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Diffstat (limited to 'gnu/packages')
| -rw-r--r-- | gnu/packages/bioinformatics.scm | 27 |
1 files changed, 27 insertions, 0 deletions
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 0456cc61c7..2cbda0cd73 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -5220,6 +5220,33 @@ databases. Packages produced are intended to be used with AnnotationDbi.") the graph algorithms contained in the Boost library.") (license license:artistic2.0))) +(define-public r-gseabase + (package + (name "r-gseabase") + (version "1.34.1") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "GSEABase" version)) + (sha256 + (base32 + "1mvgja8malrnbzfakzjl5mmi7g080kj8zgxwc5964hcmn33i937j")))) + (properties `((upstream-name . "GSEABase"))) + (build-system r-build-system) + (propagated-inputs + `(("r-annotate" ,r-annotate) + ("r-annotationdbi" ,r-annotationdbi) + ("r-biobase" ,r-biobase) + ("r-biocgenerics" ,r-biocgenerics) + ("r-graph" ,r-graph) + ("r-xml" ,r-xml))) + (home-page "http://bioconductor.org/packages/GSEABase") + (synopsis "Gene set enrichment data structures and methods") + (description + "This package provides classes and methods to support @dfn{Gene Set +Enrichment Analysis} (GSEA).") + (license license:artistic2.0))) + (define-public vsearch (package (name "vsearch") |