn0qfgy6dzvkx0zkz1cpqvx69"))))
(build-system r-build-system)
(home-page "http://cran.r-project.org/web/packages/sourcetools")
(synopsis "Tools for reading, tokenizing and parsing R code")
@@ -4234,13 +4272,13 @@ data at that region, and avoids over-plotting.")
(define-public r-ggthemes
(package
(name "r-ggthemes")
- (version "3.3.0")
+ (version "3.4.0")
(source (origin
(method url-fetch)
(uri (cran-uri "ggthemes" version))
(sha256
(base32
- "1qdxg2siwsiq32fmgcxn4vihgxad9v8q0aqigl7a94c26bwxs7y2"))))
+ "1jj8lp7jbk3489kpgbw4b5phpn01gkfmksc21c6sn3x6wmzyn6hs"))))
(build-system r-build-system)
(propagated-inputs
`(("r-assertthat" ,r-assertthat)
@@ -4259,13 +4297,13 @@ Wall Street Journal, among others. This package also provides
(define-public r-statmod
(package
(name "r-statmod")
- (version "1.4.27")
+ (version "1.4.29")
(source (origin
(method url-fetch)
(uri (cran-uri "statmod" version))
(sha256
(base32
- "14yilq9d3z20hig4rs8bjqyydw3dfx90mhmzvw9w8p16h0s595sn"))))
+ "1fgzkwriba39d7946lq892f0si2fjdy37pvxki6ix8xyj8qgnci4"))))
(build-system r-build-system)
(home-page "http://cran.r-project.org/web/packages/statmod")
(native-inputs
@@ -4378,19 +4416,19 @@ letters, as is often required for scientific publications.")
(define-public r-mixtools
(package
(name "r-mixtools")
- (version "1.0.4")
+ (version "1.1.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "mixtools" version))
(sha256
(base32
- "133rr17ywmlhsc6457hs8qxi8ng443ql9ashxpwc8875gjhv1x32"))))
+ "13wdm0xs5bakhpa8ypg6lvhjaqkxyabwz4glxdwn0jwdvkcdhgsl"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-boot" ,r-boot)
- ("r-mass" ,r-mass)
- ("r-segmented" ,r-segmented)))
+ `(("r-mass" ,r-mass)
+ ("r-segmented" ,r-segmented)
+ ("r-survival" ,r-survival)))
(home-page "http://cran.r-project.org/web/packages/mixtools")
(synopsis "Tools for analyzing finite mixture models")
(description
@@ -4536,14 +4574,14 @@ models, generalized linear models and model-based clustering.")
(define-public r-mclust
(package
(name "r-mclust")
- (version "5.2.2")
+ (version "5.2.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "mclust" version))
(sha256
(base32
- "19cbg7p5h2b6h9mvcx9rjppyd3awma18ymaljakbnclpvhwbqpwd"))))
+ "0045msdw1xndfmlylbnm1ss716iiqzqwj454a97gmcq5kph86qzz"))))
(build-system r-build-system)
(native-inputs
`(("gfortran" ,gfortran)))
@@ -4772,14 +4810,14 @@ based on an interface to Fortran implementations by M. J. D. Powell.")
(define-public r-rcppeigen
(package
(name "r-rcppeigen")
- (version "0.3.2.9.0")
+ (version "0.3.2.9.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "RcppEigen" version))
(sha256
(base32
- "0fy9kr03160f1ywzff3p380s8a59jz7d2d0rggb14g2y0slzpbr5"))))
+ "1ih940yjbc530cmpl6kx1jic7pz2ps1w5vrvy32qizh6m5s3lk7x"))))
(properties `((upstream-name . "RcppEigen")))
(build-system r-build-system)
(propagated-inputs
@@ -4923,14 +4961,14 @@ C++ library for numerical linear algebra and RcppEigen glue.")
(define-public r-pbkrtest
(package
(name "r-pbkrtest")
- (version "0.4-6")
+ (version "0.4-7")
(source
(origin
(method url-fetch)
(uri (cran-uri "pbkrtest" version))
(sha256
(base32
- "00cw18q7wvddzjrbxz917wkix6r7672vi2wmsp4gwgzady8vha4x"))))
+ "1si3bhi59xc51a0pgjjglccq3h4aljyhw2k1b8574s145fnh7fsw"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lme4" ,r-lme4)
@@ -5114,14 +5152,14 @@ diagnostic tools (@code{ctlcurves} and @code{DiscrFact}).")
(define-public r-ranger
(package
(name "r-ranger")
- (version "0.6.0")
+ (version "0.7.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "ranger" version))
(sha256
(base32
- "1fwqwbi0dnla16x6zj14rf95qr5gmilfmlrwnv7s960h4yiw4n97"))))
+ "0g1rnpk4c06lmy0r5n0j7i2xna190kqalmxp42d9gnk3drnb1x43"))))
(build-system r-build-system)
(propagated-inputs
`(("r-rcpp" ,r-rcpp)))
generated by cgit v1.2.3 (git 2.45.2) at 2024-07-10 12:53:59 +0000