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-rw-r--r--gnu/bootloader/grub.scm26
-rw-r--r--gnu/installer.scm2
-rw-r--r--gnu/installer/newt/keymap.scm21
-rw-r--r--gnu/local.mk16
-rw-r--r--gnu/packages/admin.scm74
-rw-r--r--gnu/packages/algebra.scm23
-rw-r--r--gnu/packages/aspell.scm4
-rw-r--r--gnu/packages/assembly.scm35
-rw-r--r--gnu/packages/astronomy.scm97
-rw-r--r--gnu/packages/audio.scm59
-rw-r--r--gnu/packages/autotools.scm49
-rw-r--r--gnu/packages/bioinformatics.scm520
-rw-r--r--gnu/packages/bootloaders.scm125
-rw-r--r--gnu/packages/busybox.scm6
-rw-r--r--gnu/packages/check.scm51
-rw-r--r--gnu/packages/chromium.scm8
-rw-r--r--gnu/packages/compression.scm8
-rw-r--r--gnu/packages/cpp.scm22
-rw-r--r--gnu/packages/cran.scm693
-rw-r--r--gnu/packages/crates-graphics.scm4
-rw-r--r--gnu/packages/crates-io.scm1188
-rw-r--r--gnu/packages/cups.scm72
-rw-r--r--gnu/packages/databases.scm125
-rw-r--r--gnu/packages/diffoscope.scm4
-rw-r--r--gnu/packages/disk.scm8
-rw-r--r--gnu/packages/dns.scm12
-rw-r--r--gnu/packages/docbook.scm163
-rw-r--r--gnu/packages/education.scm18
-rw-r--r--gnu/packages/efi.scm41
-rw-r--r--gnu/packages/elf.scm4
-rw-r--r--gnu/packages/elixir.scm5
-rw-r--r--gnu/packages/emacs-xyz.scm361
-rw-r--r--gnu/packages/engineering.scm16
-rw-r--r--gnu/packages/enlightenment.scm13
-rw-r--r--gnu/packages/erlang.scm15
-rw-r--r--gnu/packages/file-systems.scm37
-rw-r--r--gnu/packages/finance.scm50
-rw-r--r--gnu/packages/games.scm215
-rw-r--r--gnu/packages/genimage.scm3
-rw-r--r--gnu/packages/gl.scm5
-rw-r--r--gnu/packages/gnome-xyz.scm51
-rw-r--r--gnu/packages/gnome.scm34
-rw-r--r--gnu/packages/gnupg.scm79
-rw-r--r--gnu/packages/gnuzilla.scm8
-rw-r--r--gnu/packages/gps.scm6
-rw-r--r--gnu/packages/graphics.scm39
-rw-r--r--gnu/packages/guile-xyz.scm79
-rw-r--r--gnu/packages/guile.scm27
-rw-r--r--gnu/packages/idris.scm12
-rw-r--r--gnu/packages/image-viewers.scm4
-rw-r--r--gnu/packages/image.scm4
-rw-r--r--gnu/packages/inkscape.scm4
-rw-r--r--gnu/packages/java.scm5
-rw-r--r--gnu/packages/kde-frameworks.scm7
-rw-r--r--gnu/packages/kde.scm64
-rw-r--r--gnu/packages/libreoffice.scm6
-rw-r--r--gnu/packages/libunwind.scm4
-rw-r--r--gnu/packages/libusb.scm4
-rw-r--r--gnu/packages/license.scm6
-rw-r--r--gnu/packages/linux.scm85
-rw-r--r--gnu/packages/lisp-xyz.scm852
-rw-r--r--gnu/packages/lisp.scm47
-rw-r--r--gnu/packages/lua.scm30
-rw-r--r--gnu/packages/mail.scm7
-rw-r--r--gnu/packages/maths.scm30
-rw-r--r--gnu/packages/matrix.scm6
-rw-r--r--gnu/packages/messaging.scm16
-rw-r--r--gnu/packages/mp3.scm8
-rw-r--r--gnu/packages/mpd.scm76
-rw-r--r--gnu/packages/music.scm12
-rw-r--r--gnu/packages/musl.scm4
-rw-r--r--gnu/packages/nano.scm6
-rw-r--r--gnu/packages/networking.scm33
-rw-r--r--gnu/packages/node.scm4
-rw-r--r--gnu/packages/ocaml.scm135
-rw-r--r--gnu/packages/onc-rpc.scm4
-rw-r--r--gnu/packages/package-management.scm51
-rw-r--r--gnu/packages/password-utils.scm6
-rw-r--r--gnu/packages/patches/freebayes-devendor-deps.patch152
-rw-r--r--gnu/packages/patches/guile-2.2-skip-so-test.patch23
-rw-r--r--gnu/packages/patches/idris-disable-test.patch19
-rw-r--r--gnu/packages/patches/ipxe-reproducible-geniso.patch77
-rw-r--r--gnu/packages/patches/mutt-CVE-2021-3181.patch45
-rw-r--r--gnu/packages/patches/podofo-cmake-3.12.patch19
-rw-r--r--gnu/packages/patches/r-httpuv-1.5.5-unvendor-libuv.patch (renamed from gnu/packages/patches/r-httpuv-1.5.4-unvendor-libuv.patch)0
-rw-r--r--gnu/packages/patches/tipp10-disable-downloader.patch165
-rw-r--r--gnu/packages/patches/tipp10-qt5.patch69
-rw-r--r--gnu/packages/patches/vcflib-use-shared-libraries.patch135
-rw-r--r--gnu/packages/pdf.scm11
-rw-r--r--gnu/packages/perl.scm33
-rw-r--r--gnu/packages/printers.scm72
-rw-r--r--gnu/packages/python-xyz.scm8
-rw-r--r--gnu/packages/qt.scm170
-rw-r--r--gnu/packages/radio.scm40
-rw-r--r--gnu/packages/rdf.scm10
-rw-r--r--gnu/packages/ruby.scm12
-rw-r--r--gnu/packages/rust-apps.scm155
-rw-r--r--gnu/packages/samba.scm87
-rw-r--r--gnu/packages/scribus.scm26
-rw-r--r--gnu/packages/search.scm6
-rw-r--r--gnu/packages/shells.scm4
-rw-r--r--gnu/packages/skarnet.scm38
-rw-r--r--gnu/packages/statistics.scm155
-rw-r--r--gnu/packages/syndication.scm5
-rw-r--r--gnu/packages/terminals.scm4
-rw-r--r--gnu/packages/tex.scm181
-rw-r--r--gnu/packages/text-editors.scm6
-rw-r--r--gnu/packages/version-control.scm17
-rw-r--r--gnu/packages/video.scm25
-rw-r--r--gnu/packages/virtualization.scm37
-rw-r--r--gnu/packages/web.scm10
-rw-r--r--gnu/packages/wm.scm6
-rw-r--r--gnu/packages/xdisorg.scm5
-rw-r--r--gnu/packages/xfce.scm138
-rw-r--r--gnu/packages/xml.scm176
-rw-r--r--gnu/packages/xorg.scm9
-rw-r--r--gnu/services/base.scm32
-rw-r--r--gnu/services/cups.scm12
-rw-r--r--gnu/services/networking.scm65
-rw-r--r--gnu/services/shepherd.scm14
-rw-r--r--gnu/services/syncthing.scm89
-rw-r--r--gnu/services/virtualization.scm8
-rw-r--r--gnu/services/web.scm27
-rw-r--r--gnu/system.scm6
-rw-r--r--gnu/system/examples/bare-hurd.tmpl2
-rw-r--r--gnu/system/image.scm18
-rw-r--r--gnu/system/images/novena.scm2
-rw-r--r--gnu/system/images/pine64.scm2
-rw-r--r--gnu/system/images/pinebook-pro.scm6
-rw-r--r--gnu/system/install.scm6
-rw-r--r--gnu/system/linux-container.scm7
-rw-r--r--gnu/system/mapped-devices.scm5
-rw-r--r--gnu/system/shadow.scm46
-rw-r--r--gnu/tests/install.scm4
134 files changed, 6525 insertions, 2029 deletions
diff --git a/gnu/bootloader/grub.scm b/gnu/bootloader/grub.scm
index 29c81ae641..13ee695909 100644
--- a/gnu/bootloader/grub.scm
+++ b/gnu/bootloader/grub.scm
@@ -168,15 +168,14 @@ STORE-DEVICE designates the device holding the store, and STORE-MOUNT-POINT is
its mount point; these are used to determine where the background image and
fonts must be searched for. STORE-DIRECTORY-PREFIX is a directory prefix to
prepend to any store file name."
- (define (setup-gfxterm config font-file)
+ (define (setup-gfxterm config)
(if (memq 'gfxterm (bootloader-configuration-terminal-outputs config))
#~(format #f "
-if loadfont ~a; then
+if loadfont unicode; then
set gfxmode=~a
insmod all_video
insmod gfxterm
fi~%"
- #+font-file
#$(string-join
(grub-theme-gfxmode (bootloader-theme config))
";"))
@@ -188,13 +187,6 @@ fi~%"
(string-append (symbol->string (assoc-ref colors 'fg)) "/"
(symbol->string (assoc-ref colors 'bg)))))
- (define font-file
- (let* ((bootloader (bootloader-configuration-bootloader config))
- (grub (bootloader-package bootloader)))
- (normalize-file (file-append grub "/share/grub/unicode.pf2")
- store-mount-point
- store-directory-prefix)))
-
(define image
(normalize-file (grub-background-image config)
store-mount-point
@@ -216,8 +208,8 @@ else
set menu_color_normal=cyan/blue
set menu_color_highlight=white/blue
fi~%"
- #$(grub-root-search store-device font-file)
- #$(setup-gfxterm config font-file)
+ #$(grub-root-search store-device image)
+ #$(setup-gfxterm config)
#$(grub-setup-io config)
#$image
@@ -545,9 +537,13 @@ fi~%"))))
(invoke/quiet grub "--no-floppy" "--target=i386-pc"
"--boot-directory" install-dir
device))
- ;; When creating a disk-image, only install GRUB modules.
- (copy-recursively (string-append bootloader "/lib/")
- install-dir)))))
+ ;; When creating a disk-image, only install a font and GRUB modules.
+ (let* ((fonts (string-append install-dir "/grub/fonts")))
+ (mkdir-p fonts)
+ (copy-file (string-append bootloader "/share/grub/unicode.pf2")
+ (string-append fonts "/unicode.pf2"))
+ (copy-recursively (string-append bootloader "/lib/")
+ install-dir))))))
(define install-grub-disk-image
#~(lambda (bootloader root-index image)
diff --git a/gnu/installer.scm b/gnu/installer.scm
index 7863edbb67..d2be4b34f9 100644
--- a/gnu/installer.scm
+++ b/gnu/installer.scm
@@ -187,7 +187,7 @@ selected keymap."
(lambda (models layouts)
((installer-keymap-page current-installer)
layouts '#$context)))))
- (#$apply-keymap result)
+ (and result (#$apply-keymap result))
result)))
(define (installer-steps)
diff --git a/gnu/installer/newt/keymap.scm b/gnu/installer/newt/keymap.scm
index 1b3af2f158..92f7f46f34 100644
--- a/gnu/installer/newt/keymap.scm
+++ b/gnu/installer/newt/keymap.scm
@@ -56,7 +56,7 @@ different layout at any time from the parameters menu.")))
(else (G_ "Exit")))
#:button-callback-procedure
(case context
- ((param) (const #t))
+ ((param) (const #f))
(else
(lambda _
(raise
@@ -183,7 +183,9 @@ options."
(compute
(lambda (result _)
(let* ((layout (result-step result 'layout))
- (variants (x11-keymap-layout-variants layout)))
+ (variants (if layout
+ (x11-keymap-layout-variants layout)
+ '())))
;; Return #f if the layout does not have any variant.
(and (not (null? variants))
(run-variant-page
@@ -196,16 +198,19 @@ options."
(gettext (x11-keymap-layout-description layout)
"xkeyboard-config")))))))))))
- (define (format-result result)
- (let ((layout (x11-keymap-layout-name
- (result-step result 'layout)))
- (variant (and=> (result-step result 'variant)
+ (define (format-result layout variant)
+ (let ((layout (x11-keymap-layout-name layout))
+ (variant (and=> variant
(lambda (variant)
(gettext (x11-keymap-variant-name variant)
"xkeyboard-config")))))
(toggleable-latin-layout layout variant)))
- (format-result
- (run-installer-steps #:steps keymap-steps)))
+
+ (let* ((result (run-installer-steps #:steps keymap-steps))
+ (layout (result-step result 'layout))
+ (variant (result-step result 'variant)))
+ (and layout
+ (format-result layout variant))))
(define (keyboard-layout->configuration keymap)
"Return the operating system configuration snippet to install KEYMAP."
diff --git a/gnu/local.mk b/gnu/local.mk
index ba95aeca64..f71d75135d 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -10,14 +10,14 @@
# Copyright © 2016, 2017, 2018, 2019, 2020 Ricardo Wurmus <rekado@elephly.net>
# Copyright © 2016 Ben Woodcroft <donttrustben@gmail.com>
# Copyright © 2016, 2017, 2018, 2019 Alex Vong <alexvong1995@gmail.com>
-# Copyright © 2016, 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
+# Copyright © 2016, 2017, 2018, 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
# Copyright © 2016, 2017, 2018, 2019, 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
# Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
# Copyright © 2017, 2018 Clément Lassieur <clement@lassieur.org>
# Copyright © 2017, 2020 Mathieu Othacehe <m.othacehe@gmail.com>
# Copyright © 2017, 2018, 2019 Gábor Boskovits <boskovits@gmail.com>
# Copyright © 2018 Amirouche Boubekki <amirouche@hypermove.net>
-# Copyright © 2018, 2019, 2020 Oleg Pykhalov <go.wigust@gmail.com>
+# Copyright © 2018, 2019, 2020, 2021 Oleg Pykhalov <go.wigust@gmail.com>
# Copyright © 2018 Stefan Stefanović <stefanx2ovic@gmail.com>
# Copyright © 2018, 2020 Maxim Cournoyer <maxim.cournoyer@gmail.com>
# Copyright © 2019, 2020 Guillaume Le Vaillant <glv@posteo.net>
@@ -630,6 +630,7 @@ GNU_SYSTEM_MODULES = \
%D%/services/sddm.scm \
%D%/services/spice.scm \
%D%/services/ssh.scm \
+ %D%/services/syncthing.scm \
%D%/services/sysctl.scm \
%D%/services/telephony.scm \
%D%/services/version-control.scm \
@@ -997,6 +998,7 @@ dist_patch_DATA = \
%D%/packages/patches/fpc-reproducibility.patch \
%D%/packages/patches/fplll-std-fenv.patch \
%D%/packages/patches/freedink-engine-fix-sdl-hints.patch \
+ %D%/packages/patches/freebayes-devendor-deps.patch \
%D%/packages/patches/freeimage-unbundle.patch \
%D%/packages/patches/fuse-overlapping-headers.patch \
%D%/packages/patches/gajim-honour-GAJIM_PLUGIN_PATH.patch \
@@ -1128,6 +1130,7 @@ dist_patch_DATA = \
%D%/packages/patches/gspell-dash-test.patch \
%D%/packages/patches/guile-1.8-cpp-4.5.patch \
%D%/packages/patches/guile-2.2-skip-oom-test.patch \
+ %D%/packages/patches/guile-2.2-skip-so-test.patch \
%D%/packages/patches/guile-default-utf8.patch \
%D%/packages/patches/guile-2.2-default-utf8.patch \
%D%/packages/patches/guile-relocatable.patch \
@@ -1178,12 +1181,14 @@ dist_patch_DATA = \
%D%/packages/patches/icu4c-CVE-2020-10531.patch \
%D%/packages/patches/id3lib-CVE-2007-4460.patch \
%D%/packages/patches/id3lib-UTF16-writing-bug.patch \
+ %D%/packages/patches/idris-disable-test.patch \
%D%/packages/patches/ilmbase-fix-tests.patch \
%D%/packages/patches/inetutils-hurd.patch \
%D%/packages/patches/inkscape-poppler-0.76.patch \
%D%/packages/patches/intel-xed-fix-nondeterminism.patch \
%D%/packages/patches/intltool-perl-compatibility.patch \
%D%/packages/patches/iputils-libcap-compat.patch \
+ %D%/packages/patches/ipxe-reproducible-geniso.patch \
%D%/packages/patches/irrlicht-use-system-libs.patch \
%D%/packages/patches/isl-0.11.1-aarch64-support.patch \
%D%/packages/patches/json-c-CVE-2020-12762.patch \
@@ -1383,6 +1388,7 @@ dist_patch_DATA = \
%D%/packages/patches/mupen64plus-video-z64-glew-correct-path.patch \
%D%/packages/patches/musl-cross-locale.patch \
%D%/packages/patches/mutt-store-references.patch \
+ %D%/packages/patches/mutt-CVE-2021-3181.patch \
%D%/packages/patches/m4-gnulib-libio.patch \
%D%/packages/patches/ncompress-fix-softlinks.patch \
%D%/packages/patches/netcdf-date-time.patch \
@@ -1491,7 +1497,6 @@ dist_patch_DATA = \
%D%/packages/patches/plib-CVE-2011-4620.patch \
%D%/packages/patches/plib-CVE-2012-4552.patch \
%D%/packages/patches/plotutils-spline-test.patch \
- %D%/packages/patches/podofo-cmake-3.12.patch \
%D%/packages/patches/portaudio-audacity-compat.patch \
%D%/packages/patches/portmidi-modular-build.patch \
%D%/packages/patches/postgresql-disable-resolve_symlinks.patch \
@@ -1580,7 +1585,7 @@ dist_patch_DATA = \
%D%/packages/patches/readline-6.2-CVE-2014-2524.patch \
%D%/packages/patches/renpy-use-system-fribidi.patch \
%D%/packages/patches/reposurgeon-add-missing-docbook-files.patch \
- %D%/packages/patches/r-httpuv-1.5.4-unvendor-libuv.patch \
+ %D%/packages/patches/r-httpuv-1.5.5-unvendor-libuv.patch \
%D%/packages/patches/ri-li-modernize_cpp.patch \
%D%/packages/patches/ripperx-missing-file.patch \
%D%/packages/patches/rpcbind-CVE-2017-8779.patch \
@@ -1667,8 +1672,10 @@ dist_patch_DATA = \
%D%/packages/patches/thefuck-test-environ.patch \
%D%/packages/patches/tidy-CVE-2015-5522+5523.patch \
%D%/packages/patches/tinyxml-use-stl.patch \
+ %D%/packages/patches/tipp10-disable-downloader.patch \
%D%/packages/patches/tipp10-fix-compiling.patch \
%D%/packages/patches/tipp10-remove-license-code.patch \
+ %D%/packages/patches/tipp10-qt5.patch \
%D%/packages/patches/tk-find-library.patch \
%D%/packages/patches/transcode-ffmpeg.patch \
%D%/packages/patches/transmission-honor-localedir.patch \
@@ -1703,7 +1710,6 @@ dist_patch_DATA = \
%D%/packages/patches/vboot-utils-fix-format-load-address.patch \
%D%/packages/patches/vboot-utils-fix-tests-show-contents.patch \
%D%/packages/patches/vboot-utils-skip-test-workbuf.patch \
- %D%/packages/patches/vcflib-use-shared-libraries.patch \
%D%/packages/patches/vlc-qt-5.15.patch \
%D%/packages/patches/vigra-python-compat.patch \
%D%/packages/patches/vinagre-newer-freerdp.patch \
diff --git a/gnu/packages/admin.scm b/gnu/packages/admin.scm
index 375073363f..87b0f36cc1 100644
--- a/gnu/packages/admin.scm
+++ b/gnu/packages/admin.scm
@@ -267,7 +267,8 @@ and provides a \"top-like\" mode (monitoring).")
"0x9zr0x3xvk4qkb6jnda451d5iyrl06cz1bjzjsm0lxvjj3fabyk"))))
(build-system gnu-build-system)
(arguments
- '(#:configure-flags '("--localstatedir=/var")))
+ '(#:configure-flags '("--localstatedir=/var")
+ #:make-flags '("GUILE_AUTO_COMPILE=0")))
(native-inputs
`(("pkg-config" ,pkg-config)
@@ -297,7 +298,8 @@ interface and is based on GNU Guile.")
`(("pkg-config" ,pkg-config)
("guile" ,guile-2.2)))
(inputs
- `(("guile" ,guile-2.2)))))
+ `(("guile" ,guile-2.2)
+ ("guile2.2-readline" ,guile2.2-readline)))))
(define-public guile3.0-shepherd
(deprecated-package "guile3.0-shepherd" shepherd))
@@ -307,10 +309,21 @@ interface and is based on GNU Guile.")
(inherit shepherd)
(name "guile2.0-shepherd")
(native-inputs
- `(("pkg-config" ,pkg-config)
+ `(("help2man" ,help2man)
+ ("pkg-config" ,pkg-config)
("guile" ,guile-2.0)))
(inputs
- `(("guile" ,guile-2.0)))))
+ `(("guile" ,guile-2.0)))
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'patch-source
+ (lambda _
+ ;; (ice-9 threads) isn't available in guile-2.0
+ (substitute* "modules/shepherd.scm"
+ ((".*\\(ice-9 threads\\).*") ""))
+ #t)))
+ ,@(package-arguments shepherd)))))
(define-public cloud-utils
(package
@@ -445,7 +458,7 @@ graphs and can export its output to different formats.")
(define-public facter
(package
(name "facter")
- (version "4.0.47")
+ (version "4.0.49")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -454,7 +467,7 @@ graphs and can export its output to different formats.")
(file-name (git-file-name name version))
(sha256
(base32
- "1zz5kk3ad1jj8y939369dfvjh7zqwpkcqzzad7yb6wp01rc5sf88"))))
+ "0l7gic5ql5xiy5s6rb0j9ydyaal5bcxl10bx45khcgdr9zg16pb1"))))
(build-system ruby-build-system)
(arguments
`(#:phases
@@ -516,7 +529,7 @@ or via the @code{facter} Ruby library.")
(define-public htop
(package
(name "htop")
- (version "3.0.4")
+ (version "3.0.5")
(source
(origin
(method git-fetch)
@@ -524,7 +537,7 @@ or via the @code{facter} Ruby library.")
(url "https://github.com/htop-dev/htop")
(commit version)))
(sha256
- (base32 "1fckfv96vzqjs3lzy0cgwsqv5vh1sxca3fhvgskmnkvr5bq6cia9"))
+ (base32 "10lp6cbfvigzp6pq5nwj3s3l4vs7cv92krz2r08nwrz8vl6rqdzp"))
(file-name (git-file-name name version))))
(build-system gnu-build-system)
(inputs
@@ -1402,7 +1415,7 @@ system administrator.")
(define-public sudo
(package
(name "sudo")
- (version "1.9.4p2")
+ (version "1.9.5p1")
(source (origin
(method url-fetch)
(uri
@@ -1412,7 +1425,7 @@ system administrator.")
version ".tar.gz")))
(sha256
(base32
- "0r0g8z289ipw0zpkhmm33cpfm42j01jds2q1wilhh3flg7xg2jn3"))
+ "10kqdfbfpf3vk5ihz5gwynv4pxdf1lg6ircrlanyygb549yg7pad"))
(modules '((guix build utils)))
(snippet
'(begin
@@ -1862,7 +1875,7 @@ module slots, and the list of I/O ports (e.g. serial, parallel, USB).")
(define-public acpica
(package
(name "acpica")
- (version "20201217")
+ (version "20210105")
(source (origin
(method url-fetch)
(uri (string-append
@@ -1870,7 +1883,7 @@ module slots, and the list of I/O ports (e.g. serial, parallel, USB).")
version ".tar.gz"))
(sha256
(base32
- "06rdpfjmij5nni1x2wi1gnalhsza5yxq1viskjm9r11wmsjnxm2a"))))
+ "1gi7qzfywg118g5nlqn5lawxk25pg2sz01gmbz40vvmikks4ri9r"))))
(build-system gnu-build-system)
(native-inputs `(("flex" ,flex)
("bison" ,bison)))
@@ -2611,14 +2624,14 @@ done with the @code{auditctl} utility.")
(define-public nmap
(package
(name "nmap")
- (version "7.91")
+ (version "7.80")
(source (origin
(method url-fetch)
(uri (string-append "https://nmap.org/dist/nmap-" version
".tar.bz2"))
(sha256
(base32
- "001kb5xadqswyw966k2lqi6jr6zz605jpp9w4kmm272if184pk0q"))
+ "1aizfys6l9f9grm82bk878w56mg0zpkfns3spzj157h98875mypw"))
(modules '((guix build utils)))
(snippet
'(begin
@@ -2696,7 +2709,7 @@ advanced netcat implementation (ncat), a utility for comparing scan
results (ndiff), and a packet generation and response analysis tool (nping).")
;; This package uses nmap's bundled versions of libdnet and liblinear, which
;; both use a 3-clause BSD license.
- (license (list license:npsl license:bsd-3))))
+ (license (list license:nmap license:bsd-3))))
(define-public dstat
(package
@@ -3617,7 +3630,7 @@ Python loading in HPC environments.")
(let ((real-name "inxi"))
(package
(name "inxi-minimal")
- (version "3.2.01-1")
+ (version "3.2.02-2")
(source
(origin
(method git-fetch)
@@ -3626,7 +3639,7 @@ Python loading in HPC environments.")
(commit version)))
(file-name (git-file-name real-name version))
(sha256
- (base32 "15bakrv3jzj5h88c3bd0cfhh6hb8b4hm79924k1ygn29sqzgyw65"))))
+ (base32 "0fwx798v9kwiwkgbj97w6rjdanwf7ap65vvq1fqy7gd9x78xcxsq"))))
(build-system trivial-build-system)
(inputs
`(("bash" ,bash-minimal)
@@ -4306,3 +4319,30 @@ This program allows you to view and manipulate this EEPROM list.")
(home-page "https://github.com/xobs/novena-eeprom/")
(supported-systems '("armhf-linux"))
(license license:bsd-3)))
+
+(define-public lrzsz
+ (package
+ (name "lrzsz")
+ (version "0.12.20")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://www.ohse.de/uwe/releases/lrzsz-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "1wcgfa9fsigf1gri74gq0pa7pyajk12m4z69x7ci9c6x9fqkd2y2"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (replace 'configure
+ (lambda* (#:key outputs #:allow-other-keys)
+ (setenv "CONFIG_SHELL" (which "bash"))
+ (invoke "./configure"
+ (string-append "--prefix="
+ (assoc-ref outputs "out"))))))))
+ (synopsis "Implementation of XMODEM/YMODEM/ZMODEM transfer protocols")
+ (description "This package provides programs that transfer files using
+the XMODEM/YMODEM/ZMODEM file transfer protocols.")
+ (home-page "https://ohse.de/uwe/software/lrzsz.html")
+ (license license:gpl2+)))
diff --git a/gnu/packages/algebra.scm b/gnu/packages/algebra.scm
index 214878949e..4699f766b5 100644
--- a/gnu/packages/algebra.scm
+++ b/gnu/packages/algebra.scm
@@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2012, 2013, 2014, 2015, 2016, 2017, 2018, 2019 Andreas Enge <andreas@enge.fr>
-;;; Copyright © 2013, 2015, 2017, 2018 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2013, 2015, 2017, 2018, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016, 2017, 2018, 2019, 2020, 2021 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2014, 2018 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016, 2018, 2019 Ricardo Wurmus <rekado@elephly.net>
@@ -327,9 +327,9 @@ GP2C, the GP to C compiler, translates GP scripts to PARI programs.")
(version "1.0")
(source (origin
(method url-fetch)
- (uri (string-append
- "https://gforge.inria.fr/frs/download.php/33497/cmh-"
- version ".tar.gz"))
+ ;; Git repo at <https://gitlab.inria.fr/cmh/cmh>.
+ (uri (string-append "http://www.multiprecision.org/downloads/cmh-"
+ version ".tar.gz"))
(sha256
(base32
"1a28xr9bs0igms0ik99x0w8lnb0jyfcmvyi26pbyh9ggcdivd33p"))))
@@ -349,13 +349,12 @@ varieties, i.e. Jacobians of hyperelliptic curves.
It can also be used to compute theta constants at arbitrary
precision.")
(license license:gpl3+)
- (home-page
- "https://gitlab.inria.fr/cmh/cmh#cmh-computation-of-genus-2-class-polynomials")))
+ (home-page "http://www.multiprecision.org/cmh/home.html")))
(define-public giac
(package
(name "giac")
- (version "1.6.0-41")
+ (version "1.6.0-47")
(source
(origin
(method url-fetch)
@@ -367,7 +366,7 @@ precision.")
"~parisse/debian/dists/stable/main/source/"
"giac_" version ".tar.gz"))
(sha256
- (base32 "1z5b3jm6ffxk3yvdqzwn9icbna68brkrz5kspgacq823d03jfklc"))))
+ (base32 "15sgsr8l6njp5spagbqclqkdy3x7ra23wi6wvpc8vzlbivy3v43k"))))
(build-system gnu-build-system)
(arguments
`(#:modules ((ice-9 ftw)
@@ -674,9 +673,11 @@ geometry and singularity theory.")
(version "7.0.4")
(source (origin
(method url-fetch)
- ;; Use the ‘Latest version’ link for a stable URI across releases.
- (uri (string-append "https://gforge.inria.fr/frs/download.php/"
- "latestfile/160/ecm-" version ".tar.gz"))
+ (uri
+ (let ((hash "00c4c691a1ef8605b65bdf794a71539d"))
+ (string-append "https://gitlab.inria.fr/zimmerma/ecm/"
+ "uploads/" hash "/ecm-" version
+ ".tar.gz")))
(sha256 (base32
"0hxs24c2m3mh0nq1zz63z3sb7dhy1rilg2s1igwwcb26x3pb7xqc"))))
(build-system gnu-build-system)
diff --git a/gnu/packages/aspell.scm b/gnu/packages/aspell.scm
index 76089333ce..26c0cf4332 100644
--- a/gnu/packages/aspell.scm
+++ b/gnu/packages/aspell.scm
@@ -476,14 +476,14 @@ under permissive licensing terms. See the 'Copyright' file."))))
(define-public ispell
(package
(name "ispell")
- (version "3.4.01")
+ (version "3.4.02")
(source
(origin
(method url-fetch)
(uri (string-append "https://www.cs.hmc.edu/~geoff/tars/ispell-"
version ".tar.gz"))
(sha256
- (base32 "103vscg4bc7x2q84y18x1l75k54yhkw8lpza3qh8xxhcz5b0w7jb"))))
+ (base32 "0b6rqzqjdhwf323sf1dv8qzx5pxa5asz618922r59zjp65660yb6"))))
(build-system gnu-build-system)
(arguments
`(#:parallel-build? #f
diff --git a/gnu/packages/assembly.scm b/gnu/packages/assembly.scm
index aaf70967ab..55a1be8d54 100644
--- a/gnu/packages/assembly.scm
+++ b/gnu/packages/assembly.scm
@@ -2,7 +2,7 @@
;;; Copyright © 2016 Jan Nieuwenhuizen <janneke@gnu.org>
;;; Copyright © 2013, 2015 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2013 Andreas Enge <andreas@enge.fr>
-;;; Copyright © 2016, 2020 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Guy Fleury Iteriteka <hoonandon@gmail.com>
;;; Copyright © 2019 Andy Tai <atai@atai.org>
@@ -26,6 +26,7 @@
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu packages assembly)
+ #:use-module (guix build-system meson)
#:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)
#:use-module (guix download)
@@ -148,6 +149,38 @@ to the clients.")
(home-page "https://www.gnu.org/software/lightning/")
(license license:gpl3+)))
+(define-public simde
+ (package
+ (name "simde")
+ (version "0.7.0")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/simd-everywhere/simde")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1xf5xfzkk9rj47cichgz5ni8xs9hbpz5p6fmxr4ij721ffd002k3"))
+ (modules '((guix build utils)))
+ (snippet
+ '(begin
+ ;; Fix the version string
+ (substitute* "meson.build"
+ (("0.7.0-rc2") "0.7.0"))
+ #t))))
+ (build-system meson-build-system)
+ ;; We really want this for the headers, and the tests require a bundled library.
+ (arguments '(#:configure-flags '("-Dtests=false")))
+ (synopsis "Implementations of SIMD instruction sets for foreign systems")
+ (description "The SIMDe header-only library provides fast, portable
+implementations of SIMD intrinsics on hardware which doesn't natively support
+them, such as calling SSE functions on ARM. There is no performance penalty if
+the hardware supports the native implementation (e.g., SSE/AVX runs at full
+speed on x86, NEON on ARM, etc.).")
+ (home-page "https://simd-everywhere.github.io/blog/")
+ (license license:expat)))
+
(define-public fasm
(package
(name "fasm")
diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index 9485fe600f..0e1a55481f 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -5,6 +5,7 @@
;;; Copyright © 2019 by Amar Singh <nly@disroot.org>
;;; Copyright © 2020 R Veera Kumar <vkor@vkten.in>
;;; Copyright © 2020 Guillaume Le Vaillant <glv@posteo.net>
+;;; Copyright © 2021 Sharlatan Hellseher <sharlatanus@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -51,6 +52,7 @@
#:use-module (gnu packages xorg)
#:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)
+ #:use-module (ice-9 match)
#:use-module (srfi srfi-1))
(define-public cfitsio
@@ -156,6 +158,52 @@ header.")
programs for the manipulation and analysis of astronomical data.")
(license license:gpl3+)))
+(define-public sextractor
+ (package
+ (name "sextractor")
+ (version "2.25.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/astromatic/sextractor")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0q69n3nyal57h3ik2xirwzrxzljrwy9ivwraxzv9566vi3n4z5mw"))))
+ (build-system gnu-build-system)
+ ;; NOTE: (Sharlatan-20210124T103117+0000): Building with `atlas' is failing
+ ;; due to missing shared library which required on configure phase. Switch
+ ;; build to use `openblas' instead. It requires FFTW with single precision
+ ;; `fftwf'.
+ (arguments
+ `(#:configure-flags
+ (list
+ "--enable-openblas"
+ (string-append
+ "--with-openblas-libdir=" (assoc-ref %build-inputs "openblas") "/lib")
+ (string-append
+ "--with-openblas-incdir=" (assoc-ref %build-inputs "openblas") "/include")
+ (string-append
+ "--with-fftw-libdir=" (assoc-ref %build-inputs "fftw") "/lib")
+ (string-append
+ "--with-fftw-incdir=" (assoc-ref %build-inputs "fftw") "/include"))))
+ (native-inputs
+ `(("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("libtool" ,libtool)))
+ (inputs
+ `(("openblas" ,openblas)
+ ("fftw" ,fftwf)))
+ (home-page "http://www.astromatic.net/software/sextractor")
+ (synopsis "Extract catalogs of sources from astronomical images")
+ (description
+ "SExtractor is a program that builds a catalogue of objects from an
+astronomical image. Although it is particularly oriented towards reduction of
+large scale galaxy-survey data, it can perform reasonably well on moderately
+crowded star fields.")
+ (license license:gpl3+)))
+
(define-public stellarium
(package
(name "stellarium")
@@ -299,6 +347,55 @@ Mechanics, Astrometry and Astrodynamics library.")
(license (list license:lgpl2.0+
license:gpl2+)))) ; examples/transforms.c & lntest/*.c
+(define-public libpasastro
+ ;; NOTE: (Sharlatan-20210122T215921+0000): the version tag has a build
+ ;; error on spice which is resolved with the latest commit.
+ (let ((commit "e3c218d1502a18cae858c83a9a8812ab197fcb60")
+ (revision "1"))
+ (package
+ (name "libpasastro")
+ (version (git-version "1.4.0" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/pchev/libpasastro")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "0asp2sn34nds5va2ghppwc41vb6j3d1mf049j949rgrll817kx47"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:tests? #f
+ #:make-flags
+ (list
+ ,(match (or (%current-target-system) (%current-system))
+ ((or "aarch64-linux" "armhf-linux" "i686-linux" "x86_64-linux")
+ "OS_TARGET=linux")
+ (_ #f))
+ ,(match (or (%current-target-system) (%current-system))
+ ("i686-linux" "CPU_TARGET=i386")
+ ("x86_64-linux" "CPU_TARGET=x86_64")
+ ((or "armhf-linux" "aarch64-linux") "CPU_TARGET=armv7l")
+ (_ #f))
+ (string-append "PREFIX=" (assoc-ref %outputs "out")))
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure))))
+ (home-page "https://github.com/pchev/libpasastro")
+ (synopsis "Interface to astronomy library for use from Pascal program")
+ (description
+ "This package provides shared libraries to interface Pascal program with
+standard astronomy libraries:
+
+@itemize
+@item @code{libpasgetdss.so}: Interface with GetDSS to work with DSS images.
+@item @code{libpasplan404.so}: Interface with Plan404 to compute planets position.
+@item @code{libpaswcs.so}: Interface with libwcs to work with FITS WCS.
+@item @code{libpasspice.so}: To work with NAIF/SPICE kernel.
+@end itemize\n")
+ (license license:gpl2+))))
+
(define-public xplanet
(package
(name "xplanet")
diff --git a/gnu/packages/audio.scm b/gnu/packages/audio.scm
index 6fe441faae..2e46dc3a26 100644
--- a/gnu/packages/audio.scm
+++ b/gnu/packages/audio.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.com>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015 Alex Kost <alezost@gmail.com>
@@ -4134,6 +4134,63 @@ the following features:
")
(license license:lgpl3+)))
+(define-public lv2-speech-denoiser
+ (let ((commit "04cfba929630404f8d4f4ca5bac8d9b09a99152f")
+ (revision "1"))
+ (package
+ (name "lv2-speech-denoiser")
+ (version (git-version "0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/lucianodato/speech-denoiser/")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "189l6lz8sz5vr6bjyzgcsrvksl1w6crqsg0q65r94b5yjsmjnpr4"))))
+ (build-system meson-build-system)
+ (arguments
+ `(#:meson ,meson-0.55
+ ;; Using a "release" build is recommended for performance
+ #:build-type "release"
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'patch-meson-build
+ (lambda _
+ (substitute* "meson.build"
+ (("install_folder = 'sdenoise.lv2'")
+ "install_folder = 'lib/lv2/sdenoise.lv2'")
+ (("build/manifest.ttl") "../build/manifest.ttl"))
+ #t))
+ (add-after 'unpack 'build-rnnoise
+ (lambda _
+ (with-directory-excursion "rnnoise"
+ (let ((old-CFLAGS (getenv "CFLAGS")))
+ (setenv "CFLAGS" "-fvisibility=hidden -fPIC -Wl,--exclude-libs,ALL")
+ (setenv "CONFIG_SHELL" (which "bash"))
+ (invoke "autoreconf" "-vif")
+ (invoke "sh" "configure"
+ "--disable-examples"
+ "--disable-doc"
+ "--disable-shared"
+ "--enable-static")
+ (invoke "make")
+ (setenv "CFLAGS" old-CFLAGS))))))))
+ (inputs
+ `(("lv2" ,lv2)))
+ (native-inputs
+ `(("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("libtool" ,libtool)
+ ("pkg-config" ,pkg-config)))
+ (home-page "https://github.com/werman/noise-suppression-for-voice")
+ (synopsis "Speech denoise LV2 plugin based on Xiph's RNNoise library")
+ (description "RNNoise is a library that uses deep learning to apply
+noise supression to audio sources with voice presence. This package provides
+an LV2 audio plugin.")
+ (license license:lgpl3+))))
+
(define-public cli-visualizer
(package
(name "cli-visualizer")
diff --git a/gnu/packages/autotools.scm b/gnu/packages/autotools.scm
index 203f1bfb52..6074379c46 100644
--- a/gnu/packages/autotools.scm
+++ b/gnu/packages/autotools.scm
@@ -11,6 +11,7 @@
;;; Copyright © 2018 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2019 Pierre-Moana Levesque <pierre.moana.levesque@gmail.com>
;;; Copyright © 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
+;;; Copyright © 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -38,6 +39,7 @@
#:use-module (guix utils)
#:use-module (guix packages)
#:use-module (guix download)
+ #:use-module (guix git-download)
#:use-module (guix build-system gnu)
#:use-module (guix build-system trivial)
#:use-module (ice-9 match)
@@ -491,6 +493,53 @@ complexity of working with shared libraries across platforms.")
(license gpl3+)
(home-page "https://www.gnu.org/software/libtool/")))
+(define-public config
+ (let ((revision "1")
+ (commit "c8ddc8472f8efcadafc1ef53ca1d863415fddd5f"))
+ (package
+ (name "config")
+ (version (git-version "0.0.0" revision commit)) ;no release tag
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://git.savannah.gnu.org/git/config.git/")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "0x6ycvkmmhhhag97wsf0pw8n5fvh12rjvrck90rz17my4ys16qwv"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:phases (modify-phases %standard-phases
+ (add-after 'unpack 'patch-/bin/sh
+ (lambda _
+ (substitute* "testsuite/config-guess.sh"
+ (("#!/bin/sh")
+ (string-append "#!" (which "sh"))))
+ #t))
+ (replace 'build
+ (lambda _
+ (invoke "make" "manpages")))
+ (delete 'configure)
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (bin (string-append out "/bin"))
+ (man1 (string-append out "/share/man/man1")))
+ (install-file "config.guess" bin)
+ (install-file "config.sub" bin)
+ (install-file "doc/config.guess.1" man1)
+ (install-file "doc/config.sub.1" man1)
+ #t))))))
+ (native-inputs
+ `(("help2man" ,help2man)))
+ (home-page "https://savannah.gnu.org/projects/config")
+ (synopsis "Ubiquitious config.guess and config.sub scripts")
+ (description "The `config.guess' script tries to guess a canonical system triple,
+and `config.sub' validates and canonicalizes. These are used as part of
+configuration in nearly all GNU packages (and many others).")
+ (license gpl2+))))
+
(define-public libltdl
;; This is a libltdl package separate from the libtool package. This is
;; useful because, unlike libtool, it has zero extra dependencies (making it
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 512abcd8fd..8514306f94 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4,14 +4,14 @@
;;; Copyright © 2015, 2016, 2018, 2019, 2020 Pjotr Prins <pjotr.guix@thebird.nl>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2016, 2020 Roel Janssen <roel@gnu.org>
-;;; Copyright © 2016, 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2017, 2018, 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016, 2020 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2016, 2018 Raoul Bonnal <ilpuccio.febo@gmail.com>
;;; Copyright © 2017, 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
;;; Copyright © 2018 Gábor Boskovits <boskovits@gmail.com>
-;;; Copyright © 2018, 2019, 2020 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
+;;; Copyright © 2018, 2019, 2020, 2021 Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de>
;;; Copyright © 2019, 2020 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2019 Brian Leung <bkleung89@gmail.com>
;;; Copyright © 2019 Brett Gilio <brettg@gnu.org>
@@ -57,6 +57,7 @@
#:use-module (guix build-system trivial)
#:use-module (guix deprecation)
#:use-module (gnu packages)
+ #:use-module (gnu packages assembly)
#:use-module (gnu packages autotools)
#:use-module (gnu packages algebra)
#:use-module (gnu packages base)
@@ -142,6 +143,7 @@
#:use-module (gnu packages xml)
#:use-module (gnu packages xorg)
#:use-module (srfi srfi-1)
+ #:use-module (srfi srfi-26)
#:use-module (ice-9 match))
(define-public aragorn
@@ -3563,61 +3565,60 @@ comment or quality sections.")
(define-public gemma
(package
(name "gemma")
- (version "0.98")
+ (version "0.98.3")
(source (origin
(method git-fetch)
(uri (git-reference
- (url "https://github.com/xiangzhou/GEMMA")
- (commit (string-append "v" version))))
+ (url "https://github.com/genetics-statistics/GEMMA")
+ (commit version)))
(file-name (git-file-name name version))
(sha256
(base32
- "1s3ncnbn45r2hh1cvrqky1kbqq6546biypr4f5mkw1kqlrgyh0yg"))))
+ "1p8a7kkfn1mmrg017aziy544aha8i9h6wd1x2dk3w2794wl33qb7"))
+ (modules '((guix build utils)))
+ (snippet
+ '(begin
+ (delete-file-recursively "contrib")
+ #t))))
+ (build-system gnu-build-system)
(inputs
- `(("eigen" ,eigen)
- ("gfortran" ,gfortran "lib")
- ("gsl" ,gsl)
- ("lapack" ,lapack)
+ `(("gsl" ,gsl)
("openblas" ,openblas)
("zlib" ,zlib)))
- (build-system gnu-build-system)
+ (native-inputs
+ `(("catch" ,catch-framework2-1)
+ ("perl" ,perl)
+ ("shunit2" ,shunit2)
+ ("which" ,which)))
(arguments
- `(#:make-flags
- '(,@(match (%current-system)
- ("x86_64-linux"
- '("FORCE_DYNAMIC=1"))
- ("i686-linux"
- '("FORCE_DYNAMIC=1" "FORCE_32BIT=1"))
- (_
- '("FORCE_DYNAMIC=1" "NO_INTEL_COMPAT=1"))))
- #:phases
+ `(#:phases
(modify-phases %standard-phases
(delete 'configure)
- (add-after 'unpack 'find-eigen
+ (add-after 'unpack 'prepare-build
(lambda* (#:key inputs #:allow-other-keys)
- ;; Ensure that Eigen headers can be found
- (setenv "CPLUS_INCLUDE_PATH"
- (string-append (assoc-ref inputs "eigen")
- "/include/eigen3"))
+ (mkdir-p "bin")
+ (substitute* "Makefile"
+ (("/usr/local/opt/openblas")
+ (assoc-ref inputs "openblas")))
#t))
- (add-before 'build 'bin-mkdir
- (lambda _
- (mkdir-p "bin")
- #t))
+ (replace 'check
+ (lambda* (#:key tests? #:allow-other-keys)
+ (when tests?
+ ;; 'make slow-check' expects shunit2-2.0.3.
+ (with-directory-excursion "test"
+ (invoke "./test_suite.sh"))
+ #t)))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
- (let ((out (assoc-ref outputs "out")))
- (install-file "bin/gemma"
- (string-append
- out "/bin")))
- #t)))
- #:tests? #f)) ; no tests included yet
- (home-page "https://github.com/xiangzhou/GEMMA")
+ (install-file "bin/gemma"
+ (string-append (assoc-ref outputs "out") "/bin"))
+ #t)))))
+ (home-page "https://github.com/genetics-statistics/GEMMA")
(synopsis "Tool for genome-wide efficient mixed model association")
(description
- "Genome-wide Efficient Mixed Model Association (GEMMA) provides a
-standard linear mixed model resolver with application in genome-wide
-association studies (GWAS).")
+ "@acronym{GEMMA, Genome-wide Efficient Mixed Model Association} provides a
+standard linear mixed model resolver with application in @acronym{GWAS,
+genome-wide association studies}.")
(license license:gpl3)))
(define-public grit
@@ -4687,7 +4688,7 @@ sequencing tag position and orientation.")
(define-public mafft
(package
(name "mafft")
- (version "7.471")
+ (version "7.475")
(source (origin
(method url-fetch)
(uri (string-append
@@ -4696,7 +4697,7 @@ sequencing tag position and orientation.")
(file-name (string-append name "-" version ".tgz"))
(sha256
(base32
- "0r1973fx2scq4712zdqfy67wkzqj0c0bhrdy4jxhvq40mdxyry30"))))
+ "0i2i2m3blh2xkbkdk48hxfssks30ny0v381gdl7zwhcvp0axs26r"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; no automated tests, though there are tests in the read me
@@ -7073,6 +7074,55 @@ sequence.")
(supported-systems '("i686-linux" "x86_64-linux"))
(license license:bsd-3)))
+(define-public r-snapatac
+ (package
+ (name "r-snapatac")
+ (version "2.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/r3fang/SnapATAC")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "037jzlbl436fi7lkpq7d83i2vd1crnrik3vac2x6xj75dbikb2av"))))
+ (properties `((upstream-name . "SnapATAC")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-bigmemory" ,r-bigmemory)
+ ("r-doparallel" ,r-doparallel)
+ ("r-dosnow" ,r-dosnow)
+ ("r-edger" ,r-edger)
+ ("r-foreach" ,r-foreach)
+ ("r-genomicranges" ,r-genomicranges)
+ ("r-igraph" ,r-igraph)
+ ("r-iranges" ,r-iranges)
+ ("r-irlba" ,r-irlba)
+ ("r-matrix" ,r-matrix)
+ ("r-plyr" ,r-plyr)
+ ("r-plot3d" ,r-plot3d)
+ ("r-rann" ,r-rann)
+ ("r-raster" ,r-raster)
+ ("r-rcolorbrewer" ,r-rcolorbrewer)
+ ("r-rhdf5" ,r-rhdf5)
+ ("r-rtsne" ,r-rtsne)
+ ("r-scales" ,r-scales)
+ ("r-viridis" ,r-viridis)))
+ (home-page "https://github.com/r3fang/SnapATAC")
+ (synopsis "Single nucleus analysis package for ATAC-Seq")
+ (description
+ "This package provides a fast and accurate analysis toolkit for single
+cell ATAC-seq (Assay for transposase-accessible chromatin using sequencing).
+Single cell ATAC-seq can resolve the heterogeneity of a complex tissue and
+reveal cell-type specific regulatory landscapes. However, the exceeding data
+sparsity has posed unique challenges for the data analysis. This package
+@code{r-snapatac} is an end-to-end bioinformatics pipeline for analyzing large-
+scale single cell ATAC-seq data which includes quality control, normalization,
+clustering analysis, differential analysis, motif inference and exploration of
+single cell ATAC-seq sequencing data.")
+ (license license:gpl3)))
+
(define-public r-scde
(package
(name "r-scde")
@@ -7726,6 +7776,31 @@ BLAST, KEGG, GenBank, MEDLINE and GO.")
;; (LGPLv2.1+) and scripts in samples (which have GPL2 and GPL2+)
(license (list license:ruby license:lgpl2.1+ license:gpl2+ ))))
+(define-public bio-vcf
+ (package
+ (name "bio-vcf")
+ (version "0.9.5")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (rubygems-uri "bio-vcf" version))
+ (sha256
+ (base32
+ "1glw5pn9s8z13spxk6yyfqaz80n9lga67f33w35nkpq9dwi2vg6g"))))
+ (build-system ruby-build-system)
+ (native-inputs
+ `(("ruby-cucumber" ,ruby-cucumber)))
+ (synopsis "Smart VCF parser DSL")
+ (description
+ "Bio-vcf provides a @acronym{DSL, domain specific language} for processing
+the VCF format. Record named fields can be queried with regular expressions.
+Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf is not
+only very fast for genome-wide (WGS) data, it also comes with a filtering,
+evaluation and rewrite language and can output any type of textual data,
+including VCF header and contents in RDF and JSON.")
+ (home-page "https://github.com/vcflib/bio-vcf")
+ (license license:expat)))
+
(define-public r-biocviews
(package
(name "r-biocviews")
@@ -9386,8 +9461,9 @@ group or two ChIP groups run under different conditions.")
(delete 'configure) ; There is no configure phase.
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
- (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
- (install-file "filevercmp" bin)
+ (let ((out (assoc-ref outputs "out")))
+ (install-file "filevercmp" (string-append out "/bin"))
+ (install-file "filevercmp.h" (string-append out "/include"))
#t))))))
(home-page "https://github.com/ekg/filevercmp")
(synopsis "This program compares version strings")
@@ -10514,41 +10590,20 @@ explore and perform basic analysis of single cell sequencing data coming from
droplet sequencing. It has been particularly tailored for Drop-seq.")
(license license:gpl3))))
-(define htslib-for-sambamba
- (let ((commit "2f3c3ea7b301f9b45737a793c0b2dcf0240e5ee5"))
- (package
- (inherit htslib)
- (name "htslib-for-sambamba")
- (version (string-append "1.3.1-1." (string-take commit 9)))
- (source
- (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/lomereiter/htslib")
- (commit commit)))
- (file-name (string-append "htslib-" version "-checkout"))
- (sha256
- (base32
- "0g38g8s3npr0gjm9fahlbhiskyfws9l5i0x1ml3rakzj7az5l9c9"))))
- (native-inputs
- `(("autoconf" ,autoconf)
- ("automake" ,automake)
- ,@(package-native-inputs htslib))))))
-
(define-public sambamba
(package
(name "sambamba")
- (version "0.7.1")
+ (version "0.8.0")
(source
(origin
(method git-fetch)
(uri (git-reference
- (url "https://github.com/lomereiter/sambamba")
+ (url "https://github.com/biod/sambamba")
(commit (string-append "v" version))))
- (file-name (string-append name "-" version "-checkout"))
+ (file-name (git-file-name name version))
(sha256
(base32
- "111h05b60pj8dxbidiamy4imc92x2962b3lmb7wgysl6lx064qis"))))
+ "07dznzl6m8k7sw84jxw2kx6i3ymrapbmcmyh0fxz8wrybhw8fmwc"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; there is no test target
@@ -10558,52 +10613,30 @@ droplet sequencing. It has been particularly tailored for Drop-seq.")
(delete 'configure)
(add-after 'unpack 'fix-ldc-version
(lambda _
- (substitute* "gen_ldc_version_info.py"
- (("/usr/bin/env.*") (which "python3")))
(substitute* "Makefile"
;; We use ldc2 instead of ldmd2 to compile sambamba.
(("\\$\\(shell which ldmd2\\)") (which "ldc2")))
#t))
- (add-after 'unpack 'place-biod-and-undead
- (lambda* (#:key inputs #:allow-other-keys)
- (copy-recursively (assoc-ref inputs "biod") "BioD")
- #t))
(add-after 'unpack 'unbundle-prerequisites
(lambda _
(substitute* "Makefile"
- (("htslib/libhts.a lz4/lib/liblz4.a")
- "-L-lhts -L-llz4")
- ((" lz4-static htslib-static") ""))
+ (("= lz4/lib/liblz4.a") "= -L-llz4")
+ (("ldc_version_info lz4-static") "ldc_version_info"))
#t))
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
- (let* ((out (assoc-ref outputs "out"))
- (bin (string-append out "/bin")))
+ (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
(mkdir-p bin)
(copy-file (string-append "bin/sambamba-" ,version)
(string-append bin "/sambamba"))
#t))))))
(native-inputs
- `(("ldc" ,ldc)
- ("rdmd" ,rdmd)
- ("python" ,python)
- ("biod"
- ,(let ((commit "7969eb0a847b05874e83ffddead26e193ece8101"))
- (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/biod/BioD")
- (commit commit)))
- (file-name (string-append "biod-"
- (string-take commit 9)
- "-checkout"))
- (sha256
- (base32
- "0mjxsmbmv0jxl3pq21p8j5r829d648if8q58ka50b2956lc6qkpm")))))))
+ `(("python" ,python)))
(inputs
- `(("lz4" ,lz4)
- ("htslib" ,htslib-for-sambamba)))
- (home-page "https://lomereiter.github.io/sambamba/")
+ `(("ldc" ,ldc)
+ ("lz4" ,lz4)
+ ("zlib" ,zlib)))
+ (home-page "https://github.com/biod/sambamba")
(synopsis "Tools for working with SAM/BAM data")
(description "Sambamba is a high performance modern robust and
fast tool (and library), written in the D programming language, for
@@ -14855,10 +14888,14 @@ some of the details of opening and jumping in tabix-indexed files.")
(delete 'configure) ; There is no configure phase.
(replace 'install
(lambda* (#:key outputs #:allow-other-keys)
- (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
+ (let* ((out (assoc-ref outputs "out"))
+ (bin (string-append out "/bin"))
+ (include (string-append out "/include")))
;; TODO: There are Python modules for these programs too.
(install-file "multichoose" bin)
- (install-file "multipermute" bin))
+ (install-file "multipermute" bin)
+ (install-file "multichoose.h" include)
+ (install-file "multipermute.h" include))
#t)))))
(home-page "https://github.com/ekg/multichoose")
(synopsis "Efficient loopless multiset combination generation algorithm")
@@ -14967,32 +15004,44 @@ library automatically handles index file generation and use.")
(define-public vcflib
(package
(name "vcflib")
- (version "1.0.1")
+ (version "1.0.2")
(source
(origin
- (method url-fetch)
- (uri (string-append "https://github.com/vcflib/vcflib/releases/"
- "download/v" version
- "/vcflib-" version "-src.tar.gz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/vcflib/vcflib")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
- (base32 "14zzrg8hg8cq9cvq2wdvp21j7nmxxkjrbagw2apd2yqv2kyx42lm"))
- (patches (search-patches "vcflib-use-shared-libraries.patch"))
+ (base32 "1k1z3876kbzifj1sqfzsf3lgb4rw779hvkg6ryxbyq5bc2paj9kh"))
(modules '((guix build utils)))
(snippet
- `(begin
+ '(begin
+ (substitute* "CMakeLists.txt"
+ ((".*fastahack.*") "")
+ ((".*smithwaterman.*") "")
+ (("(pkg_check_modules\\(TABIXPP)" text)
+ (string-append
+ "pkg_check_modules(FASTAHACK REQUIRED fastahack)\n"
+ "pkg_check_modules(SMITHWATERMAN REQUIRED smithwaterman)\n"
+ text))
+ (("\\$\\{TABIXPP_LIBRARIES\\}" text)
+ (string-append "${FASTAHACK_LIBRARIES} "
+ "${SMITHWATERMAN_LIBRARIES} "
+ text)))
(substitute* (find-files "." "\\.(h|c)(pp)?$")
(("\"SmithWatermanGotoh.h\"") "<smithwaterman/SmithWatermanGotoh.h>")
(("\"convert.h\"") "<smithwaterman/convert.h>")
(("\"disorder.h\"") "<smithwaterman/disorder.h>")
- (("\"tabix.hpp\"") "<tabix.hpp>")
- (("\"Fasta.h\"") "<fastahack/Fasta.h>"))
+ (("Fasta.h") "fastahack/Fasta.h"))
(for-each delete-file-recursively
'("fastahack" "filevercmp" "fsom" "googletest" "intervaltree"
- "libVCFH" "multichoose" "smithwaterman" "tabixpp"))
+ "libVCFH" "multichoose" "smithwaterman"))
#t))))
- (build-system gnu-build-system)
+ (build-system cmake-build-system)
(inputs
- `(("htslib" ,htslib)
+ `(("bzip2" ,bzip2)
+ ("htslib" ,htslib)
("fastahack" ,fastahack)
("perl" ,perl)
("python" ,python)
@@ -15005,22 +15054,20 @@ library automatically handles index file generation and use.")
;; Submodules.
;; This package builds against the .o files so we need to extract the source.
("filevercmp-src" ,(package-source filevercmp))
+ ("fsom-src" ,(package-source fsom))
("intervaltree-src" ,(package-source intervaltree))
("multichoose-src" ,(package-source multichoose))))
(arguments
`(#:tests? #f ; no tests
#:phases
(modify-phases %standard-phases
- (add-after 'unpack 'set-flags
- (lambda* (#:key outputs #:allow-other-keys)
- (substitute* "Makefile"
- (("LDFLAGS =")
- (string-append "LDFLAGS = -Wl,-rpath="
- (assoc-ref outputs "out") "/lib ")))
- (substitute* "filevercmp/Makefile"
- (("-c") "-c -fPIC"))
+ (add-after 'unpack 'build-shared-library
+ (lambda _
+ (substitute* "CMakeLists.txt"
+ (("vcflib STATIC") "vcflib SHARED"))
+ (substitute* "test/Makefile"
+ (("libvcflib.a") "libvcflib.so"))
#t))
- (delete 'configure)
(add-after 'unpack 'unpack-submodule-sources
(lambda* (#:key inputs #:allow-other-keys)
(let ((unpack (lambda (source target)
@@ -15033,39 +15080,31 @@ library automatically handles index file generation and use.")
"--strip-components=1"))))))
(and
(unpack "filevercmp-src" "filevercmp")
+ (unpack "fsom-src" "fsom")
(unpack "intervaltree-src" "intervaltree")
- (unpack "multichoose-src" "multichoose")))))
- (replace 'install
+ (unpack "multichoose-src" "multichoose"))
+ #t)))
+ ;; This pkg-config file is provided by other distributions.
+ (add-after 'install 'install-pkg-config-file
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
- (bin (string-append out "/bin"))
- (lib (string-append out "/lib")))
- (for-each (lambda (file)
- (install-file file bin))
- (find-files "bin" ".*"))
- (install-file "libvcflib.so" lib)
- (install-file "libvcflib.a" lib)
- (for-each
- (lambda (file)
- (install-file file (string-append out "/include")))
- (find-files "include" "\\.h(pp)?$"))
- (mkdir-p (string-append lib "/pkgconfig"))
- (with-output-to-file (string-append lib "/pkgconfig/vcflib.pc")
+ (pkgconfig (string-append out "/lib/pkgconfig")))
+ (mkdir-p pkgconfig)
+ (with-output-to-file (string-append pkgconfig "/libvcflib.pc")
(lambda _
(format #t "prefix=~a~@
exec_prefix=${prefix}~@
libdir=${exec_prefix}/lib~@
includedir=${prefix}/include~@
~@
- ~@
Name: libvcflib~@
Version: ~a~@
Requires: smithwaterman, fastahack~@
Description: C++ library for parsing and manipulating VCF files~@
- Libs: -L${libdir} -lvcflib~@
+ Libs: -L${libdir} -llibvcflib~@
Cflags: -I${includedir}~%"
- out ,version))))
- #t)))))
+ out ,version)))
+ #t))))))
(home-page "https://github.com/vcflib/vcflib/")
(synopsis "Library for parsing and manipulating VCF files")
(description "Vcflib provides methods to manipulate and interpret
@@ -15076,125 +15115,94 @@ manipulations on VCF files.")
(license license:expat)))
(define-public freebayes
- (let ((commit "3ce827d8ebf89bb3bdc097ee0fe7f46f9f30d5fb")
- (revision "1")
- (version "1.0.2"))
- (package
- (name "freebayes")
- (version (git-version version revision commit))
- (source (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/ekg/freebayes")
- (commit commit)))
- (file-name (git-file-name name version))
- (sha256
- (base32 "1sbzwmcbn78ybymjnhwk7qc5r912azy5vqz2y7y81616yc3ba2a2"))))
- (build-system gnu-build-system)
- (inputs
- `(("bamtools" ,bamtools)
- ("htslib" ,htslib)
- ("zlib" ,zlib)))
- (native-inputs
- `(("bc" ,bc) ; Needed for running tests.
- ("samtools" ,samtools) ; Needed for running tests.
- ("parallel" ,parallel) ; Needed for running tests.
- ("perl" ,perl) ; Needed for running tests.
- ("procps" ,procps) ; Needed for running tests.
- ("python" ,python-2) ; Needed for running tests.
- ("vcflib-src" ,(package-source vcflib))
- ;; These are submodules for the vcflib version used in freebayes.
- ;; This package builds against the .o files so we need to extract the source.
- ("tabixpp-src" ,(package-source tabixpp))
- ("smithwaterman-src" ,(package-source smithwaterman))
- ("multichoose-src" ,(package-source multichoose))
- ("fsom-src" ,(package-source fsom))
- ("filevercmp-src" ,(package-source filevercmp))
- ("fastahack-src" ,(package-source fastahack))
- ("intervaltree-src" ,(package-source intervaltree))
- ;; These submodules are needed to run the tests.
- ("bash-tap-src" ,(package-source bash-tap))
- ("test-simple-bash-src"
- ,(origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/ingydotnet/test-simple-bash/")
- (commit "124673ff204b01c8e96b7fc9f9b32ee35d898acc")))
- (file-name "test-simple-bash-src-checkout")
- (sha256
- (base32 "043plp6z0x9yf7mdpky1fw7zcpwn1p47px95w9mh16603zqqqpga"))))))
- (arguments
- `(#:make-flags
- (list "CC=gcc"
- (string-append "BAMTOOLS_ROOT="
- (assoc-ref %build-inputs "bamtools")))
- #:test-target "test"
- #:phases
- (modify-phases %standard-phases
- (delete 'configure)
- (add-after 'unpack 'fix-tests
- (lambda _
- (substitute* "test/t/01_call_variants.t"
- (("grep -P \"\\(\\\\t500\\$\\|\\\\t11000\\$\\|\\\\t1000\\$\\)\"")
- "grep -E ' (500|11000|1000)$'"))
- #t))
- (add-after 'unpack 'unpack-submodule-sources
- (lambda* (#:key inputs #:allow-other-keys)
- (let ((unpack (lambda (source target)
- (with-directory-excursion target
- (if (file-is-directory? (assoc-ref inputs source))
- (copy-recursively (assoc-ref inputs source) ".")
- (invoke "tar" "xvf"
- (assoc-ref inputs source)
- "--strip-components=1"))))))
- (and
- (unpack "vcflib-src" "vcflib")
- (unpack "fastahack-src" "vcflib/fastahack")
- (unpack "filevercmp-src" "vcflib/filevercmp")
- (unpack "fsom-src" "vcflib/fsom")
- (unpack "intervaltree-src" "vcflib/intervaltree")
- (unpack "multichoose-src" "vcflib/multichoose")
- (unpack "smithwaterman-src" "vcflib/smithwaterman")
- (unpack "tabixpp-src" "vcflib/tabixpp")
- (unpack "test-simple-bash-src" "test/test-simple-bash")
- (unpack "bash-tap-src" "test/bash-tap")))))
- (add-after 'unpack-submodule-sources 'fix-makefiles
- (lambda _
- ;; We don't have the .git folder to get the version tag from.
- (substitute* "vcflib/Makefile"
- (("^GIT_VERSION.*")
- (string-append "GIT_VERSION = v" ,version)))
- (substitute* "src/Makefile"
- (("-I\\$\\(BAMTOOLS_ROOT\\)/src")
- "-I$(BAMTOOLS_ROOT)/include/bamtools"))
- #t))
- (add-before 'build 'build-tabixpp-and-vcflib
- (lambda* (#:key inputs make-flags #:allow-other-keys)
- (with-directory-excursion "vcflib"
- (with-directory-excursion "tabixpp"
- (apply invoke "make"
- (string-append "HTS_LIB="
- (assoc-ref inputs "htslib")
- "/lib/libhts.a")
- make-flags))
- (apply invoke "make"
- (string-append "CFLAGS=-Itabixpp")
- "all"
- make-flags))))
- (replace 'install
- (lambda* (#:key outputs #:allow-other-keys)
- (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
- (install-file "bin/freebayes" bin)
- (install-file "bin/bamleftalign" bin))
- #t)))))
- (home-page "https://github.com/ekg/freebayes")
- (synopsis "Haplotype-based variant detector")
- (description "FreeBayes is a Bayesian genetic variant detector designed to
+ (package
+ (name "freebayes")
+ (version "1.3.3")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/freebayes/freebayes")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0myz3giad7jqp6ricdfnig9ymlcps2h67mlivadvx97ngagm85z8"))
+ (patches (search-patches "freebayes-devendor-deps.patch"))
+ (modules '((guix build utils)))
+ (snippet
+ '(begin
+ (delete-file-recursively "contrib/htslib")
+ #t))))
+ (build-system meson-build-system)
+ (inputs
+ `(("fastahack" ,fastahack)
+ ("htslib" ,htslib)
+ ("smithwaterman" ,smithwaterman)
+ ("tabixpp" ,tabixpp)
+ ("vcflib" ,vcflib)
+ ("zlib" ,zlib)))
+ (native-inputs
+ `(("bash-tap" ,bash-tap)
+ ("bc" ,bc)
+ ("grep" ,grep) ; Built with perl support.
+ ("parallel" ,parallel)
+ ("perl" ,perl)
+ ("pkg-config" ,pkg-config)
+ ("samtools" ,samtools)
+ ("simde" ,simde)
+ ;; This submodule is needed to run the tests.
+ ("test-simple-bash-src"
+ ,(origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/ingydotnet/test-simple-bash/")
+ (commit "124673ff204b01c8e96b7fc9f9b32ee35d898acc")))
+ (file-name "test-simple-bash-src-checkout")
+ (sha256
+ (base32 "043plp6z0x9yf7mdpky1fw7zcpwn1p47px95w9mh16603zqqqpga"))))))
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'patch-source
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((bash-tap (assoc-ref inputs "bash-tap")))
+ (substitute* (find-files "test/t")
+ (("BASH_TAP_ROOT=bash-tap")
+ (string-append "BASH_TAP_ROOT=" bash-tap "/bin"))
+ (("bash-tap/bash-tap-bootstrap")
+ (string-append bash-tap "/bin/bash-tap-bootstrap"))
+ (("source.*bash-tap-bootstrap")
+ (string-append "source " bash-tap "/bin/bash-tap-bootstrap")))
+ (substitute* "meson.build"
+ ;; Some inputs aren't actually needed.
+ ((".*bamtools/src.*") "")
+ ((".*multichoose.*") ""))
+ (substitute* '("src/BedReader.cpp"
+ "src/BedReader.h")
+ (("../intervaltree/IntervalTree.h") "IntervalTree.h"))
+ #t)))
+ (add-after 'unpack 'unpack-submodule-sources
+ (lambda* (#:key inputs #:allow-other-keys)
+ (mkdir-p "test/test-simple-bash")
+ (copy-recursively (assoc-ref inputs "test-simple-bash-src")
+ "test/test-simple-bash")
+ #t))
+ ;; The slow tests take longer than the specified timeout.
+ ,@(if (any (cute string=? <> (%current-system))
+ '("armhf-linux" "aarch64-linux"))
+ '((replace 'check
+ (lambda* (#:key tests? #:allow-other-keys)
+ (when tests?
+ (invoke "meson" "test" "--timeout-multiplier" "5"))
+ #t)))
+ '()))))
+ (home-page "https://github.com/freebayes/freebayes")
+ (synopsis "Haplotype-based variant detector")
+ (description "FreeBayes is a Bayesian genetic variant detector designed to
find small polymorphisms, specifically SNPs (single-nucleotide polymorphisms),
indels (insertions and deletions), MNPs (multi-nucleotide polymorphisms), and
complex events (composite insertion and substitution events) smaller than the
length of a short-read sequencing alignment.")
- (license license:expat))))
+ (license license:expat)))
(define-public samblaster
(package
diff --git a/gnu/packages/bootloaders.scm b/gnu/packages/bootloaders.scm
index 9ca574a151..88abe29a1e 100644
--- a/gnu/packages/bootloaders.scm
+++ b/gnu/packages/bootloaders.scm
@@ -7,12 +7,14 @@
;;; Copyright © 2016, 2017 Danny Milosavljevic <dannym@scratchpost.org>
;;; Copyright © 2016, 2017 David Craven <david@craven.ch>
;;; Copyright © 2017, 2018, 2020 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018, 2019, 2020, 2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 nee <nee@cock.li>
;;; Copyright © 2019 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2020 Björn Höfling <bjoern.hoefling@bjoernhoefling.de>
;;; Copyright © 2018, 2019, 2020 Vagrant Cascadian <vagrant@debian.org>
;;; Copyright © 2020 Pierre Langlois <pierre.langlois@gmx.com>
+;;; Copyright © 2021 Vincent Legoll <vincent.legoll@gmail.com>
+;;; Copyright © 2021 Brice Waegeneire <brice@waegenei.re>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -1095,3 +1097,124 @@ systems so that they can be added to the bootloader. It also works out how to
boot existing GNU/Linux systems and detects what distribution is installed in
order to add a suitable bootloader menu entry.")
(license license:gpl2+)))
+
+(define-public ipxe
+ ;; XXX: 'BUILD_TIMESTAMP' is used to automatically select the newest version
+ ;; of iPXE if multiple iPXE drivers are loaded concurrently in a UEFI system.
+ ;;
+ ;; TODO: Bump this timestamp at each modifications of the package (not only
+ ;; for updates) by running: date +%s.
+ (let ((timestamp "1591706427"))
+ (package
+ (name "ipxe")
+ (version "1.21.1")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/ipxe/ipxe")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (patches (search-patches "ipxe-reproducible-geniso.patch"))
+ (sha256
+ (base32
+ "1pkf1n1c0rdlzfls8fvjvi1sd9xjd9ijqlyz3wigr70ijcv6x8i9"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:modules ((guix build utils)
+ (guix build gnu-build-system)
+ (guix base32)
+ (ice-9 string-fun)
+ (ice-9 regex)
+ (rnrs bytevectors))
+ #:imported-modules ((guix base32)
+ ,@%gnu-build-system-modules)
+ #:make-flags
+ ;; XXX: 'BUILD_ID' is used to determine when another ROM in the
+ ;; system contains identical code in order to save space within the
+ ;; legacy BIOS option ROM area, which is extremely limited in size.
+ ;; It is supposed to be collision-free across all ROMs, to do so we
+ ;; use the truncated output hash of the package.
+ (let ((build-id
+ (lambda (out)
+ (let* ((nix-store (string-append
+ (or (getenv "NIX_STORE") "/gnu/store")
+ "/"))
+ (filename
+ (string-replace-substring out nix-store ""))
+ (hash (match:substring (string-match "[0-9a-z]{32}"
+ filename)))
+ (bv (nix-base32-string->bytevector hash)))
+ (format #f "0x~x"
+ (bytevector-u32-ref bv 0 (endianness big))))))
+ (out (assoc-ref %outputs "out"))
+ (syslinux (assoc-ref %build-inputs "syslinux")))
+ (list "ECHO_E_BIN_ECHO=echo"
+ "ECHO_E_BIN_ECHO_E=echo -e"
+
+ ;; cdrtools' mkisofs will silently ignore a missing isolinux.bin!
+ ;; Luckily xorriso is more strict.
+ (string-append "ISOLINUX_BIN=" syslinux
+ "/share/syslinux/isolinux.bin")
+ (string-append "SYSLINUX_MBR_DISK_PATH=" syslinux
+ "/share/syslinux/isohdpfx.bin")
+
+ ;; Build reproducibly.
+ (string-append "BUILD_ID_CMD=echo -n " (build-id out))
+ (string-append "BUILD_TIMESTAMP=" ,timestamp)
+ "everything"))
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'enter-source-directory
+ (lambda _ (chdir "src") #t))
+ (add-after 'enter-source-directory 'set-options
+ (lambda _
+ (substitute* "config/general.h"
+ (("^//(#define PING_CMD.*)" _ uncommented) uncommented)
+ (("^//(#define IMAGE_TRUST_CMD.*)" _ uncommented)
+ uncommented)
+ (("^#undef.*(DOWNLOAD_PROTO_HTTPS.*)" _ option)
+ (string-append "#define " option))
+ (("^#undef.*(DOWNLOAD_PROTO_NFS.*)" _ option)
+ (string-append "#define " option)))
+ #t))
+ (delete 'configure) ; no configure script
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (ipxe (string-append out "/lib/ipxe"))
+ (exts-re
+ "\\.(efi|efirom|iso|kkpxe|kpxe|lkrn|mrom|pxe|rom|usb)$")
+ (dirs '("bin" "bin-i386-linux" "bin-x86_64-pcbios"
+ "bin-x86_64-efi" "bin-x86_64-linux" "bin-i386-efi"))
+ (files (apply append
+ (map (lambda (dir)
+ (find-files dir exts-re)) dirs))))
+ (for-each (lambda (file)
+ (let* ((subdir (dirname file))
+ (fn (basename file))
+ (tgtsubdir (cond
+ ((string=? "bin" subdir) "")
+ ((string-prefix? "bin-" subdir)
+ (string-drop subdir 4)))))
+ (install-file file
+ (string-append ipxe "/" tgtsubdir))))
+ files))
+ #t))
+ (add-after 'install 'leave-source-directory
+ (lambda _ (chdir "..") #t)))
+ #:tests? #f)) ; no test suite
+ (native-inputs
+ `(("perl" ,perl)
+ ("syslinux" ,syslinux)
+ ("xorriso" ,xorriso)))
+ (home-page "https://ipxe.org")
+ (synopsis "PXE-compliant network boot firmware")
+ (description "iPXE is a network boot firmware. It provides a full PXE
+implementation enhanced with additional features such as booting from: a web
+server via HTTP, an iSCSI SAN, a Fibre Channel SAN via FCoE, an AoE SAN, a
+wireless network, a wide-area network, an Infiniband network. It allows to
+control the boot process with a script. You can use iPXE to replace the
+existing PXE ROM on your network card, or you can chainload into iPXE to obtain
+the features of iPXE without the hassle of reflashing.")
+ (license license:gpl2+))))
+
diff --git a/gnu/packages/busybox.scm b/gnu/packages/busybox.scm
index 7fc065f7ac..5af67e084d 100644
--- a/gnu/packages/busybox.scm
+++ b/gnu/packages/busybox.scm
@@ -1,7 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 John Darrington <jmd@gnu.org>
;;; Copyright © 2016, 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -33,7 +33,7 @@
(define-public busybox
(package
(name "busybox")
- (version "1.32.0")
+ (version "1.32.1")
(source (origin
(method url-fetch)
(uri (string-append
@@ -41,7 +41,7 @@
version ".tar.bz2"))
(sha256
(base32
- "12g63zsvzfz04wbyga8riyl8ils05riw4xf26cyiaasbs3qqfpf3"))))
+ "1vhd59qmrdyrr1q7rvxmyl96z192mxl089hi87yl0hcp6fyw8mwx"))))
(build-system gnu-build-system)
(arguments
'(#:phases
diff --git a/gnu/packages/check.scm b/gnu/packages/check.scm
index 1300f9e1a6..d9a1fb3acf 100644
--- a/gnu/packages/check.scm
+++ b/gnu/packages/check.scm
@@ -7,7 +7,7 @@
;;; Copyright © 2015, 2017 Cyril Roelandt <tipecaml@gmail.com>
;;; Copyright © 2015 Federico Beffa <beffa@fbengineering.ch>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
-;;; Copyright © 2015, 2016, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2015, 2016, 2018, 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016, 2017 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016 Christopher Allan Webber <cwebber@dustycloud.org>
;;; Copyright © 2016, 2017 Danny Milosavljevic <dannym+a@scratchpost.org>
@@ -288,6 +288,55 @@ unit testing. Test output is in XML for automatic testing and GUI based for
supervised tests.")
(license license:lgpl2.1))) ; no copyright notices. LGPL2.1 is in the tarball
+(define-public shunit2
+ (package
+ (name "shunit2")
+ (version "2.1.8")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/kward/shunit2")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "08vs0jjl3pfh100sjlw31x4638xj7fghr0j2g1zfikba8n1f9491"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (delete 'configure) ; no configure script
+ (delete 'build)
+ (add-after 'patch-source-shebangs 'patch-more-shebangs
+ (lambda _
+ (substitute* "shunit2"
+ (("#! /bin/sh") (string-append "#! " (which "sh")))
+ (("/usr/bin/od") (which "od")))
+ (substitute* "test_runner"
+ (("/bin/sh") (which "sh"))
+ (("/bin/bash") (which "bash")))
+ #t))
+ (replace 'check
+ (lambda* (#:key tests? #:allow-other-keys)
+ (when tests?
+ ;; This test is buggy in the build container.
+ (delete-file "shunit2_misc_test.sh")
+ (invoke "sh" "test_runner"))
+ #t))
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (install-file "shunit2"
+ (string-append (assoc-ref outputs "out")
+ "/bin"))
+ #t)))))
+ (home-page "https://github.com/kward/shunit2")
+ (synopsis "@code{xUnit} based unit testing for Unix shell scripts")
+ (description "@code{shUnit2} was originally developed to provide a
+consistent testing solution for @code{log4sh}, a shell based logging framework
+similar to @code{log4j}. It is designed to work in a similar manner to JUnit,
+PyUnit and others.")
+ (license license:asl2.0)))
+
;; When dependent packages upgraded to use newer version of catch, this one should
;; be removed.
(define-public catch-framework
diff --git a/gnu/packages/chromium.scm b/gnu/packages/chromium.scm
index 175b1a74ef..a994b387bb 100644
--- a/gnu/packages/chromium.scm
+++ b/gnu/packages/chromium.scm
@@ -302,8 +302,8 @@
(string-append "ungoogled-chromium-" category "-" name))))
(sha256 (base32 hash))))
-(define %chromium-version "87.0.4280.88")
-(define %ungoogled-revision "b78cb927fa8beaee0ddfb4385277edb96444c40f")
+(define %chromium-version "87.0.4280.141")
+(define %ungoogled-revision "483a1bae4eee601c7d0a4a63499380e40e4f8a44")
(define %debian-revision "debian/84.0.4147.105-1")
(define %debian-patches
@@ -321,7 +321,7 @@
(string-take %ungoogled-revision 7)))
(sha256
(base32
- "0w2137w8hfcgl6f938hqnb4ffp33v5r8vdzxrvs814w7dszkiqgg"))))
+ "0r09d27jrdz01rcwifchbq7ksh2bac15h8svq18jx426mr56dzla"))))
(define %guix-patches
(list (local-file
@@ -443,7 +443,7 @@
%chromium-version ".tar.xz"))
(sha256
(base32
- "1h09g9b2zxad85vd146ymvg3w2kpngpi78yig3dn1vrmhwr4aiiy"))
+ "0x9k809m36pfirnw2vnr9pk93nxdbgrvna0xf1rs3q91zkbr2x8l"))
(modules '((guix build utils)))
(snippet (force ungoogled-chromium-snippet))))
(build-system gnu-build-system)
diff --git a/gnu/packages/compression.scm b/gnu/packages/compression.scm
index 1eab34a517..56350089f5 100644
--- a/gnu/packages/compression.scm
+++ b/gnu/packages/compression.scm
@@ -1816,14 +1816,14 @@ Clzip is intended to be fully compatible with the regular lzip package.")
(define-public lzlib
(package
(name "lzlib")
- (version "1.11")
+ (version "1.12")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://savannah/lzip/lzlib/"
"lzlib-" version ".tar.gz"))
(sha256
- (base32 "0djdj4sg33rzi4k84cygvnp09bfsv6i8wy2k7i67rayib63myp3c"))))
+ (base32 "1c9pwd6by8is4z8bs6j306jyy6pgm2dvsn4fr7fg2b5m5qj88pcf"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
@@ -2075,13 +2075,13 @@ reading from and writing to ZIP archives. ")
(define-public zutils
(package
(name "zutils")
- (version "1.9")
+ (version "1.10")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://savannah/zutils/zutils-" version ".tar.lz"))
(sha256
- (base32 "0y2wm8wqr1wi1b1fv45dn50njv4q81p6ifx0279ji1bq56qkrn2r"))))
+ (base32 "15dimqp8zlqaaa2l46r22srp1py38mlmn69ph1j5fmrd54w43m0d"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
diff --git a/gnu/packages/cpp.scm b/gnu/packages/cpp.scm
index 45d3faeafb..ca8f7a9f80 100644
--- a/gnu/packages/cpp.scm
+++ b/gnu/packages/cpp.scm
@@ -808,3 +808,25 @@ code will be mixed in with the actual programming logic. This implementation
provides a number of utilities to make coding with expected cleaner.")
(home-page "https://tl.tartanllama.xyz/")
(license license:cc0)))
+
+(define-public magic-enum
+ (package
+ (name "magic-enum")
+ (version "0.7.2")
+ (home-page "https://github.com/Neargye/magic_enum")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url home-page)
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "07j5zdf3vkliwrcv6k663k35akn7qp23794sz2mnvkj9hbv9s8cx"))))
+ (build-system cmake-build-system)
+ (native-inputs
+ `(("gcc" ,gcc-9)))
+ (synopsis "C++17 header only library for compile time reflection of enums")
+ (description "Magic Enum offers static reflection of enums, with
+conversions to and from strings, iteration and related functionality.")
+ (license license:expat)))
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 40f8e82c34..874a77c552 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015, 2016 Pjotr Prins <pjotr.guix@thebird.nl>
;;; Copyright © 2016, 2017 Ben Woodcroft <donttrustben@gmail.com>
@@ -126,14 +126,14 @@ files and provide more explicit control over line endings.")
(define-public r-diffobj
(package
(name "r-diffobj")
- (version "0.3.2")
+ (version "0.3.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "diffobj" version))
(sha256
(base32
- "0v18zz14g8ppzmj1d997rdmsfh327ml4wvpmfx168lravdsk5ym2"))))
+ "1x3d5sk8mk0s2d7dq8wxi1zv6krlx33n22ls2jwnb58b8xrmakj1"))))
(properties `((upstream-name . "diffobj")))
(build-system r-build-system)
(propagated-inputs `(("r-crayon" ,r-crayon)))
@@ -178,14 +178,14 @@ easier.")
(define-public r-rticles
(package
(name "r-rticles")
- (version "0.17")
+ (version "0.18")
(source
(origin
(method url-fetch)
(uri (cran-uri "rticles" version))
(sha256
(base32
- "1wbwva5n88dw3vvhcrlzkr58cv03hyx0dqgfmxj7d0dgf4ichr3c"))))
+ "1srczjy9dqw06glrv95798xsg462kfbbwm3yk1fv1zhpz9jhakwv"))))
(properties `((upstream-name . "rticles")))
(build-system r-build-system)
(propagated-inputs
@@ -639,13 +639,13 @@ objects.")
(define-public r-mboost
(package
(name "r-mboost")
- (version "2.9-3")
+ (version "2.9-4")
(source (origin
(method url-fetch)
(uri (cran-uri "mboost" version))
(sha256
(base32
- "1qp5c43kc0939sss5w3hhn794lbi69wgfsa31sq4c8vzh35pjqmf"))))
+ "1dgyc38axfk2a430wsdnnk76xikizkyxf5r0l1kbp6cacrx6idz0"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lattice" ,r-lattice)
@@ -1024,19 +1024,17 @@ into a pipeline of data manipulation and visualisation.")
(define-public r-httpuv
(package
(name "r-httpuv")
- (version "1.5.4")
+ (version "1.5.5")
(source (origin
(method url-fetch)
(uri (cran-uri "httpuv" version))
(sha256
(base32
- "066rprqvz9qln6xd85x1yh1wbbmzd157xjl8zq1zbgr8l6347inm"))
+ "05rir03xwamwfq5691vx0x957sgmr4i8iv5vpx5rv1f74y4wkrhb"))
;; Unvendor bundled libraries. As of 1.5.4 the vendored libuv
;; only contains fixes for building on Solaris.
- (patches (search-patches "r-httpuv-1.5.4-unvendor-libuv.patch"))
- (modules '((guix build utils)
- (ice-9 ftw)
- (srfi srfi-1)))
+ (patches (search-patches "r-httpuv-1.5.5-unvendor-libuv.patch"))
+ (modules '((guix build utils)))
(snippet
`(begin
(delete-file-recursively "src/libuv")
@@ -1080,13 +1078,13 @@ particularly easy to create complete web applications using httpuv alone.")
(define-public r-jsonlite
(package
(name "r-jsonlite")
- (version "1.7.1")
+ (version "1.7.2")
(source (origin
(method url-fetch)
(uri (cran-uri "jsonlite" version))
(sha256
(base32
- "1wygpnycmyf339x92hwapqk7nc1gs9cadx890b809a9spjhah41a"))))
+ "1lhzcpz9clwq04i5m6jzkvw9x03pwlqrixv4l9xzchjr8d84nd86"))))
(build-system r-build-system)
(native-inputs
`(("r-knitr" ,r-knitr)))
@@ -1106,13 +1104,13 @@ in systems and applications.")
(define-public r-servr
(package
(name "r-servr")
- (version "0.20")
+ (version "0.21")
(source (origin
(method url-fetch)
(uri (cran-uri "servr" version))
(sha256
(base32
- "0px75vkc6q4iwbirr27bbrbpv0v9ial7zijnbd6dhjccwxl3x1l3"))))
+ "12fk585hmz735v4hra8da9wld1fmd67byqnf95m7jjyh7l3dmh1z"))))
(build-system r-build-system)
(propagated-inputs
`(("r-httpuv" ,r-httpuv)
@@ -1130,13 +1128,13 @@ directory.")
(define-public r-htmltools
(package
(name "r-htmltools")
- (version "0.5.0")
+ (version "0.5.1")
(source (origin
(method url-fetch)
(uri (cran-uri "htmltools" version))
(sha256
(base32
- "07fjznax5sin563ddnzlb7iwc8b39wzf7ymjn66pbmxgskijq2pz"))))
+ "01v33zcs9rv16r6v8ckqh92k5axj6skmk9hyakmqqmgra522xj3a"))))
(build-system r-build-system)
(propagated-inputs
`(("r-base64enc" ,r-base64enc)
@@ -1151,13 +1149,13 @@ directory.")
(define-public r-htmlwidgets
(package
(name "r-htmlwidgets")
- (version "1.5.2")
+ (version "1.5.3")
(source (origin
(method url-fetch)
(uri (cran-uri "htmlwidgets" version))
(sha256
(base32
- "0072wlkl58lav3qszzqw6pmx8qra4784r0yb6rx4lg7rbrik6335"))))
+ "0a8g7wqd3qxnhwkm9c9bkzg29db7gvjiaa5y038ln8nch8qq7981"))))
(build-system r-build-system)
(propagated-inputs
`(("r-htmltools" ,r-htmltools)
@@ -1728,14 +1726,14 @@ in R and Shiny via the D3 visualization library.")
(define-public r-crosstalk
(package
(name "r-crosstalk")
- (version "1.1.0.1")
+ (version "1.1.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "crosstalk" version))
(sha256
(base32
- "03ihj7cimkklrbad9zic78xsrfcisygmgy859hqnx0hiph80p9rn"))))
+ "1n6c6s7a6yxiwvva71x6bzcrim8xprl5s01fqiy61yq0y3vk8cpd"))))
(build-system r-build-system)
(propagated-inputs
`(("r-htmltools" ,r-htmltools)
@@ -2143,13 +2141,13 @@ initiative to bring PASSTEC 2000 functionalities to R.")
(define-public r-partykit
(package
(name "r-partykit")
- (version "1.2-10")
+ (version "1.2-11")
(source (origin
(method url-fetch)
(uri (cran-uri "partykit" version))
(sha256
(base32
- "1jg68rqhk2r0h2hk50xl99zp56b1nfdcam06kfvssqrkgkavkswf"))))
+ "00n6a74x257m2jk7jadjfxaclihxqpqwh356bgxmq8rag0nk70rs"))))
(build-system r-build-system)
(propagated-inputs
`(("r-formula" ,r-formula)
@@ -2241,13 +2239,13 @@ processes. Most of its code is based on the @code{psutil} Python package.")
(define-public r-pkgbuild
(package
(name "r-pkgbuild")
- (version "1.1.0")
+ (version "1.2.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "pkgbuild" version))
(sha256
- (base32 "1gdbrjq4kiwm45c6pb23mp327qyjvslhyf72ca4zhlzwc5vgp6xk"))))
+ (base32 "0qx920h2viwjg10va81nj0xja495d8ni6vcc25ggvzki6a6k069f"))))
(build-system r-build-system)
(propagated-inputs
`(("r-callr" ,r-callr)
@@ -2298,13 +2296,13 @@ you to rapidly iterate while developing a package.")
(define-public r-rcpp
(package
(name "r-rcpp")
- (version "1.0.5")
+ (version "1.0.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "Rcpp" version))
(sha256
- (base32 "012wbj446k1wz6bp6bpf6h77ypvcsw69xvnax6qf6vyc7dj2qimq"))))
+ (base32 "04ph6lm36cmvz01ng53pvvf3jxvzsn9smyflkfc7l3q0pib4gwn9"))))
(build-system r-build-system)
(home-page "http://www.rcpp.org")
(synopsis "Seamless R and C++ integration")
@@ -2473,14 +2471,14 @@ validation and filtering on the values, making options invisible or private.")
(define-public r-circlize
(package
(name "r-circlize")
- (version "0.4.11")
+ (version "0.4.12")
(source
(origin
(method url-fetch)
(uri (cran-uri "circlize" version))
(sha256
(base32
- "1s84xl7kv3qc1261xxaq4aqh64gwywhacsf5nh6yf8djw0d1w42d"))))
+ "1x2j6a80bb4fly3dm91ias964s1gb1cmzj3lyh69ikwjaam0rdmk"))))
(build-system r-build-system)
(propagated-inputs
`(("r-colorspace" ,r-colorspace)
@@ -2581,14 +2579,14 @@ compare different dendrograms to one another.")
(define-public r-getoptlong
(package
(name "r-getoptlong")
- (version "1.0.4")
+ (version "1.0.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "GetoptLong" version))
(sha256
(base32
- "0l9pa9dx8pcg3j7jn4b9k98g7r5vdsvnmf6apnifzm57mc0vlkg6"))))
+ "00fpm6nd3kqa2ikasxa62jzywi46fvvmx1mdavcp5yrxxn37j8wc"))))
(properties `((upstream-name . "GetoptLong")))
(build-system r-build-system)
(inputs
@@ -2718,13 +2716,13 @@ quantities.")
(define-public r-restrserve
(package
(name "r-restrserve")
- (version "0.4.0")
+ (version "0.4.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "RestRserve" version))
(sha256
- (base32 "07mm65yxzpwlg6x3lsggj41v8nl4m6v9mszhqjpgj19v3yxvwgi0"))))
+ (base32 "1486hrzj5q5w4nbrsbqlv7vv20ly01y90qc2vygl5syzwvyjd422"))))
(build-system r-build-system)
(propagated-inputs
`(("r-checkmate" ,r-checkmate)
@@ -2774,20 +2772,22 @@ package also provides a C++ API, that works with or without Rcpp.")
(define-public r-ggally
(package
(name "r-ggally")
- (version "2.0.0")
+ (version "2.1.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "GGally" version))
(sha256
(base32
- "1gkmpzh1yvwvypkw0nwqv3gsf6za3220wig3rfv8g23kss60rl1s"))))
+ "0lvcvlc8p2cii7rqx7m81f7cv3kk9mlf7cbbgv7l75g7ljw8dyvz"))))
(properties `((upstream-name . "GGally")))
(build-system r-build-system)
(inputs
- `(("libressl" ,libressl)))
+ `(("openssl" ,openssl)))
(propagated-inputs
- `(("r-ggplot2" ,r-ggplot2)
+ `(("r-dplyr" ,r-dplyr)
+ ("r-forcats" ,r-forcats)
+ ("r-ggplot2" ,r-ggplot2)
("r-gtable" ,r-gtable)
("r-lifecycle" ,r-lifecycle)
("r-plyr" ,r-plyr)
@@ -2795,7 +2795,8 @@ package also provides a C++ API, that works with or without Rcpp.")
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-reshape" ,r-reshape)
("r-rlang" ,r-rlang)
- ("r-scales" ,r-scales)))
+ ("r-scales" ,r-scales)
+ ("r-tidyr" ,r-tidyr)))
(home-page "https://ggobi.github.io/ggally")
(synopsis "Extension to ggplot2")
(description
@@ -2830,13 +2831,13 @@ most popular ones.")
(define-public r-sp
(package
(name "r-sp")
- (version "1.4-4")
+ (version "1.4-5")
(source
(origin
(method url-fetch)
(uri (cran-uri "sp" version))
(sha256
- (base32 "0zzw1gfic5b311vrbkmmmaap3yllgd192af067l5ymm885jqm1zs"))))
+ (base32 "1nh9izsnszzm5kbq461w8bi0yh7fqzb74b2zmpg5qis0slbb5vkb"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lattice" ,r-lattice)))
@@ -3387,14 +3388,14 @@ contexts.")
(define-public r-squarem
(package
(name "r-squarem")
- (version "2020.5")
+ (version "2021.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "SQUAREM" version))
(sha256
(base32
- "1f0j5pbsz2wi7dfl8h8gvdl991bjywiwkd2f6z0xgkh87kl5y0b4"))))
+ "0n1s32l9p4vdm3h5q6g43s0qbpzry08difsh0yay80wrla6f3rb6"))))
(properties `((upstream-name . "SQUAREM")))
(build-system r-build-system)
(home-page "https://coah.jhu.edu/people/Faculty_personal_Pages/Varadhan.html")
@@ -3552,14 +3553,14 @@ dimensioned arrays.")
(define-public r-rmysql
(package
(name "r-rmysql")
- (version "0.10.20")
+ (version "0.10.21")
(source
(origin
(method url-fetch)
(uri (cran-uri "RMySQL" version))
(sha256
(base32
- "0lv9m6zpm8dgv7yixr6xhw379vbq45d7n7gkrmjrppdj8vcih77i"))))
+ "0cbb5ln9iigl816nzvsls9zil5qlfr8yv2aginapqv6n69nz0srs"))))
(properties `((upstream-name . "RMySQL")))
(build-system r-build-system)
(inputs
@@ -3765,14 +3766,14 @@ problems as well as resampling based estimators of prediction error.")
(define-public r-psych
(package
(name "r-psych")
- (version "2.0.9")
+ (version "2.0.12")
(source
(origin
(method url-fetch)
(uri (cran-uri "psych" version))
(sha256
(base32
- "0wdh580a0psbdil28n0d85hnp42wmn11hcbnihjq8r7h54drgzpn"))))
+ "0k5dw5nb7kx7f21b0z01dry99qcpnk7iaicv7xq9d35wv2hx8wca"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lattice" ,r-lattice)
@@ -3818,14 +3819,14 @@ by base R methods related to model fitting.")
(define-public r-broom
(package
(name "r-broom")
- (version "0.7.2")
+ (version "0.7.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "broom" version))
(sha256
(base32
- "18qkgw5f46cfr8sc7r9a261ivn3s4w88sdj653gaa20723179300"))))
+ "0bxwmqj37m06ci378xqlf7kar7pg5g903i1vnrv4i256dkj50mny"))))
(build-system r-build-system)
(propagated-inputs
`(("r-backports" ,r-backports)
@@ -3922,18 +3923,19 @@ for certain use cases.")
(define-public r-ggrepel
(package
(name "r-ggrepel")
- (version "0.8.2")
+ (version "0.9.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggrepel" version))
(sha256
(base32
- "1qaifn3dazdqbqlii210xhw7yf142iw7g9p2axmmxbz90p0by08d"))))
+ "1z5xyr5f4aryy0v1gzz9m8m4s5fzzwbrf0fxll1nbflr8xnr3yr9"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
("r-rcpp" ,r-rcpp)
+ ("r-rlang" ,r-rlang)
("r-scales" ,r-scales)))
(native-inputs
`(("r-knitr" ,r-knitr))) ; for vignettes
@@ -4228,14 +4230,14 @@ programming} (SQP) based solver).")
(define-public r-hardyweinberg
(package
(name "r-hardyweinberg")
- (version "1.6.9")
+ (version "1.7.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "HardyWeinberg" version))
(sha256
(base32
- "0l93r1hkr483hp4yd7rm7mdkgl5lp0nkvv0inahj3r1cplgfxpvs"))))
+ "0afjz818yvaq3akvgpy4irnlpspd2dj71qkrwj81lm9y36ypwlw6"))))
(properties `((upstream-name . "HardyWeinberg")))
(build-system r-build-system)
(propagated-inputs
@@ -4539,20 +4541,22 @@ plotting. a three dimensional point cloud.")
(define-public r-ggridges
(package
(name "r-ggridges")
- (version "0.5.2")
+ (version "0.5.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggridges" version))
(sha256
(base32
- "03pz257aw0mkh5k75rby9givkc1ky3n5scvhjhjiz9vry9fpffmh"))))
+ "0bmlqy1p6rac90af97ffpdi6php7dblx66l2hcm8ljidgyqzmspm"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
("r-plyr" ,r-plyr)
("r-scales" ,r-scales)
("r-withr" ,r-withr)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/clauswilke/ggridges")
(synopsis "Ridgeline plots in ggplot2")
(description
@@ -4798,13 +4802,13 @@ iVAT).")
(define-public r-xfun
(package
(name "r-xfun")
- (version "0.19")
+ (version "0.20")
(source
(origin
(method url-fetch)
(uri (cran-uri "xfun" version))
(sha256
- (base32 "15yyigkl1g9w9d7097hrm94dxn1af333ywr5xdw78qqrw6npn0iv"))))
+ (base32 "043wv9qihs3r29810mf8ajpn2iks1bxq44wbxz8sfpix5b8kjhi8"))))
(build-system r-build-system)
;; knitr itself depends on xfun
#;
@@ -4861,14 +4865,14 @@ to variables on the left-hand side of the assignment.")
(define-public r-vctrs
(package
(name "r-vctrs")
- (version "0.3.5")
+ (version "0.3.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "vctrs" version))
(sha256
(base32
- "1k1mcq7jkpc55dsm0wb4k8asc1irvmi5884v3ap4sabf22c5sq0i"))))
+ "09ddxgzyah7lw42hn6n8fynsixf43s10jamsf94d2aidky63czfz"))))
(build-system r-build-system)
(propagated-inputs
`(("r-digest" ,r-digest)
@@ -4948,14 +4952,14 @@ terminals.")
(define-public r-tinytex
(package
(name "r-tinytex")
- (version "0.27")
+ (version "0.28")
(source
(origin
(method url-fetch)
(uri (cran-uri "tinytex" version))
(sha256
(base32
- "10hbc9h1fsw91w5f4fjcaqy68b3n1wr6pml01fnkf3pdjiri5sj0"))))
+ "11pa1q7gl17ala74lz10qbghk2yqanl9pylwvi9b4kmhx856b83n"))))
(build-system r-build-system)
(propagated-inputs
`(("r-xfun" ,r-xfun)))
@@ -5496,14 +5500,14 @@ sample Robust Rank-Order Distributional Test.")
(define-public r-expm
(package
(name "r-expm")
- (version "0.999-5")
+ (version "0.999-6")
(source
(origin
(method url-fetch)
(uri (cran-uri "expm" version))
(sha256
(base32
- "0y98ya8rhy891nysjlzzy7kcm13dsz8gvxwzvbkmcp1xx0vicxc7"))))
+ "1p5dapwv8ycxaysgi6imnby04i4kh1c5a2czqa4wygz0s8pr2y9c"))))
(build-system r-build-system)
(propagated-inputs `(("r-matrix" ,r-matrix)))
(native-inputs `(("gfortran" ,gfortran)))
@@ -6042,14 +6046,14 @@ specific S3-method.")
(define-public r-vim
(package
(name "r-vim")
- (version "6.0.0")
+ (version "6.1.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "VIM" version))
(sha256
(base32
- "0ddhca4v912q82rjpf1qld6i6g2c381g0v5b4hbnygr3lm6a7wiv"))))
+ "1a8aw0ysaf0al95m2la2zx1p3g5mnwqx0x30br1s1dqqkfnv57hz"))))
(properties `((upstream-name . "VIM")))
(build-system r-build-system)
(propagated-inputs
@@ -6530,14 +6534,14 @@ Python's @url{https://github.com/ActiveState/appdirs,Appdirs} to R.")
(define-public r-renv
(package
(name "r-renv")
- (version "0.12.3")
+ (version "0.12.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "renv" version))
(sha256
(base32
- "0k31x19gzpffb701c76p840cip10c0dh8yv3wcs30gqi0ag1g77l"))))
+ "0wfq1z5glng6jrfxj25mjhp129z6468gaszr9ggks5gp8lrwszzh"))))
(properties `((upstream-name . "renv")))
(build-system r-build-system)
(native-inputs
@@ -6867,19 +6871,20 @@ clustering.")
(define-public r-factominer
(package
(name "r-factominer")
- (version "2.3")
+ (version "2.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "FactoMineR" version))
(sha256
(base32
- "0ldgf3daksh6lpblhqys67m4mxqx3q9s9n5plfam6dwshfik0ky6"))))
+ "0lg8n9fxxk46nchnj4pbpqqf4swxfsq7r9jzr36dmd36kb7avqxr"))))
(properties `((upstream-name . "FactoMineR")))
(build-system r-build-system)
(propagated-inputs
`(("r-car" ,r-car)
("r-cluster" ,r-cluster)
+ ("r-dt" ,r-dt)
("r-ellipse" ,r-ellipse)
("r-flashclust" ,r-flashclust)
("r-ggplot2" ,r-ggplot2)
@@ -6888,6 +6893,8 @@ clustering.")
("r-leaps" ,r-leaps)
("r-mass" ,r-mass)
("r-scatterplot3d" ,r-scatterplot3d)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "http://factominer.free.fr")
(synopsis "Multivariate exploratory data analysis and data mining")
(description
@@ -6938,14 +6945,14 @@ steps and provides ggplot2-based elegant data visualization.")
(define-public r-fansi
(package
(name "r-fansi")
- (version "0.4.1")
+ (version "0.4.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "fansi" version))
(sha256
(base32
- "028ywjy538psnmdnddvy5jr3idzffr4hikzr4x97x0m30g4fws9w"))))
+ "0i7wmaflkjzdbggqv31wnsj3m9imvc6db429vyjk64xrz1ng1vd2"))))
(build-system r-build-system)
(native-inputs
`(("r-knitr" ,r-knitr))) ; for vignettes
@@ -7147,18 +7154,17 @@ references and Rd files.")
(define-public r-officer
(package
(name "r-officer")
- (version "0.3.15")
+ (version "0.3.16")
(source
(origin
(method url-fetch)
(uri (cran-uri "officer" version))
(sha256
(base32
- "1s9hrkdx105c1plpxywv68bmp8hvvxbdizhwx81fxr79fhj62x5j"))))
+ "1ls5kp70jfxrzxxb3xrg8sn2fyk6qd7rmx23n5jxi7z7850avjrj"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-magrittr" ,r-magrittr)
- ("r-r6" ,r-r6)
+ `(("r-r6" ,r-r6)
("r-uuid" ,r-uuid)
("r-xml2" ,r-xml2)
("r-zip" ,r-zip)))
@@ -7180,14 +7186,14 @@ to help insert or delete content at a specific location in the document.")
(define-public r-profilemodel
(package
(name "r-profilemodel")
- (version "0.6.0")
+ (version "0.6.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "profileModel" version))
(sha256
(base32
- "0yq8hy43h62hlz8bbf9ila4a3xcwizi1if27b78xc5y857ncwad8"))))
+ "01m5nb8cmq0aq555pxk2a99182si65hhmn68yn9nal2j3zl2bp4i"))))
(properties `((upstream-name . "profileModel")))
(build-system r-build-system)
(home-page "https://github.com/ikosmidis/profileModel")
@@ -7409,14 +7415,14 @@ other add-on packages.")
(define-public r-insight
(package
(name "r-insight")
- (version "0.11.1")
+ (version "0.12.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "insight" version))
(sha256
(base32
- "1m95xfvai1kbzqxdggjvdbk6ax2dg4v2lrfpqn7v607g2n77n2k0"))))
+ "0gkvcw9d729ql1gfrpxzgrag4xafd0hchrdww215qz11ma1rzy7s"))))
(build-system r-build-system)
(native-inputs
`(("r-knitr" ,r-knitr)))
@@ -7463,14 +7469,14 @@ vice versa), or to deal with multiple declared missing values.")
(define-public r-sjmisc
(package
(name "r-sjmisc")
- (version "2.8.5")
+ (version "2.8.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "sjmisc" version))
(sha256
(base32
- "0xl0s56d13bia89ai619rcr0fzbvc2k8f7hjxik4qp0g4v87zzlk"))))
+ "1nfrkv5jfnwb85blpv7yk7xac1myzi2c30bqcf7xicniknkjwycr"))))
(build-system r-build-system)
(propagated-inputs
`(("r-dplyr" ,r-dplyr)
@@ -7514,23 +7520,25 @@ hypothesis of normality.")
(define-public r-moonbook
(package
(name "r-moonbook")
- (version "0.2.3")
+ (version "0.2.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "moonBook" version))
(sha256
(base32
- "0hys56mwbm776ff7dibi8wzyf69qiais9rs1jazv79lk6h56s9s6"))))
+ "0z78pzc8sr2g19xjdd9cmai4iqyifmh79gj8x40ddww6a27dalry"))))
(properties `((upstream-name . "moonBook")))
(build-system r-build-system)
(propagated-inputs
`(("r-magrittr" ,r-magrittr)
("r-nortest" ,r-nortest)
- ("r-purrr" ,r-purrr)
("r-sjmisc" ,r-sjmisc)
("r-stringr" ,r-stringr)
- ("r-survival" ,r-survival)))
+ ("r-survival" ,r-survival)
+ ("r-ztable" ,r-ztable)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/cardiomoon/moonBook")
(synopsis "Functions and datasets for the book by Keon-Woong Moon")
(description
@@ -7769,14 +7777,14 @@ Group (Non-)Overlap considerations.")
(define-public r-deriv
(package
(name "r-deriv")
- (version "4.1.1")
+ (version "4.1.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "Deriv" version))
(sha256
(base32
- "1fzchsignpb7cpizbf6l8v9k1nkmaf4r4j3mnxz0csl2g2npi1xc"))))
+ "1j9sh1w9lsnnhlh59g4ghykyfx46rxh380s8imvm7pzna7rw7c64"))))
(properties `((upstream-name . "Deriv")))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/Deriv")
@@ -7901,14 +7909,14 @@ containing one or more SNPs that evolved under directional selection.")
(define-public r-proc
(package
(name "r-proc")
- (version "1.16.2")
+ (version "1.17.0.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "pROC" version))
(sha256
(base32
- "0apwa5zzqh74pjnvf5a1s5qf6i9r5h44jdllfrwymkd2v479d2xn"))))
+ "1gd6a47d6bcfd237s3g7r9rws8x2sg7zrvq5k6clpc41zdpp4712"))))
(properties `((upstream-name . "pROC")))
(build-system r-build-system)
(propagated-inputs
@@ -8176,13 +8184,13 @@ and coverage methods to tune the choice of threshold.")
(define-public r-ggstance
(package
(name "r-ggstance")
- (version "0.3.4")
+ (version "0.3.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggstance" version))
(sha256
- (base32 "0aqz3dn02cgij018a4sglqwrwr9dzzj12l8xr1064q7hfd4f64m1"))))
+ (base32 "0jz9vvnmcc6a38n8nzr458r65sna23bgn5r8mxdhzdlyqibihr7d"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
@@ -8202,13 +8210,13 @@ and coverage methods to tune the choice of threshold.")
(define-public r-mosaiccore
(package
(name "r-mosaiccore")
- (version "0.8.0")
+ (version "0.9.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "mosaicCore" version))
(sha256
- (base32 "00va6x1i8d3wkm1bgsms9dsjfn5a1l43prpl9pqirgq3zm85hrqj"))))
+ (base32 "1h3ixzna4xy42rdnd89jj0v9q0riy3fnkd33z6l5c0zaidzm58fz"))))
(properties `((upstream-name . "mosaicCore")))
(build-system r-build-system)
(propagated-inputs
@@ -8222,26 +8230,62 @@ and coverage methods to tune the choice of threshold.")
"Common utilities used in other Mosaic family packages are collected here.")
(license license:gpl2+)))
+(define-public r-labelled
+ (package
+ (name "r-labelled")
+ (version "2.7.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "labelled" version))
+ (sha256
+ (base32
+ "1nsb0mh0jg7gggc41b6v55nmfq07g0qn9fy55x4jws5dscs6pdmi"))))
+ (properties `((upstream-name . "labelled")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-dplyr" ,r-dplyr)
+ ("r-haven" ,r-haven)
+ ("r-lifecycle" ,r-lifecycle)
+ ("r-pillar" ,r-pillar)
+ ("r-rlang" ,r-rlang)
+ ("r-tidyr" ,r-tidyr)
+ ("r-vctrs" ,r-vctrs)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "http://larmarange.github.io/labelled/")
+ (synopsis "Manipulating labelled data")
+ (description
+ "This package provides useful functions to deal with the
+@code{haven_labelled} and @code{haven_labelled_spss} classes introduced by the
+haven package. ")
+ (license license:gpl3)))
+
(define-public r-ggformula
(package
(name "r-ggformula")
- (version "0.9.4")
+ (version "0.10.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggformula" version))
(sha256
- (base32 "04vdhg1bbc1psrx9ggaphz7cx4fw5xsmhkqpqfcg2w4ba2bjy46f"))))
+ (base32 "1ph5jd8svk8hmshi894vmmpq3zwgdmf4yn3gmdlkad68z8jynhsp"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggforce" ,r-ggforce)
("r-ggplot2" ,r-ggplot2)
+ ("r-ggridges" ,r-ggridges)
("r-ggstance" ,r-ggstance)
+ ("r-labelled" ,r-labelled)
("r-magrittr" ,r-magrittr)
("r-mosaiccore" ,r-mosaiccore)
("r-rlang" ,r-rlang)
+ ("r-scales" ,r-scales)
("r-stringr" ,r-stringr)
("r-tibble" ,r-tibble)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/ProjectMOSAIC/ggformula/")
(synopsis "Formula interface for the @code{r-ggplot2}")
(description
@@ -8254,13 +8298,13 @@ while providing the intuitive capabilities of @code{r-ggplot2}.")
(define-public r-mosaicdata
(package
(name "r-mosaicdata")
- (version "0.20.1")
+ (version "0.20.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "mosaicData" version))
(sha256
- (base32 "05mrwvs7awhpv2gvk0jjva74gndfgh2cl17slxcjhwlpga8nmxji"))))
+ (base32 "0h3f5fgzkzjfgf3ml0qa5j52921y6wy6jgggxmhs31bs8fd4srg4"))))
(properties `((upstream-name . "mosaicData")))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/mosaicData/")
@@ -8868,14 +8912,14 @@ samples is large and the number of mixture components is not too large.")
(define-public r-magick
(package
(name "r-magick")
- (version "2.5.2")
+ (version "2.6.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "magick" version))
(sha256
(base32
- "0myvryya7b4bbw0hs4jqflrbdffmg78kz28gbybw3yc7zwc7sqxx"))))
+ "1k4fqhxh2ppynl56fs044wpn4wk6gbv6lwp2x4x7j67zwcv56n36"))))
(build-system r-build-system)
(inputs
`(("imagemagick" ,imagemagick)
@@ -9310,14 +9354,14 @@ Hothorn, Westfall, 2010, CRC Press).")
(define-public r-emmeans
(package
(name "r-emmeans")
- (version "1.5.2-1")
+ (version "1.5.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "emmeans" version))
(sha256
(base32
- "0ndbjhglycdycppz9lbj3vhiqv2mp0z6h4w8fbyjziqx15ai5h59"))))
+ "11x7bn260v91gb7qri1pq54l339zm4msa5frc8saqb9ykbg4dby5"))))
(build-system r-build-system)
(propagated-inputs
`(("r-estimability" ,r-estimability)
@@ -9361,13 +9405,13 @@ Cohen (1988).")
(define-public r-libcoin
(package
(name "r-libcoin")
- (version "1.0-6")
+ (version "1.0-7")
(source
(origin
(method url-fetch)
(uri (cran-uri "libcoin" version))
(sha256
- (base32 "0njfdbz4mkyasxm80p0fb0qibvzz7kdzddn8ybj2k6y8bx0w3bs8"))))
+ (base32 "1vb21pw3vpv2pdnfcddw2bax13v0dg656r28j0p8njcyhwk89xln"))))
(build-system r-build-system)
(propagated-inputs `(("r-mvtnorm" ,r-mvtnorm)))
(home-page "https://cran.r-project.org/web/packages/libcoin")
@@ -9380,14 +9424,14 @@ and permutation inference in the framework of Strasser and Weber (1999).")
(define-public r-coin
(package
(name "r-coin")
- (version "1.3-1")
+ (version "1.4-0")
(source
(origin
(method url-fetch)
(uri (cran-uri "coin" version))
(sha256
(base32
- "0qi03fyqw42a2vnqcia5l2m1mzyarj2q1iblknx9n19bdsd53qjx"))))
+ "1n2ad4m3zw8px6yc0h750k59pci3fqpnr742hhvsqirrwcdzp6zv"))))
(build-system r-build-system)
(propagated-inputs
`(("r-libcoin" ,r-libcoin)
@@ -9407,14 +9451,14 @@ correlation, censored, ordered and multivariate problems.")
(define-public r-bayesplot
(package
(name "r-bayesplot")
- (version "1.7.2")
+ (version "1.8.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "bayesplot" version))
(sha256
(base32
- "0aqy4bfjq1fmds0vpacsmqih528cp8wk4v4w0balzkph6zqzpwcl"))))
+ "0j69a78l5z0wyxcz607amaa4jc8kwwvcia9wxyir65b8ks9gj1d6"))))
(build-system r-build-system)
(inputs
`(("pandoc" ,pandoc)
@@ -9471,13 +9515,13 @@ detection, parallelism through BLAS and parallel user templates.")
(define-public r-sjstats
(package
(name "r-sjstats")
- (version "0.18.0")
+ (version "0.18.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "sjstats" version))
(sha256
- (base32 "17b1fcrhgjw66qa8zk2jj1bvz3vp5bnjn3p4y1wsg5ng5nxq8jz0"))))
+ (base32 "1cv80yjnyh6qihxf57zivihhia20gibr5f03x8aspy6382wnwlka"))))
(build-system r-build-system)
(propagated-inputs
`(("r-bayestestr" ,r-bayestestr)
@@ -9573,14 +9617,14 @@ ROPE percentage and pd).")
(define-public r-performance
(package
(name "r-performance")
- (version "0.6.0")
+ (version "0.6.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "performance" version))
(sha256
(base32
- "0ai1pp6k0pmmjgpj7hc53s0h258c4mljln8lv3nd9r7kzrmic0gc"))))
+ "0wz2zc98r99pg6r4l09qxxzv1fwxwp1md6wmhay401568kd8h5zn"))))
(build-system r-build-system)
(propagated-inputs
`(("r-bayestestr" ,r-bayestestr)
@@ -9600,14 +9644,14 @@ effects models and Bayesian models.")
(define-public r-ggeffects
(package
(name "r-ggeffects")
- (version "1.0.0")
+ (version "1.0.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggeffects" version))
(sha256
(base32
- "18diwssc5vij5g7zh9mv0ppcv3xgfi2jqzfx9srxfahg05sr1xdq"))))
+ "1c5rvycaqp7zp1j6j17c84v8nlpi0w7bhfxmcha4n37m0snk1kgy"))))
(build-system r-build-system)
(propagated-inputs
`(("r-insight" ,r-insight)
@@ -9630,14 +9674,14 @@ results using @code{ggplot2}.")
(define-public r-effectsize
(package
(name "r-effectsize")
- (version "0.4.1")
+ (version "0.4.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "effectsize" version))
(sha256
(base32
- "1rbl63b1c7z9llznnwvclqrcgdd4hfmc7y66v7raqqf2a4nadqa5"))))
+ "1hcrnax9wf0nwsb8nv15rxw8yy8w5dak16dw3w5bxi8xnf56lkz2"))))
(properties `((upstream-name . "effectsize")))
(build-system r-build-system)
(propagated-inputs
@@ -9657,13 +9701,13 @@ conversion of indices such as Cohen's d, r, odds, etc.")
(define-public r-sjplot
(package
(name "r-sjplot")
- (version "2.8.6")
+ (version "2.8.7")
(source
(origin
(method url-fetch)
(uri (cran-uri "sjPlot" version))
(sha256
- (base32 "1dn9nvvp4jd45kwr4rpp2abf7xdpdmiv41rr3fkdb32a136bzx4b"))))
+ (base32 "1g4qabg654kwdm09ihp4h3mg64a1d7a7gsn6w56rwsidqqaxilq0"))))
(properties `((upstream-name . "sjPlot")))
(build-system r-build-system)
(propagated-inputs
@@ -9811,17 +9855,96 @@ when building command line applications. They fall back to alternatives on
terminals that do not support Unicode.")
(license license:expat)))
+(define-public r-credentials
+ (package
+ (name "r-credentials")
+ (version "1.3.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "credentials" version))
+ (sha256
+ (base32
+ "1w9zj34xdwz9bszsvhv2cbgq96y5sgxbh7ndn31pgfcpzlkfq6f1"))))
+ (properties `((upstream-name . "credentials")))
+ (build-system r-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'setenv-HOME
+ (lambda _
+ ;; This is necessary because git looks for $HOME/.gitconfig
+ (setenv "HOME" "/tmp")
+ #t)))))
+ (inputs
+ `(("git" ,git-minimal)))
+ (propagated-inputs
+ `(("r-askpass" ,r-askpass)
+ ("r-curl" ,r-curl)
+ ("r-jsonlite" ,r-jsonlite)
+ ("r-openssl" ,r-openssl)
+ ("r-sys" ,r-sys)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
+ (home-page "https://docs.ropensci.org/credentials/")
+ (synopsis "Tools for managing SSH and Git credentials")
+ (description
+ "This package assists you in setting up and retrieving of HTTPS and SSH
+credentials for use with git and other services. For HTTPS remotes the
+package interfaces the @command{git-credential} utility which @command{git}
+uses to store HTTP usernames and passwords. For SSH remotes this package
+provides convenient functions to find or generate appropriate SSH keys. The
+package both helps the user to setup a local git installation, and also
+provides a back-end for git/ssh client libraries to authenticate with existing
+user credentials.")
+ (license license:expat)))
+
+(define-public r-gert
+ (package
+ (name "r-gert")
+ (version "1.0.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "gert" version))
+ (sha256
+ (base32
+ "1lq4hgv2727lwcv8vha5af26nslj99rjxjrgflshmmcihawpls1n"))))
+ (properties `((upstream-name . "gert")))
+ (build-system r-build-system)
+ (inputs
+ `(("libgit2" ,libgit2)
+ ("zlib" ,zlib)))
+ (propagated-inputs
+ `(("r-askpass" ,r-askpass)
+ ("r-credentials" ,r-credentials)
+ ("r-openssl" ,r-openssl)
+ ("r-rstudioapi" ,r-rstudioapi)
+ ("r-zip" ,r-zip)))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)
+ ("r-knitr" ,r-knitr)))
+ (home-page "https://docs.ropensci.org/gert/")
+ (synopsis "Simple Git client for R")
+ (description
+ "This package provides a simple git client for R based on libgit2 with
+support for SSH and HTTPS remotes. All functions in gert use basic R data
+types (such as vectors and data-frames) for their arguments and return values.
+User credentials are shared with command line git through the
+@code{git-credential} store and SSH keys stored on disk or ssh-agent.")
+ (license license:expat)))
+
(define-public r-usethis
(package
(name "r-usethis")
- (version "1.6.3")
+ (version "2.0.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "usethis" version))
(sha256
(base32
- "09lk04kycvf5x9ggrb6pwc7bx5mzqxwialm2w9vn1a0w0gh2gcfc"))))
+ "0m4qnnkdiizsdvq33x502zwkn98hw2qcfm45cjj031vaydcjpai2"))))
(build-system r-build-system)
(propagated-inputs
`(("r-cli" ,r-cli)
@@ -9830,11 +9953,13 @@ terminals that do not support Unicode.")
("r-curl" ,r-curl)
("r-desc" ,r-desc)
("r-fs" ,r-fs)
+ ("r-gert" ,r-gert)
("r-gh" ,r-gh)
- ("r-git2r" ,r-git2r)
("r-glue" ,r-glue)
+ ("r-jsonlite" ,r-jsonlite)
+ ("r-lifecycle" ,r-lifecycle)
("r-purrr" ,r-purrr)
- ("r-rematch2" ,r-rematch2)
+ ("r-rappdirs" ,r-rappdirs)
("r-rlang" ,r-rlang)
("r-rprojroot" ,r-rprojroot)
("r-rstudioapi" ,r-rstudioapi)
@@ -10002,14 +10127,14 @@ ways.")
(define-public r-summarytools
(package
(name "r-summarytools")
- (version "0.9.6")
+ (version "0.9.8")
(source
(origin
(method url-fetch)
(uri (cran-uri "summarytools" version))
(sha256
(base32
- "03pcb2ild1rb9f15yq8b68p9bg10z5wk2x7ahgyzkwdh5f81vbq2"))))
+ "0n7rad6bkfn9cb99wbfzbwl5qzch48r0gafhddfcqvyh4fbn2k0j"))))
(build-system r-build-system)
(propagated-inputs
`(("r-base64enc" ,r-base64enc)
@@ -10024,6 +10149,8 @@ ways.")
("r-rapportools" ,r-rapportools)
("r-tibble" ,r-tibble)
("r-tidyr" ,r-tidyr)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/dcomtois/summarytools")
(synopsis "Tools to quickly and neatly summarize data")
(description
@@ -10152,14 +10279,14 @@ the interfaces between R and C++.")
(define-public r-mvabund
(package
(name "r-mvabund")
- (version "4.1.3")
+ (version "4.1.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "mvabund" version))
(sha256
(base32
- "1z58h4dk3mc2hfnfvc7pghk471cbp7ah2s1z2ria5igw4s80962b"))))
+ "0aisvax9d7bk6aykrcdcn1ji618r520mcrkr1i3jnck1qs31z41f"))))
(build-system r-build-system)
(propagated-inputs
`(("r-mass" ,r-mass)
@@ -10177,14 +10304,14 @@ analysing multivariate abundance data in community ecology.")
(define-public r-afex
(package
(name "r-afex")
- (version "0.28-0")
+ (version "0.28-1")
(source
(origin
(method url-fetch)
(uri (cran-uri "afex" version))
(sha256
(base32
- "0c47bq2llzw2b4avhkxyhmf1m2zjh9jsjiw2kww9n1bhwqsyr4ci"))))
+ "0blwqr5ni3psav1dcdmhfi4jy3b4scm5njimqfpr1d81zadvgc6g"))))
(build-system r-build-system)
(propagated-inputs
`(("r-car" ,r-car)
@@ -10294,14 +10421,14 @@ address a bug.")
(define-public r-rcppannoy
(package
(name "r-rcppannoy")
- (version "0.0.17")
+ (version "0.0.18")
(source
(origin
(method url-fetch)
(uri (cran-uri "RcppAnnoy" version))
(sha256
(base32
- "0z4dpvk2hmh817709l70jdl1vvnzn0vb9wlr5m8jza24sn9w14ac"))))
+ "0n68cf77gz34iq6w6ad87pbqwqam45nxp1gjzns4g6qhf7qdvrz4"))))
(properties `((upstream-name . "RcppAnnoy")))
(build-system r-build-system)
(propagated-inputs
@@ -10410,17 +10537,18 @@ Bioconductor packages.")
(define-public r-rgl
(package
(name "r-rgl")
- (version "0.100.54")
+ (version "0.104.16")
(source
(origin
(method url-fetch)
(uri (cran-uri "rgl" version))
(sha256
(base32
- "1mgs2d8igmcdzzymfwbqdrypmaidd4pra5n5gnhsn9pm6pqzidqp"))))
+ "169a8riiam8445nl7rcwn0x92dlwyzh5xldvap6dcxjyjqmjwbdq"))))
(build-system r-build-system)
(native-inputs
- `(("pkg-config" ,pkg-config)))
+ `(("pkg-config" ,pkg-config)
+ ("r-knitr" ,r-knitr)))
(inputs
`(("freetype" ,freetype)
("libpng" ,libpng)
@@ -11017,14 +11145,14 @@ only sparse real matrices in Matrix package format are supported.")
(define-public r-speedglm
(package
(name "r-speedglm")
- (version "0.3-2")
+ (version "0.3-3")
(source
(origin
(method url-fetch)
(uri (cran-uri "speedglm" version))
(sha256
(base32
- "1b25zimk0z7ad62yacqdg0zk0qs0jja4i918ym942xfw4j1z3jjz"))))
+ "0f37w4lj8dpcg1sfkd7cv6qpdkanmb97mnd8zih2fxzv8bpd0rfh"))))
(build-system r-build-system)
(propagated-inputs
`(("r-mass" ,r-mass)
@@ -11401,14 +11529,14 @@ conditional reporting based on the current \"output level\".")
(define-public r-tractor-base
(package
(name "r-tractor-base")
- (version "3.3.2")
+ (version "3.3.3.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "tractor.base" version))
(sha256
(base32
- "0y5gm0y4chl30f5qqq8qiiw4j8g32s4i9xrvyp3cwg902kf2p86i"))))
+ "0w5jw7pf77npkgig7667yikpbwv4dfk1dcq63qm88l409ga2f95p"))))
(properties `((upstream-name . "tractor.base")))
(build-system r-build-system)
(propagated-inputs
@@ -11758,14 +11886,14 @@ preparing, executing, and processing HTTP requests.")
(define-public r-gmp
(package
(name "r-gmp")
- (version "0.6-1")
+ (version "0.6-2")
(source
(origin
(method url-fetch)
(uri (cran-uri "gmp" version))
(sha256
(base32
- "11rl7qmfrpp1974f0vzsi3zjyx147wlb82ydxak2b60khfvhrn90"))))
+ "03kzbflgpy5sgnzxmhshs5qv7jjmfc113ybkhxys4z8y7xdv9z3b"))))
(build-system r-build-system)
(arguments
'(#:phases
@@ -12254,17 +12382,19 @@ This makes it a convenient and fast interface to C/C++ and Fortran code.")
(define-public r-spam
(package
(name "r-spam")
- (version "2.5-1")
+ (version "2.6-0")
(source
(origin
(method url-fetch)
(uri (cran-uri "spam" version))
(sha256
- (base32 "0ry0a76cljlmilrzcriiizcidxyhq1i7i9bqhvl1qda81ld8hifi"))))
+ (base32 "0p5ycvpry955ldrgbbq3syy91wx9425mddpn8r5m9xwlirjxv3v3"))))
(build-system r-build-system)
(propagated-inputs
`(("r-dotcall64" ,r-dotcall64)))
- (native-inputs `(("gfortran" ,gfortran)))
+ (native-inputs
+ `(("gfortran" ,gfortran)
+ ("r-knitr" ,r-knitr)))
(home-page "https://www.math.uzh.ch/pages/spam/")
(synopsis "Sparse matrix algebra")
(description
@@ -12757,14 +12887,14 @@ them in distributed compute environments.")
(define-public r-parallelly
(package
(name "r-parallelly")
- (version "1.21.0")
+ (version "1.23.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "parallelly" version))
(sha256
(base32
- "1hlr81khr7z4x9gprymdh19mdq3nw6wm8d2795sd2pa3ya6phnb0"))))
+ "025whcz55wj9jd73dalkbxh4l2331mqn758glr6hlf472lwf4v1p"))))
(properties `((upstream-name . "parallelly")))
(build-system r-build-system)
(home-page "https://github.com/HenrikBengtsson/parallelly")
@@ -12785,14 +12915,14 @@ port-forwarding to your local computer.")
(define-public r-future
(package
(name "r-future")
- (version "1.20.1")
+ (version "1.21.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "future" version))
(sha256
(base32
- "14k00g8c9zgf77d6q7x2vibvlivzk2rzj7lwn7v7d9nr6prqzlb6"))))
+ "0bfiy17n5rghxw0702k0vgpjkk13268lniifdlx59flf0q16d7lh"))))
(build-system r-build-system)
(propagated-inputs
`(("r-digest" ,r-digest)
@@ -12818,14 +12948,14 @@ the local machine to, say, distributed processing on a remote compute cluster.")
(define-public r-future-apply
(package
(name "r-future-apply")
- (version "1.6.0")
+ (version "1.7.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "future.apply" version))
(sha256
(base32
- "1zbfycjfvxnrigm6l2fd2zgnw96g0apiw426c73gkv3xv7bdy6ms"))))
+ "1ns5cf80vyabvyz9qp6kpvkg4jycinn7x6v7x6692fgjapdnmyig"))))
(properties `((upstream-name . "future.apply")))
(build-system r-build-system)
(propagated-inputs
@@ -13131,14 +13261,14 @@ users of rARPACK are advised to switch to the RSpectra package.")
(define-public r-compositions
(package
(name "r-compositions")
- (version "2.0-0")
+ (version "2.0-1")
(source
(origin
(method url-fetch)
(uri (cran-uri "compositions" version))
(sha256
(base32
- "0xsx4n699q2r4pk2jrvifi3wi49lih7d1j3j6qgqqd31brg53jqr"))))
+ "03qslsfx11gshls901zlhw47prd55mf16w4mkmd8x1dgiwq938l4"))))
(build-system r-build-system)
(propagated-inputs
`(("r-bayesm" ,r-bayesm)
@@ -13419,17 +13549,19 @@ them (Anscombe-Glynn, D'Agostino, Bonett-Seier).")
(define-public r-msir
(package
(name "r-msir")
- (version "1.3.2")
+ (version "1.3.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "msir" version))
(sha256
(base32
- "0pvc3q162vqq3k39nni732x05zzfz4y9y2zf56d83185ypszv9kb"))))
+ "1wm83m3cqd6llxb9p2jwim0wb81v84pgdmgcznygzaaq6kbn3n84"))))
(build-system r-build-system)
(propagated-inputs
`(("r-mclust" ,r-mclust)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://cran.r-project.org/web/packages/msir")
(synopsis "Model-based sliced inverse regression")
(description
@@ -13611,14 +13743,14 @@ graphs.")
(define-public r-pbdzmq
(package
(name "r-pbdzmq")
- (version "0.3-3.1")
+ (version "0.3-4")
(source
(origin
(method url-fetch)
(uri (cran-uri "pbdZMQ" version))
(sha256
(base32
- "08qmrzazadkyxlqc8830r0pckaq10l3fgj1f198xy6wwrm2lf0wy"))))
+ "0adiac53yq305ymhrds1gas4jm0rn1ddv7c7df5ky2cfhpb4ny87"))))
(properties `((upstream-name . "pbdZMQ")))
(build-system r-build-system)
(inputs
@@ -14137,14 +14269,14 @@ barplots or heatmaps.")
(define-public r-seqinr
(package
(name "r-seqinr")
- (version "4.2-4")
+ (version "4.2-5")
(source
(origin
(method url-fetch)
(uri (cran-uri "seqinr" version))
(sha256
(base32
- "0pw035h17dmic8m0pb73fbyf6p4jbwggxjk5vpjlybn8dwd0rk93"))))
+ "1z1jipgrn9nrnxlx7bcf8c2chwpa3kfva0zgyb12xbr3kisn166y"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ade4" ,r-ade4)
@@ -14270,14 +14402,14 @@ sampling.")
(define-public r-deldir
(package
(name "r-deldir")
- (version "0.2-3")
+ (version "0.2-9")
(source
(origin
(method url-fetch)
(uri (cran-uri "deldir" version))
(sha256
(base32
- "0kin1hsd6dj36kkg7n328mzp21wwn9jm69lvgg2rvbf6bq7q091d"))))
+ "0jfwff5kk0zraspsvbk26lphl3fnrc6xmhl4690hr0a5k177ildm"))))
(build-system r-build-system)
(native-inputs `(("gfortran" ,gfortran)))
(home-page "https://cran.r-project.org/web/packages/deldir")
@@ -14294,14 +14426,14 @@ tessellation.")
(define-public r-sf
(package
(name "r-sf")
- (version "0.9-6")
+ (version "0.9-7")
(source
(origin
(method url-fetch)
(uri (cran-uri "sf" version))
(sha256
(base32
- "01yqlnx9v7lzb6g4ywjlncz67cnkizszarnf2dmd4fi8abhw4zs9"))))
+ "175fmnnw11fjhfgjv9sn9b0jfjcqbybpgwsvv99d5yddigvw5jja"))))
(build-system r-build-system)
(inputs
`(("gdal" ,gdal)
@@ -14907,14 +15039,14 @@ handle missing genotypes at some SNPs.")
(define-public r-sampling
(package
(name "r-sampling")
- (version "2.8")
+ (version "2.9")
(source
(origin
(method url-fetch)
(uri (cran-uri "sampling" version))
(sha256
(base32
- "06pj7dan0mknpsblmlnk7am78qrnwgnql5vvx7vmbfvib7rj6s9m"))))
+ "11xis4vzn2ga8ml9xrgfgqzccvwbnabq35aidzdvpnvciybsanvz"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lpsolve" ,r-lpsolve)
@@ -15180,14 +15312,14 @@ yeast.")
(define-public r-gridgraphics
(package
(name "r-gridgraphics")
- (version "0.5-0")
+ (version "0.5-1")
(source
(origin
(method url-fetch)
(uri (cran-uri "gridGraphics" version))
(sha256
(base32
- "0rlyc3xk8kfrfzbfd8n4javq3yxqd7lsfmi4q5n6s61srnrl6c1r"))))
+ "12yswy02j3h5wir7m5jnkhpjmb0sa4snn61vjd68i49qwsa6w219"))))
(properties `((upstream-name . "gridGraphics")))
(build-system r-build-system)
(home-page "https://github.com/pmur002/gridgraphics")
@@ -16075,14 +16207,14 @@ code edited with @code{RStudio IDE}, @code{Emacs} and @code{Vim}.")
(define-public r-sctransform
(package
(name "r-sctransform")
- (version "0.3.1")
+ (version "0.3.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "sctransform" version))
(sha256
(base32
- "0b8ni8dzlcikjm2bx5w8yi9vygx0qqxjrmnsy4kf7d1h03n2sxwa"))))
+ "1p3m6i28nlxh6r609syn88cwlbdpl3dw44dy3gsijk2ibq20mfsx"))))
(build-system r-build-system)
(propagated-inputs
`(("r-future" ,r-future)
@@ -16179,14 +16311,14 @@ parallel versions of vectorized R functions of the @code{mc*apply} family.")
(define-public r-blme
(package
(name "r-blme")
- (version "1.0-4")
+ (version "1.0-5")
(source
(origin
(method url-fetch)
(uri (cran-uri "blme" version))
(sha256
(base32
- "1ca2b0248k0fj3lczn9shfjplz1sl4ay4v6djldizp2ch2vwdgy2"))))
+ "0413j7gwr5yj14jamkizj55q7xii1a0kgazzj0ilqn2ascclz6k7"))))
(build-system r-build-system)
(propagated-inputs `(("r-lme4" ,r-lme4)))
(home-page "https://github.com/vdorie/blme")
@@ -16200,14 +16332,14 @@ extends the lme4 package.")
(define-public r-batchtools
(package
(name "r-batchtools")
- (version "0.9.14")
+ (version "0.9.15")
(source
(origin
(method url-fetch)
(uri (cran-uri "batchtools" version))
(sha256
(base32
- "1b78r70gm4a0wzjr367hqx2rfphfkbppp14d0l5zs2fvyz166lsx"))))
+ "0d2xy77hkzhcnyz8zxcv98i80fx6ripjw4rvyx4ww1d0vjjgqf52"))))
(build-system r-build-system)
(propagated-inputs
`(("r-backports" ,r-backports)
@@ -16593,20 +16725,19 @@ the current document.")
(define-public r-xgboost
(package
(name "r-xgboost")
- (version "1.2.0.1")
+ (version "1.3.2.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "xgboost" version))
(sha256
(base32
- "16hpvv2hwdzcyg90z7c1g5d2hj011qk8mivy4l2nqd2g7rkjwis4"))))
+ "117q8xqm82589517fi8xicd8724v9c0wnq3qpl84h6nm3aw65x1g"))))
(build-system r-build-system)
(propagated-inputs
`(("r-data-table" ,r-data-table)
("r-magrittr" ,r-magrittr)
- ("r-matrix" ,r-matrix)
- ("r-stringi" ,r-stringi)))
+ ("r-matrix" ,r-matrix)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/dmlc/xgboost")
@@ -16652,14 +16783,14 @@ in R, including a translation of the original algorithm into R.")
(define-public r-uwot
(package
(name "r-uwot")
- (version "0.1.9")
+ (version "0.1.10")
(source
(origin
(method url-fetch)
(uri (cran-uri "uwot" version))
(sha256
(base32
- "1iqvircvlxyd68n5279a0cwn5rc3pshxs7w1gqrns9c602xd6mhy"))))
+ "08vxh085wnrxgwy35ksb4cr7ccjvd98pyr2zlgarqryfgc1bdqbf"))))
(build-system r-build-system)
(propagated-inputs
`(("r-dqrng" ,r-dqrng)
@@ -16839,14 +16970,14 @@ guaranteeing well-connected communities.\" <arXiv:1810.08473>.")
(define-public r-patchwork
(package
(name "r-patchwork")
- (version "1.1.0")
+ (version "1.1.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "patchwork" version))
(sha256
(base32
- "13vswvcfmadmjz7pw0qdqdr6x85zbza4gljx2nx3a39hldj71yck"))))
+ "10glgkf58lcykcwda1hj6xdps02m3i247qynk6s2jmwljagps3fg"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
@@ -17164,14 +17295,14 @@ in pipelines.")
(define-public r-parameters
(package
(name "r-parameters")
- (version "0.10.1")
+ (version "0.11.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "parameters" version))
(sha256
(base32
- "1xvjvsdd0hql209f7v2l1nw7gy8jkj5qp0699p5m2h55a01jl778"))))
+ "020k3vxnp0vjrlkcxx5vj30vag474hw48zxzw9315whsq4hhhbqc"))))
(properties `((upstream-name . "parameters")))
(build-system r-build-system)
(propagated-inputs
@@ -17193,13 +17324,13 @@ effect size.")
(define-public r-rgdal
(package
(name "r-rgdal")
- (version "1.5-18")
+ (version "1.5-19")
(source
(origin
(method url-fetch)
(uri (cran-uri "rgdal" version))
(sha256
- (base32 "1pr267sh0v6cympdg12yny51cmn4r20s5sjq2hqymn4kphcpqijk"))))
+ (base32 "1cii2azm3zv5l6fn33xzwahp8349z3pb2769vpdxkf7734dxggvg"))))
(properties `((upstream-name . "rgdal")))
(build-system r-build-system)
(inputs
@@ -17811,14 +17942,14 @@ server-side.")
(define-public r-sysfonts
(package
(name "r-sysfonts")
- (version "0.8.2")
+ (version "0.8.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "sysfonts" version))
(sha256
(base32
- "1gapsiva0vjd2myxgm1avav6my5x00rmy2hx0qll7dm7v1isznbv"))))
+ "00kbazxw6zd1kakfshffdj928krca53bw9k78k0zar40mbqxiwd5"))))
(properties `((upstream-name . "sysfonts")))
(build-system r-build-system)
(inputs
@@ -17859,14 +17990,14 @@ package.")
(define-public r-showtext
(package
(name "r-showtext")
- (version "0.9-1")
+ (version "0.9-2")
(source
(origin
(method url-fetch)
(uri (cran-uri "showtext" version))
(sha256
(base32
- "1hq346k2lm7rv49hw7srn3ab5gcp6b0r4zc1kgsdmswyh3q1asra"))))
+ "0y5mw6ffk92r7b22irrfhdmj4hxfl0d1wjxj14hznbapc4qm6f0z"))))
(properties `((upstream-name . "showtext")))
(build-system r-build-system)
(inputs
@@ -18706,14 +18837,14 @@ identify file sets and individual files.")
(define-public r-r-devices
(package
(name "r-r-devices")
- (version "2.16.1")
+ (version "2.17.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "R.devices" version))
(sha256
(base32
- "15zlnq3g27whq26fbcy5zfl5hiddm256h4rga4frblg6wqlbkvdd"))))
+ "1djz6vm1b7sjvx1q319dl47gbnz9kvipaxcz9i0spyp094lv3m62"))))
(properties `((upstream-name . "R.devices")))
(build-system r-build-system)
(propagated-inputs
@@ -19351,14 +19482,14 @@ R.")
(define-public r-hdrcde
(package
(name "r-hdrcde")
- (version "3.3")
+ (version "3.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "hdrcde" version))
(sha256
(base32
- "0c2qbw4c3mq1cb068kjs72rxlbibz8svwcrx853jyr8ybs23z7ab"))))
+ "16qlk44cjvn2s0vzaf915df65ksdx20dbxhy7fpdqins46hccha3"))))
(properties `((upstream-name . "hdrcde")))
(build-system r-build-system)
(propagated-inputs
@@ -19432,14 +19563,14 @@ variable observed over time.")
(define-public r-fda
(package
(name "r-fda")
- (version "5.1.7")
+ (version "5.1.9")
(source
(origin
(method url-fetch)
(uri (cran-uri "fda" version))
(sha256
(base32
- "1r8hfi6x1maw5zz8k95wfcr7v69lg4zl3mcj69cvvq2mkg4y3158"))))
+ "0yjrjsv55bcwqn2yxjgj3hn17wfvjvgngfw9xv3w802i52yz9gf8"))))
(properties `((upstream-name . "fda")))
(build-system r-build-system)
(propagated-inputs
@@ -19539,20 +19670,22 @@ data for different accelerometer brands.")
(define-public r-activityindex
(package
(name "r-activityindex")
- (version "0.3.6")
+ (version "0.3.7")
(source
(origin
(method url-fetch)
(uri (cran-uri "ActivityIndex" version))
(sha256
(base32
- "14k6d78s15j7kb7jhixf4msrdjdl28d0r264cbvy41p8dkq7ysvk"))))
+ "1zj2b6x31a1kxl80rarmkrlm7ack4154mrkbqs3fpi48zpmjbgd5"))))
(properties `((upstream-name . "ActivityIndex")))
(build-system r-build-system)
(propagated-inputs
`(("r-data-table" ,r-data-table)
("r-matrixstats" ,r-matrixstats)
("r-r-utils" ,r-r-utils)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://cran.r-project.org/web/packages/ActivityIndex/")
(synopsis "Activity Index calculation using raw accelerometry data")
(description
@@ -19671,14 +19804,14 @@ API; see the package vignette for details.")
(define-public r-actuar
(package
(name "r-actuar")
- (version "3.0-0")
+ (version "3.1-0")
(source
(origin
(method url-fetch)
(uri (cran-uri "actuar" version))
(sha256
(base32
- "0dkp1sczldzy7kj70qvh1q59jhsq1brjybmxdz43jnx63y45llpz"))))
+ "15a8axb2ym46j8vlm7icwnsc950p8m66hp0armha7drk0725y77k"))))
(properties `((upstream-name . "actuar")))
(build-system r-build-system)
(propagated-inputs `(("r-expint" ,r-expint)))
@@ -21176,14 +21309,14 @@ least squares.")
(define-public r-semtools
(package
(name "r-semtools")
- (version "0.5-3")
+ (version "0.5-4")
(source
(origin
(method url-fetch)
(uri (cran-uri "semTools" version))
(sha256
(base32
- "0k3w10fnq0l89inhxvnypyrfhlrm921mfn0kwyyfpndvbqizky1d"))))
+ "15kban4ds2mssxqslm126b89p8biya14c9m68sqk61vzvx5dm2vq"))))
(properties `((upstream-name . "semTools")))
(build-system r-build-system)
(propagated-inputs
@@ -21227,14 +21360,14 @@ perform @dfn{exploratory mediation} (XMed).")
(define-public r-stanheaders
(package
(name "r-stanheaders")
- (version "2.21.0-6")
+ (version "2.21.0-7")
(source
(origin
(method url-fetch)
(uri (cran-uri "StanHeaders" version))
(sha256
(base32
- "1wwcrss4y6xbi81cg6ldhm57wz5paflzzp3yxh8b6shf9l2jla50"))))
+ "0srkyawyiykn3p5lw1z3zf18s4ax4iasv1ci3l1px40f9w36wm17"))))
(properties `((upstream-name . "StanHeaders")))
(build-system r-build-system)
(inputs `(("pandoc" ,pandoc)))
@@ -21912,13 +22045,13 @@ recommendations for developers.")
(define-public r-loo
(package
(name "r-loo")
- (version "2.4.0")
+ (version "2.4.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "loo" version))
(sha256
- (base32 "01a15ikfnyxhjhrgvy3ag929rg45dxp3wji1j38r4hg4q1yz4ma9"))))
+ (base32 "0l2v8zpashqbnck3qx5lp1gqjcfphzky8mxyw5gfk9wk99mzn8dw"))))
(properties `((upstream-name . "loo")))
(build-system r-build-system)
(inputs
@@ -22603,14 +22736,14 @@ is also implemented here.")
(define-public r-aws
(package
(name "r-aws")
- (version "2.5")
+ (version "2.5-1")
(source
(origin
(method url-fetch)
(uri (cran-uri "aws" version))
(sha256
(base32
- "1mwg1q7l4a07g5aa9c6kh3fpl9lakk01pbzlk7ixbpy12yfvj9nm"))))
+ "1fhm87iax6bkvd4vszvjbcqw3b2drs11rjxr7zf2w4sgc72svaz8"))))
(properties
`((upstream-name . "aws")))
(build-system r-build-system)
@@ -22978,19 +23111,26 @@ with posterior predictive checks and leave-one-out cross-validation.")
(define-public r-mstate
(package
(name "r-mstate")
- (version "0.2.12")
+ (version "0.3.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "mstate" version))
(sha256
(base32
- "0qnhivbibzss8yfsg44cvbf73n4jj4i28rbdysl88g14ig5sabgv"))))
+ "11i3p7fph8nbnfis1m7rdrq32qryaajv2wrkxk1x6k17zkh4rq6i"))))
(properties `((upstream-name . "mstate")))
(build-system r-build-system)
(propagated-inputs
- `(("r-rcolorbrewer" ,r-rcolorbrewer)
- ("r-survival" ,r-survival)))
+ `(("r-data-table" ,r-data-table)
+ ("r-lattice" ,r-lattice)
+ ("r-magrittr" ,r-magrittr)
+ ("r-rcolorbrewer" ,r-rcolorbrewer)
+ ("r-rlang" ,r-rlang)
+ ("r-survival" ,r-survival)
+ ("r-viridis" ,r-viridis)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page
"https://www.lumc.nl/org/bds/research/medische-statistiek/survival-analysis/")
(synopsis
@@ -23055,14 +23195,14 @@ permuted copies (shadows).")
(define-public r-directlabels
(package
(name "r-directlabels")
- (version "2020.6.17")
+ (version "2021.1.13")
(source
(origin
(method url-fetch)
(uri (cran-uri "directlabels" version))
(sha256
(base32
- "1b6v206kizz5rjw03chjvn40a7cqihjpk80h1h79z2x27hp1qi3f"))))
+ "0415kh9k2qzdwi8zb32fh2icl5wf5335kyj11cyfdmfxji39zv2w"))))
(build-system r-build-system)
(propagated-inputs
`(("r-quadprog" ,r-quadprog)))
@@ -23180,17 +23320,53 @@ by providing functionality for preprocessing, predicting, and validating
input.")
(license license:expat)))
+(define-public r-lightgbm
+ (package
+ (name "r-lightgbm")
+ (version "3.1.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "lightgbm" version))
+ (sha256
+ (base32
+ "1pwsh6j9ksahh58b15j5ij56bsc6syy3z4k4a5zhy5n7829rz555"))))
+ (properties `((upstream-name . "lightgbm")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-data-table" ,r-data-table)
+ ("r-jsonlite" ,r-jsonlite)
+ ("r-matrix" ,r-matrix)
+ ("r-r6" ,r-r6)))
+ (home-page "https://github.com/Microsoft/LightGBM")
+ (synopsis "Light gradient boosting machine")
+ (description
+ "Tree based algorithms can be improved by introducing boosting
+frameworks. LightGBM is one such framework, based on Ke, Guolin et
+al. (2017). This package offers an R interface to work with it. It is
+designed to be distributed and efficient with the following goals:
+
+@enumerate
+@item Faster training speed and higher efficiency;
+@item lower memory usage;
+@item better accuracy;
+@item parallel learning supported; and
+@item capable of handling large-scale data.
+@end enumerate
+")
+ (license license:expat)))
+
(define-public r-shapforxgboost
(package
(name "r-shapforxgboost")
- (version "0.0.4")
+ (version "0.1.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "SHAPforxgboost" version))
(sha256
(base32
- "0k6bg27wqnkzv82bcahbapmqhiz6rvnx81m23zbjw58c7lwshgnq"))))
+ "0jgyss9bawl7sf4dwa75sn7ld3mvrrr0z2074lbkq3f5qb9gwsly"))))
(properties
`((upstream-name . "SHAPforxgboost")))
(build-system r-build-system)
@@ -23201,6 +23377,7 @@ input.")
("r-ggforce" ,r-ggforce)
("r-ggplot2" ,r-ggplot2)
("r-ggpubr" ,r-ggpubr)
+ ("r-lightgbm" ,r-lightgbm)
("r-rcolorbrewer" ,r-rcolorbrewer)
("r-xgboost" ,r-xgboost)))
(home-page "https://github.com/liuyanguu/SHAPforxgboost")
@@ -23534,14 +23711,14 @@ diagonals. This package allows you to compute the tensor product of arrays.")
(define-public r-spatstat-utils
(package
(name "r-spatstat-utils")
- (version "1.17-0")
+ (version "1.20-2")
(source
(origin
(method url-fetch)
(uri (cran-uri "spatstat.utils" version))
(sha256
(base32
- "08h9kzkkxvlnngxnv5mdylfali5jj4yhgbr8kvf8l7glswz6ik9r"))))
+ "066f35017wpbz9plwc14gji3ddq4a1h2lx4mcgxajrcrk0zl3hk2"))))
(properties
`((upstream-name . "spatstat.utils")))
(build-system r-build-system)
@@ -23555,14 +23732,14 @@ which may also be useful for other purposes.")
(define-public r-spatstat-data
(package
(name "r-spatstat-data")
- (version "1.5-2")
+ (version "1.7-0")
(source
(origin
(method url-fetch)
(uri (cran-uri "spatstat.data" version))
(sha256
(base32
- "17vbf48g1mh8iigzzlaa9j4mw087hib7f1kkbl3c50xjcrr5iw6b"))))
+ "0by10dx72jjn6rvgrdj4xwh4zg6vxi4cp536aq4b6drb7za95hdv"))))
(properties `((upstream-name . "spatstat.data")))
(build-system r-build-system)
(propagated-inputs
@@ -23645,14 +23822,14 @@ for linear mixed models (AIREML).")
(define-public r-cpp11
(package
(name "r-cpp11")
- (version "0.2.4")
+ (version "0.2.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "cpp11" version))
(sha256
(base32
- "08lrmpfkwh1w290a5ikhs9yn1vn32wbgvbzb4n3zb2indb8s5g69"))))
+ "081f3b98mcxyilqsxbzzdnj2x6v7xycprrw7r5934163q0397vvg"))))
(properties `((upstream-name . "cpp11")))
(build-system r-build-system)
(native-inputs `(("r-knitr" ,r-knitr)))
@@ -24103,14 +24280,14 @@ coerce and verify the types and shapes of values for input checking.")
(define-public r-config
(package
(name "r-config")
- (version "0.3")
+ (version "0.3.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "config" version))
(sha256
(base32
- "0l67nfpm42ssnk0bl4jmq6bibz8hawgfgh2s14s5c8mnimv6mpjs"))))
+ "0l2zp7v6qaz72dclcbjrlis633zlwp8rsi5azr7iw127iyz7i26l"))))
(properties `((upstream-name . "config")))
(build-system r-build-system)
(propagated-inputs
@@ -24627,14 +24804,14 @@ consistent interface, and the package is built on the @code{stringi} and
(define-public r-hunspell
(package
(name "r-hunspell")
- (version "3.0")
+ (version "3.0.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "hunspell" version))
(sha256
(base32
- "0mwqw5p0ph083plm2hr2hqr50bjg2dw862dpsfm4l2fgyy3rryq1"))))
+ "0ql6y05d4xxpm468rslb0wxdp1x9l3flxzmb5w6pjg617f8vpv8z"))))
(properties `((upstream-name . "hunspell")))
(build-system r-build-system)
(propagated-inputs
@@ -24662,14 +24839,14 @@ vignettes in all common formats.")
(define-public r-tidytext
(package
(name "r-tidytext")
- (version "0.2.6")
+ (version "0.3.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "tidytext" version))
(sha256
(base32
- "0xmjkab7p13ncfglf3a9hvndf8fh96mmxw3l7hcpbnaq9qkiwk29"))))
+ "1icbfw4zkbs9sp6vk814mw2zzm0bc0d7af92vhriqxaga0gbwdkx"))))
(properties `((upstream-name . "tidytext")))
(build-system r-build-system)
(propagated-inputs
@@ -24677,12 +24854,14 @@ vignettes in all common formats.")
("r-generics" ,r-generics)
("r-hunspell" ,r-hunspell)
("r-janeaustenr" ,r-janeaustenr)
+ ("r-lifecycle" ,r-lifecycle)
("r-matrix" ,r-matrix)
("r-purrr" ,r-purrr)
("r-rlang" ,r-rlang)
("r-stringr" ,r-stringr)
("r-tibble" ,r-tibble)
- ("r-tokenizers" ,r-tokenizers)))
+ ("r-tokenizers" ,r-tokenizers)
+ ("r-vctrs" ,r-vctrs)))
(native-inputs
`(("r-knitr" ,r-knitr)))
(home-page "https://github.com/juliasilge/tidytext")
@@ -24695,14 +24874,14 @@ analysis using @code{dplyr}, @code{ggplot2}, and other Tidy tools.")
(define-public r-parsnip
(package
(name "r-parsnip")
- (version "0.1.4")
+ (version "0.1.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "parsnip" version))
(sha256
(base32
- "1134840xisvkkrbkh5kvx24vxp7sx06124svy573a9m4h8c492sr"))))
+ "0c12lyfxqsdprqlcmgy421py38z28h88d68pxb1c4fw14v1c2d06"))))
(properties `((upstream-name . "parsnip")))
(build-system r-build-system)
(propagated-inputs
@@ -24730,14 +24909,14 @@ functions or computational engines (e.g. R, Spark, Stan, etc).")
(define-public r-infer
(package
(name "r-infer")
- (version "0.5.3")
+ (version "0.5.4")
(source
(origin
(method url-fetch)
(uri (cran-uri "infer" version))
(sha256
(base32
- "1q0lnxnv8krv4n9z80sh4b442s89rvnbph5bddy34z83bkncwv2g"))))
+ "0wvvgqjhyv7ql98cjzqad61wbmk7xrqd1ybk894jr5cmza13c8w2"))))
(properties `((upstream-name . "infer")))
(build-system r-build-system)
(propagated-inputs
@@ -24952,14 +25131,14 @@ covariate (usually group indicator) and the scores.")
(define-public r-qtl
(package
(name "r-qtl")
- (version "1.46-2")
+ (version "1.47-9")
(source
(origin
(method url-fetch)
(uri (cran-uri "qtl" version))
(sha256
(base32
- "0rbwcnvyy96gq1dsgpxx03pv423qya26h6ws5y0blj3blfdmj83a"))))
+ "0hffirsvw9j82cdx6l7vhqn3a7ab52claqjlinv3lswl1nsfg93b"))))
(build-system r-build-system)
(home-page "https://rqtl.org/")
(synopsis "R package for analyzing QTL experiments in genetics")
@@ -24975,12 +25154,12 @@ genome scans.")
(define-public r-qtl2
(package
(name "r-qtl2")
- (version "0.22-11")
+ (version "0.24")
(source (origin
(method url-fetch)
(uri (cran-uri "qtl2" version))
(sha256
- (base32 "0dfdzjylqzc92dcszawc8cyinxccjm3p36v9vcq9ma818pqcanmr"))))
+ (base32 "1558khh0zkwm0rdk87krv9836krvwv5h7ymlz9bsrgcvypyr9186"))))
(build-system r-build-system)
(propagated-inputs
`(("r-data-table" ,r-data-table)
@@ -25046,16 +25225,39 @@ alignment using warping functions, handling of replicated measurements as well
as allowing spectra with different resolutions.")
(license license:gpl3+)))
+(define-public r-scattermore
+ (package
+ (name "r-scattermore")
+ (version "0.7")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (cran-uri "scattermore" version))
+ (sha256
+ (base32
+ "18nzlprmphkvjg946h10h2qq0wbkmv2526p8di6k2xl4gccq0qpk"))))
+ (properties `((upstream-name . "scattermore")))
+ (build-system r-build-system)
+ (propagated-inputs
+ `(("r-ggplot2" ,r-ggplot2)
+ ("r-scales" ,r-scales)))
+ (home-page "https://github.com/exaexa/scattermore")
+ (synopsis "Scatterplots with more points")
+ (description
+ "This package provides C-based tools for converting large scatterplot
+data to rasters. It speeds up plotting of data with millions of points.")
+ (license license:gpl3+)))
+
(define-public r-seurat
(package
(name "r-seurat")
- (version "3.2.2")
+ (version "3.2.3")
(source (origin
(method url-fetch)
(uri (cran-uri "Seurat" version))
(sha256
(base32
- "048vnj0c3mrwhr6yq3jqhgnkg68w99nj1ccsmgnd8rl694w26spj"))))
+ "11rzc7h2ad8z8k5r1sbz4d7y4rl3080qp2hh7vibwmipbkvlial3"))))
(properties `((upstream-name . "Seurat")))
(build-system r-build-system)
(propagated-inputs
@@ -25095,6 +25297,7 @@ as allowing spectra with different resolutions.")
("r-rsvd" ,r-rsvd)
("r-rtsne" ,r-rtsne)
("r-scales" ,r-scales)
+ ("r-scattermore" ,r-scattermore)
("r-sctransform" ,r-sctransform)
("r-shiny" ,r-shiny)
("r-spatstat" ,r-spatstat)
@@ -25200,18 +25403,20 @@ absolute GSEA.")
(define-public r-calculus
(package
(name "r-calculus")
- (version "0.2.1")
+ (version "0.3.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "calculus" version))
(sha256
(base32
- "0hs7hzjl6xjza20v9zx9a1piywxa6w3h2rskr52d1dcbc0vwhinp"))))
+ "1wa5ap89cfcp0ancj9ivx5s2y0wqr2vmp9y115g7f6g772jwhscj"))))
(properties `((upstream-name . "calculus")))
(build-system r-build-system)
(propagated-inputs
`(("r-rcpp" ,r-rcpp)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/eguidotti/calculus")
(synopsis "High dimensional numerical and symbolic calculus")
(description
@@ -25368,16 +25573,18 @@ Services (AWS) Simple Storage Service (S3) REST API.")
(define-public r-lgr
(package
(name "r-lgr")
- (version "0.4.1")
+ (version "0.4.2")
(source (origin
(method url-fetch)
(uri (cran-uri "lgr" version))
(sha256
(base32
- "196553hmni1ha9y6494f4g3ds0lwcl81v7k4r8wwap4a6acdrgd9"))))
+ "0k4kacjk7swm3gmdpha1rg44xb29vzvhvx48jhpb78glj5c9phyr"))))
(build-system r-build-system)
(propagated-inputs
`(("r-r6" ,r-r6)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://s-fleck.github.io/lgr/")
(synopsis "Fully featured logging framework")
(description "This package offers a flexible, feature-rich yet
@@ -25390,13 +25597,13 @@ well as email and push notifications.")
(define-public r-mlr3measures
(package
(name "r-mlr3measures")
- (version "0.3.0")
+ (version "0.3.1")
(source (origin
(method url-fetch)
(uri (cran-uri "mlr3measures" version))
(sha256
(base32
- "106lfaxphz0kh96ddq14hic7wvxjqp871zdp9kkkfk1kwfg35abw"))))
+ "18jk4kdj9771r16smz7xhmmiilcdg1qlavln5hrpvkx780zh3hj6"))))
(build-system r-build-system)
(propagated-inputs
`(("r-checkmate" ,r-checkmate)
@@ -25413,13 +25620,13 @@ are.")
(define-public r-mlr3misc
(package
(name "r-mlr3misc")
- (version "0.6.0")
+ (version "0.7.0")
(source (origin
(method url-fetch)
(uri (cran-uri "mlr3misc" version))
(sha256
(base32
- "1q63i2059bf7cf61kwm0dqnk5vd60i0j4flziswwdk07fjxqh8xr"))))
+ "19k3l2d6wnqvdng0m7p54rrlvwl5457lcy7bg82m2bbpqxi8qch3"))))
(build-system r-build-system)
(propagated-inputs
`(("r-backports" ,r-backports)
diff --git a/gnu/packages/crates-graphics.scm b/gnu/packages/crates-graphics.scm
index 02bf7b27a4..ca1fd9b3a7 100644
--- a/gnu/packages/crates-graphics.scm
+++ b/gnu/packages/crates-graphics.scm
@@ -8,7 +8,7 @@
;;; Copyright © 2020 Danny Milosavljevic <dannym@scratchpost.org>
;;; Copyright © 2020 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2020 Leo Famulari <leo@famulari.name>
-;;; Copyright © 2020 Nicolas Goaziou <mail@nicolasgoaziou.fr>
+;;; Copyright © 2020, 2021 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2020 Antoine Côté <antoine.cote@posteo.net>
;;;
;;; This file is part of GNU Guix.
@@ -62,7 +62,7 @@
("rust-line-drawing" ,rust-line-drawing-0.7)
("rust-rusttype" ,rust-rusttype-0.7)
("rust-walkdir" ,rust-walkdir-2)
- ("rust-xdg" ,rust-xdg-2.2)
+ ("rust-xdg" ,rust-xdg-2)
("rust-xml-rs" ,rust-xml-rs-0.8))
#:cargo-development-inputs
(("rust-smithay-client-toolkit" ,rust-smithay-client-toolkit-0.4))))
diff --git a/gnu/packages/crates-io.scm b/gnu/packages/crates-io.scm
index 38d6fe806a..36f0b98112 100644
--- a/gnu/packages/crates-io.scm
+++ b/gnu/packages/crates-io.scm
@@ -993,10 +993,10 @@ block ciphers using AES-NI.")
("rust-lazy-static" ,rust-lazy-static-1)
("rust-libc" ,rust-libc-0.2)
("rust-rustc-version" ,rust-rustc-version-0.2)
- ("rust-xdg" ,rust-xdg-2.2))
+ ("rust-xdg" ,rust-xdg-2))
#:cargo-development-inputs
(("rust-rustc-version" ,rust-rustc-version-0.2)
- ("rust-xdg" ,rust-xdg-2.2))))
+ ("rust-xdg" ,rust-xdg-2))))
(home-page "https://github.com/rust-fuzz/afl.rs")
(synopsis
"Fuzzing Rust code with american-fuzzy-lop")
@@ -1023,11 +1023,11 @@ block ciphers using AES-NI.")
#:cargo-inputs
(("rust-rustc-version" ,rust-rustc-version-0.2)
("rust-cc" ,rust-cc-1)
- ("rust-xdg" ,rust-xdg-2.2)
+ ("rust-xdg" ,rust-xdg-2)
("rust-clap" ,rust-clap-2))
#:cargo-development-inputs
(("rust-rustc-version" ,rust-rustc-version-0.2)
- ("rust-xdg" ,rust-xdg-2.2))))))
+ ("rust-xdg" ,rust-xdg-2))))))
(define-public rust-afl-0.4
(package
@@ -1103,25 +1103,23 @@ using AES-NI for high performance.")
(define-public rust-aho-corasick-0.7
(package
(name "rust-aho-corasick")
- (version "0.7.13")
+ (version "0.7.15")
(source
(origin
(method url-fetch)
(uri (crate-uri "aho-corasick" version))
- (file-name
- (string-append name "-" version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32
- "11hfmqf90rdvjdpk0x1lixw1s9n08y3fxfy9zqsk0k2wpbc68c84"))))
+ (base32 "1rb8gzhljl8r87dpf2n5pnqnkl694casgns4ma0sqzd4zazzw13l"))))
(build-system cargo-build-system)
(arguments
- `(#:cargo-inputs (("rust-memchr" ,rust-memchr-2))
+ `(#:cargo-inputs
+ (("rust-memchr" ,rust-memchr-2))
#:cargo-development-inputs
(("rust-doc-comment" ,rust-doc-comment-0.3))))
(home-page "https://github.com/BurntSushi/aho-corasick")
(synopsis "Fast multiple substring searching")
- (description
- "Fast multiple substring searching.")
+ (description "This package provides a fast multiple substring searching.")
(license (list license:unlicense license:expat))))
(define-public rust-aho-corasick-0.6
@@ -1415,6 +1413,35 @@ escape codes.")
@code{std::error::Error}.")
(license (list license:expat license:asl2.0))))
+(define-public rust-app-dirs2-2
+ (package
+ (name "rust-app-dirs2")
+ (version "2.3.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "app_dirs2" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "04v2q3jkqr32mwqs4niqfyhbkvvgrcsw0dajwqaz83nc5hs1igsm"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:cargo-inputs
+ (("rust-jni" ,rust-jni-0.18)
+ ("rust-ndk-glue" ,rust-ndk-glue-0.2)
+ ("rust-winapi" ,rust-winapi-0.3)
+ ("rust-xdg" ,rust-xdg-2))
+ #:cargo-development-inputs
+ (("rust-lazy-static" ,rust-lazy-static-1)
+ ("rust-tempfile" ,rust-tempfile-3)
+ ("rust-test-case" ,rust-test-case-1))))
+ (home-page "https://lib.rs/app_dirs2")
+ (synopsis "Put app's data in the right place on every platform")
+ (description
+ "This package helps you to put your app's data in the right place
+on every platform.")
+ (license license:expat)))
+
(define-public rust-approx-0.3
(package
(name "rust-approx")
@@ -2491,15 +2518,14 @@ crate.")
(define-public rust-async-trait-0.1
(package
(name "rust-async-trait")
- (version "0.1.40")
+ (version "0.1.42")
(source
(origin
(method url-fetch)
(uri (crate-uri "async-trait" version))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32
- "10x7jcg8xqvkmqyz11117aw959p4af5gq1cpf022b9f0hl6j6z38"))))
+ (base32 "0gd13pqgw5m6l4bqwjkickq13c4v0jxzxs5i4dwmldrlgvklafld"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
@@ -3366,12 +3392,43 @@ bindings to C and C++ libraries.")
("rust-quote" ,rust-quote-0.6)
("rust-regex" ,rust-regex-1)
("rust-shlex" ,rust-shlex-0.1)
- ("rust-which" ,rust-which-2.0))
+ ("rust-which" ,rust-which-2))
#:cargo-development-inputs
(("rust-clap" ,rust-clap-2)
("rust-diff" ,rust-diff-0.1)
("rust-shlex" ,rust-shlex-0.1))))))
+(define-public rust-bindgen-0.47
+ (package
+ (inherit rust-bindgen-0.50)
+ (name "rust-bindgen")
+ (version "0.47.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "bindgen" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "0b9fyq3h4lz5xfy6gv5h8v6j3hzyqcarlylvw9zc715pas1pz09a"))))
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-bitflags" ,rust-bitflags-1)
+ ("rust-cexpr" ,rust-cexpr-0.3)
+ ("rust-cfg-if" ,rust-cfg-if-0.1)
+ ("rust-clang-sys" ,rust-clang-sys-0.26)
+ ("rust-clap" ,rust-clap-2)
+ ("rust-env-logger" ,rust-env-logger-0.6)
+ ("rust-hashbrown" ,rust-hashbrown-0.1)
+ ("rust-lazy-static" ,rust-lazy-static-1)
+ ("rust-log" ,rust-log-0.4)
+ ("rust-peeking-take-while" ,rust-peeking-take-while-0.1)
+ ("rust-proc-macro2" ,rust-proc-macro2-0.4)
+ ("rust-quote" ,rust-quote-0.6)
+ ("rust-regex" ,rust-regex-1)
+ ("rust-shlex" ,rust-shlex-0.1)
+ ("rust-which" ,rust-which-2))))))
+
(define-public rust-bindgen-0.46
(package
(inherit rust-bindgen-0.50)
@@ -3401,7 +3458,7 @@ bindings to C and C++ libraries.")
("rust-proc-macro2" ,rust-proc-macro2-0.4)
("rust-quote" ,rust-quote-0.6)
("rust-regex" ,rust-regex-1)
- ("rust-which" ,rust-which-2.0))
+ ("rust-which" ,rust-which-2))
#:cargo-development-inputs
(("rust-clap" ,rust-clap-2)
("rust-diff" ,rust-diff-0.1)
@@ -3470,7 +3527,7 @@ bindings to C and C++ libraries.")
("rust-quote" ,rust-quote-0.6)
("rust-regex" ,rust-regex-1)
("rust-shlex" ,rust-shlex-0.1)
- ("rust-which" ,rust-which-2.0))
+ ("rust-which" ,rust-which-2))
#:cargo-development-inputs
(("rust-clap" ,rust-clap-2)
("rust-diff" ,rust-diff-0.1)
@@ -4662,28 +4719,23 @@ in a byte slice, fast.")
(define-public rust-byteorder-1
(package
(name "rust-byteorder")
- (version "1.3.4")
+ (version "1.4.2")
(source
(origin
(method url-fetch)
(uri (crate-uri "byteorder" version))
- (file-name
- (string-append name "-" version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32
- "1pkjfhgjnq898g1d38ygcfi0msg3m6756cwv0sgysj1d26p8mi08"))))
+ (base32 "0srh0h0594jmsnbvm7n0g8xabhla8lwb3gn8s0fzd7d1snix2i5f"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-development-inputs
- (("rust-doc-comment" ,rust-doc-comment-0.3)
- ("rust-quickcheck" ,rust-quickcheck-0.8)
- ("rust-rand" ,rust-rand-0.6))))
- (home-page
- "https://github.com/BurntSushi/byteorder")
- (synopsis
- "Reading/writing numbers in big-endian and little-endian")
+ (("rust-quickcheck" ,rust-quickcheck-0.9)
+ ("rust-rand" ,rust-rand-0.7))))
+ (home-page "https://github.com/BurntSushi/byteorder")
+ (synopsis "Reading/writing numbers in big-endian and little-endian")
(description
- "Library for reading/writing numbers in big-endian and
+ "This library is used for reading or writing numbers in big-endian and
little-endian.")
(license (list license:expat license:unlicense))))
@@ -5498,6 +5550,31 @@ chain, the first matching branch is the item that gets emitted.")
(description "Date and time library for Rust.")
(license (list license:expat license:asl2.0))))
+(define-public rust-chrono-tz-0.5
+ (package
+ (name "rust-chrono-tz")
+ (version "0.5.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "chrono-tz" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "085i4940kn0fn4gkl3xi1kv3vp2frhfig1vla1i461pcbwas6m15"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-chrono" ,rust-chrono-0.4)
+ ("rust-parse-zoneinfo" ,rust-parse-zoneinfo-0.3)
+ ("rust-serde" ,rust-serde-1))))
+ (home-page "https://github.com/chronotope/chrono-tz")
+ (synopsis "TimeZone implementations for rust-chrono from the IANA database")
+ (description
+ "Chrono-TZ is a library that provides implementors of the
+TimeZone trait for @code{rust-chrono}.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-ci-info-0.3
(package
(name "rust-ci-info")
@@ -6062,8 +6139,43 @@ programming languages.")
(sha256
(base32 "0fildacm47g86acmx44yvxx6cka8fdym5qkgfm8x8gh2hsrghc7r"))))))
+(define-public rust-combine-4
+ (package
+ (name "rust-combine")
+ (version "4.5.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "combine" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "0zkvqp21fbhznf7sjssdiw3zgx3x3q8w10c9mmjdzkf0wjsnjhyc"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-bytes" ,rust-bytes-0.5)
+ ("rust-bytes" ,rust-bytes-1)
+ ("rust-futures-io" ,rust-futures-io-0.3)
+ ("rust-futures-util" ,rust-futures-util-0.3)
+ ("rust-memchr" ,rust-memchr-2)
+ ("rust-pin-project-lite" ,rust-pin-project-lite-0.2)
+ ("rust-regex" ,rust-regex-1)
+ ("rust-tokio" ,rust-tokio-1)
+ ("rust-tokio" ,rust-tokio-0.2)
+ ("rust-tokio" ,rust-tokio-0.3))))
+ (home-page "https://github.com/Marwes/combine")
+ (synopsis "Parser combinators on arbitrary streams with zero-copy support")
+ (description
+ "This package is an implementation of parser combinators for Rust,
+inspired by the Haskell library Parsec. As in Parsec the parsers are LL(1) by
+default but they can opt-in to arbitrary lookahead using the attempt
+combinator.")
+ (license license:expat)))
+
(define-public rust-combine-3
(package
+ (inherit rust-combine-4)
(name "rust-combine")
(version "3.8.1")
(source
@@ -6073,7 +6185,6 @@ programming languages.")
(file-name (string-append name "-" version ".tar.gz"))
(sha256
(base32 "1006sbl3ybiky3d5q28p0lyph37hk7sipls1rkhikv11lfxacgfs"))))
- (build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-ascii" ,rust-ascii-0.9)
@@ -6088,15 +6199,7 @@ programming languages.")
("rust-bytes" ,rust-bytes-0.4)
("rust-futures" ,rust-futures-0.1)
("rust-partial-io" ,rust-partial-io-0.3)
- ("rust-tokio-codec" ,rust-tokio-codec-0.1))))
- (home-page "https://github.com/Marwes/combine")
- (synopsis "Parser combinators on arbitrary streams with zero-copy support")
- (description
- "This package is an implementation of parser combinators for Rust,
-inspired by the Haskell library Parsec. As in Parsec the parsers are LL(1) by
-default but they can opt-in to arbitrary lookahead using the attempt
-combinator.")
- (license license:expat)))
+ ("rust-tokio-codec" ,rust-tokio-codec-0.1))))))
(define-public rust-combine-regex-1-1
(package
@@ -7270,8 +7373,34 @@ criterion.")
(description "Tools for concurrent programming.")
(license (list license:expat license:asl2.0))))
+(define-public rust-crossbeam-channel-0.5
+ (package
+ (name "rust-crossbeam-channel")
+ (version "0.5.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "crossbeam-channel" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "0xfplw54pskl3kyf2q6kw8y2phnq6wn8pqxx003n8qfkz3hnx8nw"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-cfg-if" ,rust-cfg-if-1)
+ ("rust-crossbeam-utils" ,rust-crossbeam-utils-0.8))))
+ (home-page
+ "https://github.com/crossbeam-rs/crossbeam/tree/master/crossbeam-channel")
+ (synopsis "Multi-producer multi-consumer channels for message passing")
+ (description
+ "This package provides multi-producer multi-consumer channels for
+message passing.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-crossbeam-channel-0.4
(package
+ (inherit rust-crossbeam-channel-0.5)
(name "rust-crossbeam-channel")
(version "0.4.2")
(source
@@ -7283,7 +7412,6 @@ criterion.")
(sha256
(base32
"0qd05n5bcwafkmbzq1lspwrfi29xnzlw46qarg1sl0lwj68qdvfc"))))
- (build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-crossbeam-utils" ,rust-crossbeam-utils-0.7)
@@ -7291,16 +7419,7 @@ criterion.")
#:cargo-development-inputs
(("rust-num-cpus" ,rust-num-cpus-1)
("rust-rand" ,rust-rand-0.6)
- ("rust-signal-hook" ,rust-signal-hook-0.1))))
- (home-page
- "https://github.com/crossbeam-rs/crossbeam/tree/master/crossbeam-channel")
- (synopsis
- "Multi-producer multi-consumer channels for message passing")
- (description
- "Multi-producer multi-consumer channels for message passing.")
- (license (list license:expat
- license:asl2.0
- license:bsd-2))))
+ ("rust-signal-hook" ,rust-signal-hook-0.1))))))
(define-public rust-crossbeam-channel-0.3
(package
@@ -7324,8 +7443,33 @@ criterion.")
("rust-rand" ,rust-rand-0.6)
("rust-signal-hook" ,rust-signal-hook-0.1))))))
+(define-public rust-crossbeam-deque-0.8
+ (package
+ (name "rust-crossbeam-deque")
+ (version "0.8.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "crossbeam-deque" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "1ad995vzq74k7jd1pgn9zxbacyzj9ii6l0svhlb2dxzy8vxnxbwl"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-cfg-if" ,rust-cfg-if-1)
+ ("rust-crossbeam-epoch" ,rust-crossbeam-epoch-0.9)
+ ("rust-crossbeam-utils" ,rust-crossbeam-utils-0.8))))
+ (home-page
+ "https://github.com/crossbeam-rs/crossbeam/tree/master/crossbeam-deque")
+ (synopsis "Concurrent work-stealing deque")
+ (description "This package provides a concurrent work-stealing deque.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-crossbeam-deque-0.7
(package
+ (inherit rust-crossbeam-deque-0.8)
(name "rust-crossbeam-deque")
(version "0.7.3")
(source
@@ -7337,19 +7481,13 @@ criterion.")
(sha256
(base32
"11c2c0x5grdba3ah3g94yn6b8s47xi8qwm85h8hq5vmf9nbsy0lz"))))
- (build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-crossbeam-epoch" ,rust-crossbeam-epoch-0.8)
("rust-crossbeam-utils" ,rust-crossbeam-utils-0.7)
("rust-maybe-uninit" ,rust-maybe-uninit-2.0))
#:cargo-development-inputs
- (("rust-rand" ,rust-rand-0.6))))
- (home-page
- "https://github.com/crossbeam-rs/crossbeam/tree/master/crossbeam-deque")
- (synopsis "Concurrent work-stealing deque")
- (description "Concurrent work-stealing deque.")
- (license (list license:expat license:asl2.0))))
+ (("rust-rand" ,rust-rand-0.6))))))
(define-public rust-crossbeam-deque-0.6
(package
@@ -7372,8 +7510,36 @@ criterion.")
#:cargo-development-inputs
(("rust-rand" ,rust-rand-0.6))))))
+(define-public rust-crossbeam-epoch-0.9
+ (package
+ (name "rust-crossbeam-epoch")
+ (version "0.9.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "crossbeam-epoch" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "17anyfg5azjpmcfidq6wn4phj9h0a0zqcxksi33w44akz4wsgam1"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-cfg-if" ,rust-cfg-if-1)
+ ("rust-const-fn" ,rust-const-fn-0.4)
+ ("rust-crossbeam-utils" ,rust-crossbeam-utils-0.8)
+ ("rust-lazy-static" ,rust-lazy-static-1)
+ ("rust-memoffset" ,rust-memoffset-0.6)
+ ("rust-scopeguard" ,rust-scopeguard-1))))
+ (home-page
+ "https://github.com/crossbeam-rs/crossbeam/tree/master/crossbeam-epoch")
+ (synopsis "Epoch-based garbage collection")
+ (description "This package provides an Epoch-based garbage collection.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-crossbeam-epoch-0.8
(package
+ (inherit rust-crossbeam-epoch-0.9)
(name "rust-crossbeam-epoch")
(version "0.8.2")
(source
@@ -7385,7 +7551,6 @@ criterion.")
(sha256
(base32
"1knsf0zz7rgzxn0nwz5gajjcrivxpw3zrdcp946gdhdgr9sd53h5"))))
- (build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-autocfg" ,rust-autocfg-1)
@@ -7396,12 +7561,7 @@ criterion.")
("rust-memoffset" ,rust-memoffset-0.5)
("rust-scopeguard" ,rust-scopeguard-1))
#:cargo-development-inputs
- (("rust-rand" ,rust-rand-0.6))))
- (home-page
- "https://github.com/crossbeam-rs/crossbeam/tree/master/crossbeam-epoch")
- (synopsis "Epoch-based garbage collection")
- (description "Epoch-based garbage collection.")
- (license (list license:expat license:asl2.0))))
+ (("rust-rand" ,rust-rand-0.6))))))
(define-public rust-crossbeam-epoch-0.7
(package
@@ -7631,7 +7791,7 @@ Code} (MAC) algorithms.")
(string-append name "-" version ".tar.gz"))
(sha256
(base32
- "1rbrq6qy9dl0pj4ym2zy33miaaa8vpzdss60p9bdb58xy46l0d24"))))
+ "1axfs4zmy74rn9666p92j7nmcv11zdp2d51yrppc2dv26cqa715m"))))
(arguments
`(#:cargo-inputs
(("rust-blobby" ,rust-blobby-0.1)
@@ -8458,8 +8618,35 @@ reading attributes into structs when implementing custom derives.")
reading attributes into structs when implementing custom derives.")
(license license:expat)))
+(define-public rust-dashmap-4
+ (package
+ (name "rust-dashmap")
+ (version "4.0.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "dashmap" version))
+ (file-name
+ (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "1773x18k5m2zw1iyibs8l3wl1p1aijdbrc0w844xys06inr46yp7"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-cfg-if" ,rust-cfg-if-1)
+ ("rust-num-cpus" ,rust-num-cpus-1)
+ ("rust-rayon" ,rust-rayon-1)
+ ("rust-serde" ,rust-serde-1))))
+ (home-page "https://github.com/xacrimon/dashmap")
+ (synopsis "Blazing fast concurrent HashMap for Rust.")
+ (description "This package implements a blazing fast concurrent HashMap
+for Rust.")
+ (license license:expat)))
+
(define-public rust-dashmap-3
(package
+ (inherit rust-dashmap-4)
(name "rust-dashmap")
(version "3.11.10")
(source
@@ -8480,7 +8667,6 @@ reading attributes into structs when implementing custom derives.")
"#![feature(inner_deref)]" "\n"
all)))
#t))))
- (build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-ahash" ,rust-ahash-0.3)
@@ -8491,12 +8677,7 @@ reading attributes into structs when implementing custom derives.")
(add-after 'unpack 'enable-unstable-features
(lambda _
(setenv "RUSTC_BOOTSTRAP" "1")
- #t)))))
- (home-page "https://github.com/xacrimon/dashmap")
- (synopsis "Blazing fast concurrent HashMap for Rust")
- (description "This package implements a blazing fast concurrent HashMap
-for Rust.")
- (license license:expat)))
+ #t)))))))
(define-public rust-data-encoding-2
(package
@@ -9004,6 +9185,26 @@ traits for both structs and enums.")
structs and enums.")
(license license:expat)))
+(define-public rust-deunicode-0.4
+ (package
+ (name "rust-deunicode")
+ (version "0.4.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "deunicode" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "146nc3wlwz2j9awwf7zf76qvjcahnls0mlv9jm6clcvr9dlph245"))))
+ (build-system cargo-build-system)
+ (arguments `(#:skip-build? #t))
+ (home-page "https://lib.rs/crates/deunicode")
+ (synopsis "Convert Unicode strings to pure ASCII")
+ (description
+ "This package converts Unicode strings to pure ASCII by
+intelligently transliterating them. It supports Emoji and Chinese.")
+ (license license:bsd-3)))
+
(define-public rust-dialoguer-0.6
(package
(name "rust-dialoguer")
@@ -9586,7 +9787,7 @@ from macros.")
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
- (("rust-which" ,rust-which-2.0))))
+ (("rust-which" ,rust-which-2))))
(home-page "https://github.com/assert-rs/docmatic")
(synopsis "Test Rust examples in your documentation")
(description "Test Rust examples in your documentation.")
@@ -13771,15 +13972,14 @@ path simultaneously, and returning all of the globs that matched.")
(define-public rust-globwalk-0.8
(package
(name "rust-globwalk")
- (version "0.8.0")
+ (version "0.8.1")
(source
(origin
(method url-fetch)
(uri (crate-uri "globwalk" version))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32
- "0ihld70ngnri1qd8sd61099yfzcl6iqn17rfa102q1bl6ck710hp"))))
+ (base32 "1k6xwkydr7igvwjn3xkwjywk4213lcs53f576ilqz1h84jaazqwk"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
@@ -13978,7 +14178,7 @@ loading crate.")
("rust-lazy-static" ,rust-lazy-static-1)
("rust-log" ,rust-log-0.4)
("rust-regex" ,rust-regex-1)
- ("rust-same-file" ,rust-same-file-1.0)
+ ("rust-same-file" ,rust-same-file-1)
("rust-termcolor" ,rust-termcolor-1)
("rust-winapi-util" ,rust-winapi-util-0.1))))
(home-page
@@ -15607,36 +15807,34 @@ let} expressions.")
(define-public rust-ignore-0.4
(package
(name "rust-ignore")
- (version "0.4.16")
+ (version "0.4.17")
(source
(origin
(method url-fetch)
(uri (crate-uri "ignore" version))
- (file-name
- (string-append name "-" version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32
- "0wpcv4qgfzcyzydhlqa2qr56j72fj1a66s11xzdji59898mbzp12"))))
+ (base32 "1347mxd0cwiidcl0qvixl7za524x5ds0izv8vjh2df0bqr2zp1xj"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
- (("rust-crossbeam-utils" ,rust-crossbeam-utils-0.7)
+ (("rust-crossbeam-utils" ,rust-crossbeam-utils-0.8)
("rust-globset" ,rust-globset-0.4)
("rust-lazy-static" ,rust-lazy-static-1)
("rust-log" ,rust-log-0.4)
("rust-memchr" ,rust-memchr-2)
("rust-regex" ,rust-regex-1)
- ("rust-same-file" ,rust-same-file-1.0)
+ ("rust-same-file" ,rust-same-file-1)
("rust-thread-local" ,rust-thread-local-1)
("rust-walkdir" ,rust-walkdir-2)
("rust-winapi-util" ,rust-winapi-util-0.1))
#:cargo-development-inputs
- (("rust-crossbeam-channel" ,rust-crossbeam-channel-0.4))))
- (home-page "https://github.com/BurntSushi/ripgrep/tree/master/ignore")
- (synopsis "Efficiently match ignore files such as .gitignore")
+ (("rust-crossbeam-channel" ,rust-crossbeam-channel-0.5))))
+ (home-page "https://github.com/BurntSushi/ripgrep/tree/master/crates/ignore")
+ (synopsis "Efficiently match ignore files such as @file{.gitignore}")
(description
"This package provides a fast library for efficiently matching
-ignore files such as .gitignore against file paths.")
+ignore files such as @file{.gitignore} against file paths.")
(license (list license:unlicense license:expat))))
(define-public rust-indexmap-1
@@ -15710,6 +15908,33 @@ or numerical index. A corresponding hash set type is also provided.")
Rust.")
(license license:expat)))
+(define-public rust-indoc-1
+ (package
+ (name "rust-indoc")
+ (version "1.0.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "indoc" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "0diih20xsxjb159nr0dq6jxnyhq7gg10dlsnh2siikphmvm5m9z5"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #true
+ #:cargo-inputs
+ (("rust-unindent" ,rust-unindent-0.1))
+ #:cargo-development-inputs
+ (("rust-rustversion" ,rust-rustversion-1)
+ ("rust-trybuild" ,rust-trybuild-1))))
+ (home-page "https://github.com/dtolnay/indoc")
+ (synopsis "Indented document literals for Rust")
+ (description
+ "This crate provides a procedural macro for indented string literals.
+The @code{indoc!()} macro takes a multiline string literal and un-indents it
+at compile time so the leftmost non-space character is in the first column.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-infer-0.2
(package
(name "rust-infer")
@@ -16639,25 +16864,25 @@ primitives to an @code{io::Write}.")
(native-inputs
`(("jemalloc" ,jemalloc)))))
-(define-public rust-jni-0.14
+(define-public rust-jni-0.18
(package
(name "rust-jni")
- (version "0.14.0")
+ (version "0.18.0")
(source
(origin
(method url-fetch)
(uri (crate-uri "jni" version))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32 "00jl4jzzbbcf1nyziras5drp501xsk89g0132pwg194ilh6k308r"))))
+ (base32 "1brglk3kfia9wkr6rkm6p297b8qk6rv3k8rf6jjiqc74l49735i4"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-cesu8" ,rust-cesu8-1)
- ("rust-combine" ,rust-combine-3)
- ("rust-error-chain" ,rust-error-chain-0.12)
+ ("rust-combine" ,rust-combine-4)
("rust-jni-sys" ,rust-jni-sys-0.3)
("rust-log" ,rust-log-0.4)
+ ("rust-thiserror" ,rust-thiserror-1)
("rust-walkdir" ,rust-walkdir-2))
#:cargo-development-inputs
(("rust-lazy-static" ,rust-lazy-static-1))))
@@ -16670,6 +16895,29 @@ code from Rust, embed JVM in Rust applications and use any Java
libraries.")
(license (list license:expat license:asl2.0))))
+(define-public rust-jni-0.14
+ (package
+ (inherit rust-jni-0.18)
+ (name "rust-jni")
+ (version "0.14.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "jni" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "00jl4jzzbbcf1nyziras5drp501xsk89g0132pwg194ilh6k308r"))))
+ (arguments
+ `(#:cargo-inputs
+ (("rust-cesu8" ,rust-cesu8-1)
+ ("rust-combine" ,rust-combine-3)
+ ("rust-error-chain" ,rust-error-chain-0.12)
+ ("rust-jni-sys" ,rust-jni-sys-0.3)
+ ("rust-log" ,rust-log-0.4)
+ ("rust-walkdir" ,rust-walkdir-2))
+ #:cargo-development-inputs
+ (("rust-lazy-static" ,rust-lazy-static-1))))))
+
(define-public rust-jni-glue-0.0
(package
(name "rust-jni-glue")
@@ -16791,6 +17039,73 @@ friction with idiomatic Rust structs to ease interopability.")
(license (list license:asl2.0
license:expat))))
+(define-public rust-juniper-codegen-0.14
+ (package
+ (name "rust-juniper-codegen")
+ (version "0.14.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "juniper_codegen" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "06ym8568k9p75kvnfc4ywqbkzaa4ib6gngx9vpbsjwg9v0sg42nl"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:tests? #false ;FIXME: fail due to unresolved import
+ #:cargo-inputs
+ (("rust-proc-macro2" ,rust-proc-macro2-1)
+ ("rust-quote" ,rust-quote-1)
+ ("rust-syn" ,rust-syn-1))
+ #:cargo-development-inputs
+ (("rust-juniper" ,rust-juniper-0.14))))
+ (home-page "https://github.com/graphql-rust/juniper")
+ (synopsis "Internal custom derive trait for Juniper GraphQL")
+ (description
+ "This package provides an internal custom derive trait for Juniper
+GraphQL.")
+ (license license:bsd-2)))
+
+(define-public rust-juniper-0.14
+ (package
+ (name "rust-juniper")
+ (version "0.14.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "juniper" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "0s56rb31yddhvjynl5bk8jihcdln8h5yfsx63kfxdhzvw98vlqpn"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:cargo-inputs
+ (("rust-chrono" ,rust-chrono-0.4)
+ ("rust-fnv" ,rust-fnv-1)
+ ("rust-indexmap" ,rust-indexmap-1)
+ ("rust-juniper-codegen" ,rust-juniper-codegen-0.14)
+ ("rust-serde" ,rust-serde-1)
+ ("rust-serde-derive" ,rust-serde-derive-1)
+ ("rust-serde-json" ,rust-serde-json-1)
+ ("rust-url" ,rust-url-2)
+ ("rust-uuid" ,rust-uuid-0.7))
+ #:cargo-development-inputs
+ (("rust-bencher" ,rust-bencher-0.1)
+ ("rust-serde-json" ,rust-serde-json-1))))
+ (home-page "https://github.com/graphql-rust/juniper")
+ (synopsis "GraphQL server library for Rust")
+ (description
+ "Juniper makes it possible to write GraphQL servers in Rust that are
+type-safe and fast. It also tries to make declaring and resolving GraphQL
+schemas convenient.
+
+Juniper does not include a web server. Instead it provides building blocks to
+make integration with existing servers straightforward. It optionally
+provides a pre-built integration for the Actix, Hyper, Iron, Rocket, and Warp
+frameworks, including embedded Graphiql and GraphQL Playground for easy
+debugging.")
+ (license license:bsd-2)))
+
(define-public rust-keccak-0.1
(package
(name "rust-keccak")
@@ -18317,6 +18632,30 @@ by inspecting the system for user preference.")
`(#:cargo-inputs
(("rust-log" ,rust-log-0.4))))))
+(define-public rust-logtest-2
+ (package
+ (name "rust-logtest")
+ (version "2.0.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "logtest" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "09ihwkq6z7xm6wdwxmc9mz74lsl20g5bi7fcdm8n87bwcnl46gpb"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:tests? #false
+ #:cargo-inputs
+ (("rust-lazy-static" ,rust-lazy-static-1)
+ ("rust-log" ,rust-log-0.4))
+ #:cargo-development-inputs
+ (("rust-kv-log-macro" ,rust-kv-log-macro-1))))
+ (home-page "https://github.com/yoshuawuyts/logtest")
+ (synopsis "Test and assert log statements")
+ (description "This package tests and asserts log statements.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-loom-0.4
(package
(name "rust-loom")
@@ -19135,8 +19474,32 @@ file IO.")
#:cargo-development-inputs
(("rust-tempdir" ,rust-tempdir-0.3))))))
+(define-public rust-memoffset-0.6
+ (package
+ (name "rust-memoffset")
+ (version "0.6.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "memoffset" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "11yxgw330cf8g4wy0fnb20ag8gg1b33fsnfmg2g8z6h5wc444yqm"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-autocfg" ,rust-autocfg-1))))
+ (home-page "https://github.com/Gilnaa/memoffset")
+ (synopsis "C-like offset_of functionality for Rust structs")
+ (description
+ "This package provides C-like @code{offset_of} functionality
+for Rust structs.")
+ (license license:expat)))
+
(define-public rust-memoffset-0.5
(package
+ (inherit rust-memoffset-0.6)
(name "rust-memoffset")
(version "0.5.3")
(source
@@ -19148,19 +19511,12 @@ file IO.")
(sha256
(base32
"1fblqzc25hfaym8m0pj112s66pqq87avvaqm5hp5rskib2w9w63m"))))
- (build-system cargo-build-system)
(arguments
`(#:skip-build? #t
#:cargo-inputs
(("rust-rustc-version" ,rust-rustc-version-0.2))
#:cargo-development-inputs
- (("rust-doc-comment" ,rust-doc-comment-0.3))))
- (home-page "https://github.com/Gilnaa/memoffset")
- (synopsis
- "C-like offset_of functionality for Rust structs")
- (description "This package provides C-like @code{offset_of} functionality
-for Rust structs.")
- (license license:expat)))
+ (("rust-doc-comment" ,rust-doc-comment-0.3))))))
(define-public rust-memoffset-0.2
(package
@@ -21517,6 +21873,62 @@ primitives and enums easier.")
primitives and enums easier.")
(license license:bsd-3)))
+(define-public rust-num-format-0.4
+ (package
+ (name "rust-num-format")
+ (version "0.4.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "num-format" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "0r94i9lhr15hk32494v9my31r0829w29yyp7iql98a1cf9wl3zms"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-arrayvec" ,rust-arrayvec-0.4)
+ ("rust-cfg-if" ,rust-cfg-if-0.1)
+ ("rust-encoding-rs" ,rust-encoding-rs-0.8)
+ ("rust-itoa" ,rust-itoa-0.4)
+ ("rust-lazy-static" ,rust-lazy-static-1)
+ ("rust-libc" ,rust-libc-0.2)
+ ("rust-num-bigint" ,rust-num-bigint-0.2)
+ ("rust-num-format-windows" ,rust-num-format-windows-0.3)
+ ("rust-serde" ,rust-serde-1)
+ ("rust-widestring" ,rust-widestring-0.4)
+ ("rust-winapi" ,rust-winapi-0.3))))
+ (home-page "https://github.com/bcmyers/num-format")
+ (synopsis "Produce string-representations of numbers")
+ (description
+ "This package provides a Rust crate for producing string-representations
+of numbers, formatted according to international standards.")
+ (license (list license:expat license:asl2.0))))
+
+(define-public rust-num-format-windows-0.3
+ (package
+ (name "rust-num-format-windows")
+ (version "0.3.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "num-format-windows" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "1sy5jxrbhv6s28c51ibzi34s8qcjm8b21nf7biray7v1qi89h5sf"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-bindgen" ,rust-bindgen-0.47))))
+ (home-page "https://github.com/bcmyers/num-format/num-format-windows")
+ (synopsis "Helper crate for @code{num-format}")
+ (description
+ "This package provides a helper crate for num-format. Do not use it
+directly.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-num-integer-0.1
(package
(name "rust-num-integer")
@@ -22813,18 +23225,18 @@ unparking.")
(define-public rust-parking-lot-0.11
(package
(name "rust-parking-lot")
- (version "0.11.0")
+ (version "0.11.1")
(source
(origin
(method url-fetch)
(uri (crate-uri "parking_lot" version))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32
- "0cw73942xhxb7a49mp9gkjnlwc8acr30wpfs8zk758icz92ki2d4"))))
+ (base32 "1sqmgaia8zfd5fbnqw2w13ijh7crk3lf9vw4cb52vwlx0an48xvd"))))
(build-system cargo-build-system)
(arguments
- `(#:cargo-inputs
+ `(#:skip-build? #t
+ #:cargo-inputs
(("rust-instant" ,rust-instant-0.1)
("rust-lock-api" ,rust-lock-api-0.4)
("rust-parking-lot-core" ,rust-parking-lot-core-0.8))
@@ -22832,9 +23244,11 @@ unparking.")
(("rust-bincode" ,rust-bincode-1)
("rust-rand" ,rust-rand-0.7))))
(home-page "https://github.com/Amanieu/parking_lot")
- (synopsis "More compact and efficient implementations of the standard synchronization primitives")
- (description "This package provides more compact and efficient
-implementations of the standard synchronization primitives.")
+ (synopsis
+ "Efficient implementations of the standard synchronization primitives")
+ (description
+ "This package provides more compact and efficient implementations
+of the standard synchronization primitives.")
(license (list license:asl2.0 license:expat))))
(define-public rust-parking-lot-0.10
@@ -23080,6 +23494,28 @@ synchronization primitives.")
("rust-winapi" ,rust-winapi-0.3)
("rust-rustc-version" ,rust-rustc-version-0.2))))))
+(define-public rust-parse-zoneinfo-0.3
+ (package
+ (name "rust-parse-zoneinfo")
+ (version "0.3.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "parse-zoneinfo" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "0h8g6jy4kckn2gk8sd5adaws180n1ip65xhzw5jxlq4w8ibg41f7"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-regex" ,rust-regex-1))))
+ (home-page "")
+ (synopsis "Parse zoneinfo files from the IANA database")
+ (description
+ "This packages parses zoneinfo files from the IANA database.")
+ (license license:expat)))
+
(define-public rust-partial-io-0.3
(package
(name "rust-partial-io")
@@ -26077,19 +26513,48 @@ that must be shared-mutable, but merely may use atomic instructions to do so.")
radix.")
(license license:asl2.0)))
+(define-public rust-rand-0.8
+ (package
+ (name "rust-rand")
+ (version "0.8.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "rand" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "07lb17qj02bi17mhqxlmsiyf4g8cmplm6hbiw5hxc900li19nl8q"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-libc" ,rust-libc-0.2)
+ ("rust-log" ,rust-log-0.4)
+ ("rust-packed-simd-2" ,rust-packed-simd-2-0.3)
+ ("rust-rand-chacha" ,rust-rand-chacha-0.3)
+ ("rust-rand-core" ,rust-rand-core-0.6)
+ ("rust-rand-hc" ,rust-rand-hc-0.3)
+ ("rust-serde" ,rust-serde-1))))
+ (home-page "https://crates.io/crates/rand")
+ (synopsis "Random number generators and other randomness functionality")
+ (description
+ "Rand provides utilities to generate random numbers, to convert them to
+useful types and distributions, and some randomness-related algorithms.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-rand-0.7
(package
+ (inherit rust-rand-0.8)
(name "rust-rand")
(version "0.7.3")
(source
- (origin
- (method url-fetch)
- (uri (crate-uri "rand" version))
- (file-name (string-append name "-" version ".crate"))
- (sha256
- (base32
- "00sdaimkbz491qgi6qxkv582yivl32m2jd401kzbn94vsiwicsva"))))
- (build-system cargo-build-system)
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "rand" version))
+ (file-name (string-append name "-" version ".crate"))
+ (sha256
+ (base32
+ "00sdaimkbz491qgi6qxkv582yivl32m2jd401kzbn94vsiwicsva"))))
(arguments
`(#:cargo-inputs
(("rust-getrandom" ,rust-getrandom-0.1)
@@ -26102,14 +26567,7 @@ radix.")
("rust-rand-pcg" ,rust-rand-pcg-0.2))
#:cargo-development-inputs
(("rust-rand-hc" ,rust-rand-hc-0.2)
- ("rust-rand-pcg" ,rust-rand-pcg-0.2))))
- (home-page "https://crates.io/crates/rand")
- (synopsis "Random number generators and other randomness functionality")
- (description
- "Rand provides utilities to generate random numbers, to convert them to
-useful types and distributions, and some randomness-related algorithms.")
- (license (list license:asl2.0
- license:expat))))
+ ("rust-rand-pcg" ,rust-rand-pcg-0.2))))))
(define-public rust-rand-0.6
(package
@@ -26211,8 +26669,32 @@ useful types and distributions, and some randomness-related algorithms.")
(("rust-libc" ,rust-libc-0.2)
("rust-rand" ,rust-rand-0.4))))))
+(define-public rust-rand-chacha-0.3
+ (package
+ (name "rust-rand-chacha")
+ (version "0.3.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "rand_chacha" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "03df2xh5nbdvwr17qm3sviaxa95r8yhm1nil2pr0pqf90p7ka9z1"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-ppv-lite86" ,rust-ppv-lite86-0.2)
+ ("rust-rand-core" ,rust-rand-core-0.6))))
+ (home-page "https://crates.io/crates/rand_chacha")
+ (synopsis "ChaCha random number generator")
+ (description
+ "This package provides the ChaCha random number generator.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-rand-chacha-0.2
(package
+ (inherit rust-rand-chacha-0.3)
(name "rust-rand-chacha")
(version "0.2.2")
(source
@@ -26224,15 +26706,10 @@ useful types and distributions, and some randomness-related algorithms.")
(sha256
(base32
"00il36fkdbsmpr99p9ksmmp6dn1md7rmnwmz0rr77jbrca2yvj7l"))))
- (build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-c2-chacha" ,rust-c2-chacha-0.2)
- ("rust-rand-core" ,rust-rand-core-0.5))))
- (home-page "https://crates.io/crates/rand-chacha")
- (synopsis "ChaCha random number generator")
- (description "ChaCha random number generator.")
- (license (list license:asl2.0 license:expat))))
+ ("rust-rand-core" ,rust-rand-core-0.5))))))
(define-public rust-rand-chacha-0.1
(package
@@ -26253,8 +26730,33 @@ useful types and distributions, and some randomness-related algorithms.")
#:cargo-development-inputs
(("rust-autocfg" ,rust-autocfg-0.1))))))
+(define-public rust-rand-core-0.6
+ (package
+ (name "rust-rand-core")
+ (version "0.6.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "rand_core" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "1rfjrcyaj7blz2nawv2pypm5kqc59p80n6f5pg691399iggxf9n0"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-getrandom" ,rust-getrandom-0.2)
+ ("rust-serde" ,rust-serde-1))))
+ (home-page "https://rust-random.github.io/book")
+ (synopsis "Core random number generator traits and tools")
+ (description
+ "This package provides core random number generator traits and
+tools for implementation.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-rand-core-0.5
(package
+ (inherit rust-rand-core-0.6)
(name "rust-rand-core")
(version "0.5.1")
(source
@@ -26266,17 +26768,10 @@ useful types and distributions, and some randomness-related algorithms.")
(sha256
(base32
"06bdvx08v3rkz451cm7z59xwwqn1rkfh6v9ay77b14f8dwlybgch"))))
- (build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-getrandom" ,rust-getrandom-0.1)
- ("rust-serde" ,rust-serde-1))))
- (home-page "https://crates.io/crates/rand-core")
- (synopsis
- "Core random number generator traits and tools for implementation")
- (description
- "Core random number generator traits and tools for implementation.")
- (license (list license:expat license:asl2.0))))
+ ("rust-serde" ,rust-serde-1))))))
(define-public rust-rand-core-0.4
(package
@@ -26359,8 +26854,32 @@ useful types and distributions, and some randomness-related algorithms.")
"Sampling from random number distributions.")
(license (list license:expat license:asl2.0))))
+(define-public rust-rand-hc-0.3
+ (package
+ (name "rust-rand-hc")
+ (version "0.3.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "rand_hc" version))
+ (file-name
+ (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "0wra6ar22zdjkry9dsq1mg620m4h3qb9s8rfykkz4im4crqfz41i"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-rand-core" ,rust-rand-core-0.6))))
+ (home-page "https://crates.io/crates/rand_hc")
+ (synopsis "HC128 random number generator")
+ (description "This package provides a cryptographically secure random number
+generator that uses the HC-128 algorithm.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-rand-hc-0.2
(package
+ (inherit rust-rand-hc-0.3)
(name "rust-rand-hc")
(version "0.2.0")
(source
@@ -26371,16 +26890,9 @@ useful types and distributions, and some randomness-related algorithms.")
(sha256
(base32
"0g31sqwpmsirdlwr0svnacr4dbqyz339im4ssl9738cjgfpjjcfa"))))
- (build-system cargo-build-system)
(arguments
`(#:cargo-inputs
- (("rust-rand-hc" ,rust-rand-core-0.5))))
- (home-page "https://crates.io/crates/rand_hc")
- (synopsis "HC128 random number generator")
- (description "This package provides a cryptographically secure random number
-generator that uses the HC-128 algorithm.")
- (license (list license:asl2.0
- license:expat))))
+ (("rust-rand-hc" ,rust-rand-core-0.5))))))
(define-public rust-rand-hc-0.1
(package
@@ -26858,21 +27370,19 @@ accessors.")
(define-public rust-rayon-1
(package
(name "rust-rayon")
- (version "1.3.1")
+ (version "1.5.0")
(source
(origin
(method url-fetch)
(uri (crate-uri "rayon" version))
- (file-name
- (string-append name "-" version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32
- "104h6i5lcp9kx8g80jgqf6z7wcqa186q57wj4qzf011xfmb2iw32"))))
+ (base32 "0x2n4zkrm6z3avdfh7zgcwx0wq6hx8332dx89v3j1p7s3448w3cb"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-autocfg" ,rust-autocfg-1)
- ("rust-crossbeam-deque" ,rust-crossbeam-deque-0.7)
+ ("rust-crossbeam-deque" ,rust-crossbeam-deque-0.8)
("rust-either" ,rust-either-1)
("rust-rayon-core" ,rust-rayon-core-1))
#:cargo-development-inputs
@@ -26884,7 +27394,8 @@ accessors.")
(home-page "https://github.com/rayon-rs/rayon")
(synopsis "Simple work-stealing parallelism for Rust")
(description
- "Simple work-stealing parallelism for Rust.")
+ "This package provides a simple work-stealing parallelism for
+Rust.")
(license (list license:asl2.0 license:expat))))
(define-public rust-rayon-0.8
@@ -26913,25 +27424,23 @@ accessors.")
(define-public rust-rayon-core-1
(package
(name "rust-rayon-core")
- (version "1.7.1")
+ (version "1.9.0")
(source
(origin
(method url-fetch)
(uri (crate-uri "rayon-core" version))
- (file-name
- (string-append name "-" version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32
- "101jjwkcfw5jk31695gbdm163iicc2pz349q6l8lwj43j3c1abp9"))))
+ (base32 "0jpsi8zf66xyx4m5f329lpgiql8775vpm6zqm7zn5p11b6n4dcws"))))
(build-system cargo-build-system)
(arguments
- `(;; One of the tests attempts to overflow the stack, but the compiler
- ;; has since gotten smarter and the test became defective.
- #:tests? #f
+ ;; One of the tests attempts to overflow the stack, but the compiler has
+ ;; since gotten smarter and the test became defective.
+ `(#:tests? #f
#:cargo-inputs
- (("rust-crossbeam-deque" ,rust-crossbeam-deque-0.7)
- ("rust-crossbeam-queue" ,rust-crossbeam-queue-0.2)
- ("rust-crossbeam-utils" ,rust-crossbeam-utils-0.7)
+ (("rust-crossbeam-channel" ,rust-crossbeam-channel-0.5)
+ ("rust-crossbeam-deque" ,rust-crossbeam-deque-0.8)
+ ("rust-crossbeam-utils" ,rust-crossbeam-utils-0.8)
("rust-lazy-static" ,rust-lazy-static-1)
("rust-num-cpus" ,rust-num-cpus-1))
#:cargo-development-inputs
@@ -26941,8 +27450,8 @@ accessors.")
("rust-scoped-tls" ,rust-scoped-tls-1))))
(home-page "https://github.com/rayon-rs/rayon")
(synopsis "Core APIs for Rayon")
- (description "Core APIs for Rayon.")
- (license (list license:expat license:asl2.0))))
+ (description "This package provides core APIs for Rayon.")
+ (license (list license:asl2.0 license:expat))))
(define-public rust-rctree-0.3
(package
@@ -27199,15 +27708,14 @@ functionality.")
(define-public rust-regex-1
(package
(name "rust-regex")
- (version "1.4.2")
+ (version "1.4.3")
(source
(origin
(method url-fetch)
(uri (crate-uri "regex" version))
- (file-name
- (string-append name "-" version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32 "172bw2yryv65whn3n5vkww4kgk0bq08lx0zbln8xwia7xl9jrkrq"))))
+ (base32 "12llbg82js69mdl50lav4yn1iqlx71ckb18dww467q99w4wi49fr"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
@@ -27320,21 +27828,20 @@ uses finite automata and guarantees linear time matching on all inputs.")
(define-public rust-regex-syntax-0.6
(package
(name "rust-regex-syntax")
- (version "0.6.21")
+ (version "0.6.22")
(source
(origin
(method url-fetch)
(uri (crate-uri "regex-syntax" version))
- (file-name (string-append name "-" version ".crate"))
+ (file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32 "12d176jkgw9749g07zjxz0n78nyvb2nqx3j4sp5aqyphvji1n61v"))))
+ (base32 "10b56ylil35jkb4nwqxm8hbyx3zq7fws0wpydjln165s8xql3sxm"))))
(build-system cargo-build-system)
(home-page "https://github.com/rust-lang/regex")
(synopsis "Regular expression parser")
(description
"This package provides a regular expression parser.")
- (license (list license:asl2.0
- license:expat))))
+ (license (list license:expat license:asl2.0))))
(define-public rust-regex-syntax-0.5
(package
@@ -27861,6 +28368,25 @@ Rust Language Server.")
(;("rust-serde-bytes" ,rust-serde-bytes-0.10)
("rust-serde-json" ,rust-serde-json-1))))))
+(define-public rust-route-recognizer-0.2
+ (package
+ (name "rust-route-recognizer")
+ (version "0.2.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "route-recognizer" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "17mmnyzg7yr5x84n28y6bll1qn21g11k61p6sgg2fjf0xdshcxsn"))))
+ (build-system cargo-build-system)
+ (home-page "https://github.com/http-rs/route-recognizer")
+ (synopsis "Recognizes URL patterns")
+ (description
+ "This package helps recognizing URL patterns with support for dynamic and
+wildcard segments")
+ (license license:expat)))
+
(define-public rust-rspec-1
(package
(name "rust-rspec")
@@ -29384,7 +29910,7 @@ quickly convert floating point numbers to decimal strings.")
(license (list license:asl2.0
license:expat))))
-(define-public rust-same-file-1.0
+(define-public rust-same-file-1
(package
(name "rust-same-file")
(version "1.0.6")
@@ -29412,7 +29938,7 @@ paths point to the same file.")
(define-public rust-same-file-0.1
(package
- (inherit rust-same-file-1.0)
+ (inherit rust-same-file-1)
(name "rust-same-file")
(version "0.1.3")
(source
@@ -30789,15 +31315,14 @@ for the serde framework.")
(define-public rust-serde-json-1
(package
(name "rust-serde-json")
- (version "1.0.60")
+ (version "1.0.61")
(source
(origin
(method url-fetch)
- (uri (crate-uri "serde-json" version))
+ (uri (crate-uri "serde_json" version))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32
- "0yapc7xxk8dx12691yj0l13008rgvknmc6krvk8jwj7y4x6yh00m"))))
+ (base32 "0nijvxvgcncvd1wbn73zx7q14bdxah0gf2789qd8kdjpa1cv5kjg"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
@@ -31087,32 +31612,28 @@ the application/x-www-form-urlencoded format.")
(define-public rust-serde-yaml-0.8
(package
(name "rust-serde-yaml")
- (version "0.8.11")
+ (version "0.8.15")
(source
(origin
(method url-fetch)
(uri (crate-uri "serde_yaml" version))
- (file-name
- (string-append name "-" version ".tar.gz"))
+ (file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32
- "0d9wdjrlx9gxg80kzc6pvdwz5pwhja2n8n0bxja9vv61kzqif6v9"))))
+ (base32 "17q8rshlq56z6zna7wxhk9pihna3s5qdz8q5niip396lwkvfh6wp"))))
(build-system cargo-build-system)
(arguments
- `(#:skip-build? #t
- #:cargo-inputs
+ `(#:cargo-inputs
(("rust-dtoa" ,rust-dtoa-0.4)
("rust-linked-hash-map" ,rust-linked-hash-map-0.5)
("rust-serde" ,rust-serde-1)
("rust-yaml-rust" ,rust-yaml-rust-0.4))
#:cargo-development-inputs
- (("rust-serde-derive" ,rust-serde-derive-1)
- ("rust-unindent" ,rust-unindent-0.1))))
- (home-page
- "https://github.com/dtolnay/serde-yaml")
+ (("rust-indoc" ,rust-indoc-1)
+ ("rust-serde-derive" ,rust-serde-derive-1))))
+ (home-page "https://github.com/dtolnay/serde-yaml")
(synopsis "YAML support for Serde")
- (description "YAML support for Serde.")
- (license (list license:asl2.0 license:expat))))
+ (description "This package provides YAML support for Serde.")
+ (license (list license:expat license:asl2.0))))
(define-public rust-serial-test-0.5
(package
@@ -32267,6 +32788,30 @@ data type.")
license:expat
license:asl2.0))))
+(define-public rust-slug-0.1
+ (package
+ (name "rust-slug")
+ (version "0.1.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "slug" version))
+ (file-name
+ (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "0wrk0w7mcmnvpmc27fw8dxkip6f6xgwpfgp7mp56yv2bd8p7dg5k"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-deunicode" ,rust-deunicode-0.4))))
+ (home-page "https://github.com/Stebalien/slug-rs")
+ (synopsis "Convert a Unicode string to a slug")
+ (description
+ "This package is a small library for generating slugs from
+Unicode strings.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-sluice-0.5
(package
(name "rust-sluice")
@@ -34490,6 +35035,52 @@ memory all at once.")
"Targeting utilities for compilers and related tools")
(license license:asl2.0)))
+(define-public rust-tectonic-cfg-support-0.1
+ (package
+ (name "rust-tectonic-cfg-support")
+ (version "0.1.2")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "tectonic_cfg_support" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "1jsbk89g4s75cdav6350anls81k3lwaq6imhjb4q2c4cmr24i1cz"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-lazy-static" ,rust-lazy-static-1))))
+ (home-page "https://tectonic-typesetting.github.io/")
+ (synopsis "Support crate for @code{CARGO_CFG_TARGET_*} variables")
+ (description
+ "This package provides a build.rs support crate that helps deal
+with @code{CARGO_CFG_TARGET_*} variables.")
+ (license license:expat)))
+
+(define-public rust-tectonic-xdv-0.1
+ (package
+ (name "rust-tectonic-xdv")
+ (version "0.1.11")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "tectonic_xdv" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "1ibxv32i7dla3iw6s01cagzgdgzhm1mmxwqjv841m6m4r7g57gxj"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-byteorder" ,rust-byteorder-1))))
+ (home-page "https://tectonic-typesetting.github.io/")
+ (synopsis "Decoder for the XDV and SPX file formats")
+ (description
+ "This package provides a decoder for the XDV and SPX file formats
+used by XeTeX and Tectonic.")
+ (license license:expat)))
+
(define-public rust-tempdir-0.3
(package
(name "rust-tempdir")
@@ -34597,6 +35188,42 @@ directories.")
"Compact buffer/string type for zero-copy parsing.")
(license (list license:expat license:asl2.0))))
+(define-public rust-tera-1
+ (package
+ (name "rust-tera")
+ (version "1.6.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "tera" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "1p7qzd8akd4xk4b23dmdrqw9q8061xkl1mar34j3f2glmizapipa"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-chrono" ,rust-chrono-0.4)
+ ("rust-chrono-tz" ,rust-chrono-tz-0.5)
+ ("rust-globwalk" ,rust-globwalk-0.8)
+ ("rust-humansize" ,rust-humansize-1)
+ ("rust-lazy-static" ,rust-lazy-static-1)
+ ("rust-percent-encoding" ,rust-percent-encoding-2)
+ ("rust-pest" ,rust-pest-2)
+ ("rust-pest-derive" ,rust-pest-derive-2)
+ ("rust-rand" ,rust-rand-0.8)
+ ("rust-regex" ,rust-regex-1)
+ ("rust-serde" ,rust-serde-1)
+ ("rust-serde-json" ,rust-serde-json-1)
+ ("rust-slug" ,rust-slug-0.1)
+ ("rust-unic-segment" ,rust-unic-segment-0.9))))
+ (home-page "https://tera.netlify.com/")
+ (synopsis "Template engine based on Jinja2/Django templates")
+ (description
+ "Tera is a template engine inspired by Jinja2 and the Django
+template language.")
+ (license license:expat)))
+
(define-public rust-term-0.6
(package
(name "rust-term")
@@ -38431,6 +39058,148 @@ panic-free alternative to @code{core::fmt}.")
"Unchecked indexing wrapper using regular index syntax.")
(license (list license:asl2.0 license:expat))))
+(define-public rust-unic-char-property-0.9
+ (package
+ (name "rust-unic-char-property")
+ (version "0.9.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "unic-char-property" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "08g21dn3wwix3ycfl0vrbahn0835nv2q3swm8wms0vwvgm07mid8"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-unic-char-range" ,rust-unic-char-range-0.9))))
+ (home-page "https://github.com/open-i18n/rust-unic/")
+ (synopsis "Character property taxonomy, contracts and macros for UNIC")
+ (description
+ "This package provides character property taxonomy, contracts and
+build macros for the Unicode and Internationalization Crates (UNIC)
+project.")
+ (license (list license:expat license:asl2.0))))
+
+(define-public rust-unic-char-range-0.9
+ (package
+ (name "rust-unic-char-range")
+ (version "0.9.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "unic-char-range" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "1g0z7iwvjhqspi6194zsff8vy6i3921hpqcrp3v1813hbwnh5603"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-rayon" ,rust-rayon-1))))
+ (home-page "https://github.com/open-i18n/rust-unic/")
+ (synopsis "Character range and iteration for UNIC")
+ (description
+ "This package provides Unicode character range and iteration for
+the Unicode and Internationalization Crates (UNIC) project.")
+ (license (list license:expat license:asl2.0))))
+
+(define-public rust-unic-common-0.9
+ (package
+ (name "rust-unic-common")
+ (version "0.9.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "unic-common" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "1g1mm954m0zr497dl4kx3vr09yaly290zs33bbl4wrbaba1gzmw0"))))
+ (build-system cargo-build-system)
+ (arguments `(#:skip-build? #t))
+ (home-page "https://github.com/open-i18n/rust-unic/")
+ (synopsis "Common utilities for UNIC")
+ (description
+ "This package provides common utilities for the Unicode and
+Internationalization Crates (UNIC) project.")
+ (license (list license:expat license:asl2.0))))
+
+(define-public rust-unic-segment-0.9
+ (package
+ (name "rust-unic-segment")
+ (version "0.9.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "unic-segment" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "08wgz2q6vrdvmbd23kf9pbg8cyzm5q8hq9spc4blzy2ppqk5vvg4"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-unic-ucd-segment" ,rust-unic-ucd-segment-0.9))))
+ (home-page "https://github.com/open-i18n/rust-unic/")
+ (synopsis "Text segmentation algorithmes for UNIC")
+ (description
+ "This UNIC component implements algorithms from Unicode Standard
+Annex #29 - Unicode Text Segmentation, used for detecting boundaries
+of text element boundaries, such as user-perceived characters (a.k.a.
+grapheme clusters), words, and sentences.")
+ (license (list license:expat license:asl2.0))))
+
+(define-public rust-unic-ucd-segment-0.9
+ (package
+ (name "rust-unic-ucd-segment")
+ (version "0.9.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "unic-ucd-segment" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "0027lczcg0r401g6fnzm2bq9fxhgxvri1nlryhhv8192lqic2y90"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-unic-char-property" ,rust-unic-char-property-0.9)
+ ("rust-unic-char-range" ,rust-unic-char-range-0.9)
+ ("rust-unic-ucd-version" ,rust-unic-ucd-version-0.9))))
+ (home-page "https://github.com/open-i18n/rust-unic/")
+ (synopsis "Segmentation properties for the UNIC Unicode character database")
+ (description
+ "This package provides segmentation properties in the Unicode
+character database for the Unicode and Internationalization
+Crates (UNIC) project.")
+ (license (list license:expat license:asl2.0))))
+
+(define-public rust-unic-ucd-version-0.9
+ (package
+ (name "rust-unic-ucd-version")
+ (version "0.9.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "unic-ucd-version" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1i5hnzpfnxkp4ijfk8kvhpvj84bij575ybqx1b6hyigy6wi2zgcn"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:skip-build? #t
+ #:cargo-inputs
+ (("rust-unic-common" ,rust-unic-common-0.9))))
+ (home-page "https://github.com/open-i18n/rust-unic/")
+ (synopsis "Unicode character database for UNIC")
+ (description
+ "This package provides a Unicode character database for the
+Unicode and Internationalization Crates (UNIC) project.")
+ (license (list license:expat license:asl2.0))))
+
(define-public rust-unicase-2
(package
(name "rust-unicase")
@@ -38631,14 +39400,14 @@ or XID_Continue properties according to Unicode Standard Annex #31.")
(define-public rust-unindent-0.1
(package
(name "rust-unindent")
- (version "0.1.6")
+ (version "0.1.7")
(source
(origin
(method url-fetch)
(uri (crate-uri "unindent" version))
- (file-name (string-append name "-" version ".crate"))
+ (file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32 "0hl9l4w9mhv5qacx7cirm6rarrphw35b5syw2plx13vz884dfhdg"))))
+ (base32 "1is1gmx1l89z426rn3xsi0mii4vhy2imhqmhx8x2pd8mji6y0kpi"))))
(build-system cargo-build-system)
(home-page "https://github.com/dtolnay/indoc")
(synopsis "Remove a column of leading whitespace from a string")
@@ -39523,7 +40292,7 @@ specified across Unix and Windows platforms.")
#:cargo-inputs
(("rust-winapi-util" ,rust-winapi-util-0.1)
("rust-winapi" ,rust-winapi-0.3)
- ("rust-same-file" ,rust-same-file-1.0))))
+ ("rust-same-file" ,rust-same-file-1))))
(home-page "https://github.com/BurntSushi/walkdir")
(synopsis "Recursively walk a directory")
(description "Recursively walk a directory.")
@@ -40334,7 +41103,7 @@ using @code{bindgen}.")
installed executable in cross platforms.")
(license license:expat)))
-(define-public rust-which-2.0
+(define-public rust-which-2
(package
(name "rust-which")
(version "2.0.1")
@@ -40364,7 +41133,7 @@ Locate installed executable in cross platforms.")
(define-public rust-which-1.0
(package
- (inherit rust-which-2.0)
+ (inherit rust-which-2)
(name "rust-which")
(version "1.0.5")
(source
@@ -40879,7 +41648,7 @@ extended attributes.")
"This package provides Rust bindings and wrappers for XCB.")
(license license:expat)))
-(define-public rust-xdg-2.2
+(define-public rust-xdg-2
(package
(name "rust-xdg")
(version "2.2.0")
@@ -41017,25 +41786,24 @@ Read/Write streams as well as low-level in-memory encoding and decoding.")
(define-public rust-yaml-rust-0.4
(package
(name "rust-yaml-rust")
- (version "0.4.4")
+ (version "0.4.5")
(source
(origin
(method url-fetch)
(uri (crate-uri "yaml-rust" version))
(file-name (string-append name "-" version ".tar.gz"))
(sha256
- (base32 "038byay0dxsz6isckviz4qshfpyjqmyvda7pq96i6d53y4ickw1r"))))
+ (base32 "118wbqrr4n6wgk5rjjnlrdlahawlxc1bdsx146mwk8f79in97han"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
(("rust-linked-hash-map" ,rust-linked-hash-map-0.5))
#:cargo-development-inputs
(("rust-quickcheck" ,rust-quickcheck-0.9))))
- (home-page "https://chyh1990.github.io/yaml-rust/")
- (synopsis "The missing YAML 1.2 parser for rust")
- (description
- "The missing YAML 1.2 parser for rust.")
- (license (list license:asl2.0 license:expat))))
+ (home-page "http://chyh1990.github.io/yaml-rust/")
+ (synopsis "YAML 1.2 parser for Rust")
+ (description "This package is a YAML 1.2 parser for Rust.")
+ (license (list license:expat license:asl2.0))))
(define-public rust-yaml-rust-0.3
(package
diff --git a/gnu/packages/cups.scm b/gnu/packages/cups.scm
index c8ca5db1a0..51efee5157 100644
--- a/gnu/packages/cups.scm
+++ b/gnu/packages/cups.scm
@@ -1,11 +1,11 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2015, 2019, 2021 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015, 2016, 2017, 2019 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015, 2016, 2017, 2018 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Danny Milosavljevic <dannym@scratchpost.org>
;;; Copyright © 2017 Leo Famulari <leo@famulari.name>
;;; Copyright © 2017 Mark H Weaver <mhw@netris.org>
-;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017–2020 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2020 Marius Bakke <mbakke@fastmail.com>
;;;
;;; This file is part of GNU Guix.
@@ -47,6 +47,7 @@
#:use-module (gnu packages qt)
#:use-module (gnu packages scanner)
#:use-module (gnu packages tls)
+ #:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)
#:use-module (guix build-system python)
#:use-module (guix download)
@@ -57,6 +58,73 @@
#:use-module (srfi srfi-1)
#:use-module (ice-9 match))
+(define-public brlaser
+ (let ((commit "9d7ddda8383bfc4d205b5e1b49de2b8bcd9137f1")
+ (revision "1"))
+ (package
+ (name "brlaser")
+ (version (git-version "6" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/pdewacht/brlaser")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1drh0nk7amn9a8wykki4l9maqa4vy7vwminypfy1712alwj31nd4"))))
+ (build-system cmake-build-system)
+ (arguments
+ `(#:configure-flags
+ (list (string-append "-DCUPS_DATA_DIR="
+ (assoc-ref %outputs "out")
+ "/share/cups")
+ (string-append "-DCUPS_SERVER_BIN="
+ (assoc-ref %outputs "out")
+ "/lib/cups"))))
+ (inputs
+ `(("ghostscript" ,ghostscript)
+ ("cups" ,cups)
+ ("zlib" ,zlib)))
+ (home-page "https://github.com/pdewacht/brlaser")
+ (synopsis "Brother laser printer driver")
+ (description "Brlaser is a CUPS driver for Brother laser printers. This
+driver is known to work with these printers:
+
+@enumerate
+@item Brother DCP-1510 series
+@item Brother DCP-1600 series
+@item Brother DCP-7030
+@item Brother DCP-7040
+@item Brother DCP-7055
+@item Brother DCP-7055W
+@item Brother DCP-7060D
+@item Brother DCP-7065DN
+@item Brother DCP-7080
+@item Brother DCP-L2500D series
+@item Brother DCP-L2520D series
+@item Brother DCP-L2540DW series
+@item Brother HL-1110 series
+@item Brother HL-1200 series
+@item Brother HL-2030 series
+@item Brother HL-2140 series
+@item Brother HL-2220 series
+@item Brother HL-2270DW series
+@item Brother HL-5030 series
+@item Brother HL-L2300D series
+@item Brother HL-L2320D series
+@item Brother HL-L2340D series
+@item Brother HL-L2360D series
+@item Brother MFC-1910W
+@item Brother MFC-7240
+@item Brother MFC-7360N
+@item Brother MFC-7365DN
+@item Brother MFC-7840W
+@item Brother MFC-L2710DW series
+@item Lenovo M7605D
+@end enumerate")
+ (license license:gpl2+))))
+
(define-public cups-filters
(package
(name "cups-filters")
diff --git a/gnu/packages/databases.scm b/gnu/packages/databases.scm
index 1d12ae6b8e..e24eb20608 100644
--- a/gnu/packages/databases.scm
+++ b/gnu/packages/databases.scm
@@ -23,7 +23,7 @@
;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org>
;;; Copyright © 2017 Adriano Peluso <catonano@gmail.com>
;;; Copyright © 2017 Arun Isaac <arunisaac@systemreboot.net>
-;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017, 2018 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 2017, 2018 Ben Woodcroft <donttrustben@gmail.com>
;;; Copyright © 2017 Rutger Helling <rhelling@mykolab.com>
@@ -46,6 +46,7 @@
;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com>
+;;; Copyright © 2021 Sharlatan Hellseher <sharlatanus@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -85,15 +86,16 @@
#:use-module (gnu packages gettext)
#:use-module (gnu packages glib)
#:use-module (gnu packages gnupg)
- #:use-module (gnu packages guile)
- #:use-module (gnu packages time)
#:use-module (gnu packages golang)
+ #:use-module (gnu packages guile)
#:use-module (gnu packages icu4c)
#:use-module (gnu packages jemalloc)
#:use-module (gnu packages language)
#:use-module (gnu packages libedit)
#:use-module (gnu packages libevent)
#:use-module (gnu packages linux)
+ #:use-module (gnu packages lisp)
+ #:use-module (gnu packages lisp-xyz)
#:use-module (gnu packages logging)
#:use-module (gnu packages man)
#:use-module (gnu packages maths)
@@ -110,8 +112,8 @@
#:use-module (gnu packages protobuf)
#:use-module (gnu packages python)
#:use-module (gnu packages python-crypto)
- #:use-module (gnu packages python-web)
#:use-module (gnu packages python-science)
+ #:use-module (gnu packages python-web)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages rdf)
#:use-module (gnu packages readline)
@@ -124,6 +126,7 @@
#:use-module (gnu packages tcl)
#:use-module (gnu packages terminals)
#:use-module (gnu packages textutils)
+ #:use-module (gnu packages time)
#:use-module (gnu packages tls)
#:use-module (gnu packages valgrind)
#:use-module (gnu packages web)
@@ -1278,6 +1281,89 @@ pictures, sounds, or video.")
(define-public postgresql postgresql-13)
+(define-public pgloader
+ (package
+ (name "pgloader")
+ (version "3.6.2")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/dimitri/pgloader")
+ (commit (string-append "v" version))))
+ (sha256
+ (base32 "06i1jd2za3ih5caj2b4vzlzags5j65vv8dfdbz0ggdrp40wfd5lh"))
+ (file-name (git-file-name name version))))
+ (build-system gnu-build-system)
+ (arguments
+ ;; NOTE: (Sharlatan-20210119T211511+0000) Tests are disabled due to being
+ ;; dependent on Quicklisp, main build target is `pgloader-standalone' which
+ ;; does not require Quicklisp workarounds. There is no `install' target
+ ;; configured in Makefile.
+ `(#:tests? #f
+ #:strip-binaries? #f
+ #:make-flags
+ (list "pgloader-standalone" "BUILDAPP_SBCL=buildapp")
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (add-after 'unpack 'set-home
+ (lambda _
+ (setenv "HOME" "/tmp")
+ #t))
+ (add-after 'unpack 'patch-Makefile
+ (lambda _
+ (substitute* "Makefile"
+ (("--sbcl.*") "--sbcl $(CL) --asdf-path . \\\n"))
+ #t))
+ (replace 'install
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((bin (string-append (assoc-ref outputs "out") "/bin")))
+ (mkdir-p bin)
+ (install-file "build/bin/pgloader" bin))
+ #t)))))
+ (native-inputs
+ `(("buildapp" ,buildapp)
+ ("sbcl" ,sbcl)))
+ (inputs
+ `(("alexandria" ,sbcl-alexandria)
+ ("cl-abnf" ,sbcl-cl-abnf)
+ ("cl-base64" ,sbcl-cl-base64)
+ ("cl-csv" ,sbcl-cl-csv)
+ ("cl-fad" ,sbcl-cl-fad)
+ ("cl-log" ,sbcl-cl-log)
+ ("cl-markdown" ,sbcl-cl-markdown)
+ ("cl-mustache" ,sbcl-cl-mustache)
+ ("cl-ppcre" ,sbcl-cl-ppcre)
+ ("cl-sqlite" ,sbcl-cl-sqlite)
+ ("closer-mop" ,sbcl-closer-mop)
+ ("command-line-arguments" ,sbcl-command-line-arguments)
+ ("db3" ,sbcl-db3)
+ ("drakma" ,sbcl-drakma)
+ ("esrap" ,sbcl-esrap)
+ ("flexi-streams" ,sbcl-flexi-streams)
+ ("ixf" ,sbcl-ixf)
+ ("local-time" ,sbcl-local-time)
+ ("lparallel" ,sbcl-lparallel)
+ ("metabang-bind" ,sbcl-metabang-bind)
+ ("mssql" ,sbcl-mssql)
+ ("postmodern" ,sbcl-postmodern)
+ ("py-configparser" ,sbcl-py-configparser)
+ ("qmynd" ,sbcl-qmynd)
+ ("quri" ,sbcl-quri)
+ ("split-sequence" ,sbcl-split-sequence)
+ ("trivial-backtrace" ,sbcl-trivial-backtrace)
+ ("usocket" ,sbcl-usocket)
+ ("uuid" ,sbcl-uuid)
+ ("yason" ,sbcl-yason)
+ ("zs3" ,sbcl-zs3)))
+ (home-page "https://pgloader.io/")
+ (synopsis "Tool to migrate data to PostgreSQL")
+ (description
+ "@code{pgloader} is a program that can load data or migrate databases from
+CSV, DB3, iXF, SQLite, MS-SQL or MySQL to PostgreSQL.")
+ (license (license:x11-style "file://LICENSE"))))
+
(define-public python-pymysql
(package
(name "python-pymysql")
@@ -2163,14 +2249,14 @@ similar to BerkeleyDB, LevelDB, etc.")
(define-public redis
(package
(name "redis")
- (version "6.0.9")
+ (version "6.0.10")
(source (origin
(method url-fetch)
(uri (string-append "http://download.redis.io/releases/redis-"
version".tar.gz"))
(sha256
(base32
- "1pc6gyiylrcazlc559dp5mxqj733pk9qabnirw4ry3k23kwdqayw"))
+ "1gc529nfh8frk4pynyjlnmzvwa0j9r5cmqwyd7537sywz6abifvr"))
(modules '((guix build utils)))
(snippet
;; Delete bundled jemalloc, as the package will use the libc one
@@ -2215,14 +2301,14 @@ sets, bitmaps and hyperloglogs.")
(define-public kyotocabinet
(package
(name "kyotocabinet")
- (version "1.2.78")
+ (version "1.2.79")
(source (origin
(method url-fetch)
(uri (string-append "https://fallabs.com/kyotocabinet/pkg/"
"kyotocabinet-" version ".tar.gz"))
(sha256
(base32
- "1bxkf9kmcavq9rqridb8mvmrk3hj4447ffi24m2admsbm61n6k29"))))
+ "079ymsahlrijswgwfr2la9yw5h57l752cprhp5dz31iamsj1vyv7"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
@@ -3986,3 +4072,26 @@ The drivers officially supported by @code{libdbi} are:
PostreSQL, SQLite, ODBC and MySQL.")
(home-page "http://soci.sourceforge.net/")
(license license:boost1.0)))
+
+(define-public freetds
+ (package
+ (name "freetds")
+ (version "1.2.18")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://www.freetds.org/files/stable/"
+ "freetds-" version ".tar.gz"))
+ (sha256
+ (base32 "1hspvwxwdd1apadsy2b40dpjik8kfwcvdamvhpg3lnm15n02fb50"))))
+ (build-system gnu-build-system)
+ (arguments
+ ;; NOTE: (Sharlatan-20210110213908+0000) some tests require DB connection,
+ ;; disabled for now.
+ `(#:tests? #f))
+ (home-page "https://www.freetds.org/")
+ (synopsis "Client libraries for MS SQL and Sybase servers")
+ (description
+ "FreeTDS is an implementation of the Tabular DataStream protocol, used for
+connecting to MS SQL and Sybase servers over TCP/IP.")
+ (license license:lgpl2.0+)))
diff --git a/gnu/packages/diffoscope.scm b/gnu/packages/diffoscope.scm
index df29704acf..53cdbd8d84 100644
--- a/gnu/packages/diffoscope.scm
+++ b/gnu/packages/diffoscope.scm
@@ -72,7 +72,7 @@
(define-public diffoscope
(package
(name "diffoscope")
- (version "162")
+ (version "164")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -81,7 +81,7 @@
(file-name (git-file-name name version))
(sha256
(base32
- "02wjjbmdbyqpyizw384j50bc2ar4g5m40amz9q102gqbw6sflwbf"))))
+ "0vjxhz8p0k4y19sl1msrl8x4z3v205rlwj52k5hijv2gn9sqh795"))))
(build-system python-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
diff --git a/gnu/packages/disk.scm b/gnu/packages/disk.scm
index 3cc9601d21..3139063298 100644
--- a/gnu/packages/disk.scm
+++ b/gnu/packages/disk.scm
@@ -304,14 +304,14 @@ tables, and it understands a variety of different formats.")
(define-public gptfdisk
(package
(name "gptfdisk")
- (version "1.0.5")
+ (version "1.0.6")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/gptfdisk/gptfdisk/"
version "/gptfdisk-" version ".tar.gz"))
(sha256
- (base32 "0bybgp30pqxb6x5krxazkq4drca0gz4inxj89fpyr204rn3kjz8f"))))
+ (base32 "1a4c2ss6n2s6x8v11h79jykh96y46apd6i838ka0ngx58gb53ifx"))))
(build-system gnu-build-system)
(inputs
`(("gettext" ,gettext-minimal)
@@ -860,7 +860,7 @@ to create devices with respective mappings for the ATARAID sets discovered.")
(define-public libblockdev
(package
(name "libblockdev")
- (version "2.24")
+ (version "2.25")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/storaged-project/"
@@ -868,7 +868,7 @@ to create devices with respective mappings for the ATARAID sets discovered.")
version "-1/libblockdev-" version ".tar.gz"))
(sha256
(base32
- "0wq7624pnprvfzrf39bq1cybd9lqwawbdg5bm0cchlpgvdq7q86w"))))
+ "0s0nazkpzpn4an00qghjkk9n7gdm5a8dqfr5hfnlk5mk5lma8njm"))))
(build-system gnu-build-system)
(arguments
`(#:phases
diff --git a/gnu/packages/dns.scm b/gnu/packages/dns.scm
index 5bb725ae92..5e65eed7ed 100644
--- a/gnu/packages/dns.scm
+++ b/gnu/packages/dns.scm
@@ -5,7 +5,7 @@
;;; Copyright © 2016, 2017 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 John Darrington <jmd@gnu.org>
;;; Copyright © 2016 Nikita <nikita@n0.is>
-;;; Copyright © 2016, 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2016–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2016, 2020 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2017 Vasile Dumitrascu <va511e@yahoo.com>
;;; Copyright © 2017 Gregor Giesen <giesen@zaehlwerk.net>
@@ -13,7 +13,7 @@
;;; Copyright © 2019 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2019 Chris Marusich <cmmarusich@gmail.com>
;;; Copyright © 2019 Rutger Helling <rhelling@mykolab.com>
-;;; Copyright © 2020 Pierre Langlois <pierre.langlois@gmx.com>
+;;; Copyright © 2020, 2021 Pierre Langlois <pierre.langlois@gmx.com>
;;; Copyright © 2020 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2020 Leo Famulari <leo@famulari.name>
;;; Copyright © 2020 Brice Waegeneire <brice@waegenei.re>
@@ -277,7 +277,7 @@ prompt the user with the option to go with insecure DNS only.")
(define-public dnsmasq
(package
(name "dnsmasq")
- (version "2.82")
+ (version "2.83")
(source (origin
(method url-fetch)
(uri (string-append
@@ -285,7 +285,7 @@ prompt the user with the option to go with insecure DNS only.")
version ".tar.xz"))
(sha256
(base32
- "0cn1xd1s6xs78jmrmwjnh9m6w3q38pk6dyqy2phvasqiyd33cll4"))))
+ "1sjamz1v588qf35m8z6wcqkjk5w12bqhj7d7p48dj8jyn3lgghgz"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
@@ -317,7 +317,7 @@ and BOOTP/TFTP for network booting of diskless machines.")
(package
(name "bind")
;; When updating, check whether isc-dhcp's bundled copy should be as well.
- (version "9.16.10")
+ (version "9.16.11")
(source (origin
(method url-fetch)
(uri (string-append
@@ -325,7 +325,7 @@ and BOOTP/TFTP for network booting of diskless machines.")
"/bind-" version ".tar.xz"))
(sha256
(base32
- "1cv26gzbyk3ahidr1fip0pgj28s7l52cafdqpykfc1b2kh0zqixw"))))
+ "1hcr0q6i2mk83yi12zxjs5q21y3gx7683q99l77ibxfqsx6zc481"))))
(build-system gnu-build-system)
(outputs `("out" "utils"))
(inputs
diff --git a/gnu/packages/docbook.scm b/gnu/packages/docbook.scm
index 236c7e2819..889bb96010 100644
--- a/gnu/packages/docbook.scm
+++ b/gnu/packages/docbook.scm
@@ -4,6 +4,7 @@
;;; Copyright © 2016 Mathieu Lirzin <mthl@gnu.org>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2020 Marius Bakke <marius@gnu.org>
+;;; Copyright © 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -214,6 +215,168 @@ by no means limited to these applications.) This package provides XML DTDs.")
"This package provides XSL style sheets for DocBook.")
(license (x11-style "" "See 'COPYING' file."))))
+(define-public docbook-dsssl
+ (package
+ (name "docbook-dsssl")
+ (version "1.79")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "mirror://sourceforge/docbook/"
+ name "/" version "/"
+ name "-" version ".tar.bz2"))
+ (sha256
+ (base32
+ "1g72y2yyc2k89kzs0lvrb9n7hjayw1hdskfpplpz97pf1c99wcig"))))
+ (build-system trivial-build-system)
+ (outputs '("out" "doc"))
+ (arguments
+ `(#:modules ((guix build utils))
+ #:builder
+ (begin
+ (use-modules (guix build utils))
+ (let ((source (assoc-ref %build-inputs "source"))
+ (dtd (string-append (assoc-ref %outputs "out")
+ "/sgml/dtd/docbook"))
+ (docbook-dsssl-doc (assoc-ref %build-inputs "docbook-dsssl-doc"))
+ (doc (assoc-ref %outputs "doc"))
+ (tar (assoc-ref %build-inputs "tar"))
+ (bzip2 (assoc-ref %build-inputs "bzip2")))
+ (setenv "PATH" (string-append tar "/bin" ":" bzip2 "/bin"))
+ (mkdir-p dtd)
+ (invoke "tar" "-xf" source "-C" dtd)
+ ;; The doc output contains 1.4 MiB of HTML documentation.
+ (symlink docbook-dsssl-doc doc)))))
+ (inputs
+ `(("docbook-dsssl-doc" ,docbook-dsssl-doc)))
+ (native-inputs
+ `(("bzip2", bzip2)
+ ("tar" ,tar)))
+ (home-page "https://docbook.org/")
+ (synopsis "DSSSL style sheets for DocBook")
+ (description "This package provides DSSSL style sheets for DocBook.")
+ (license (non-copyleft "file://README"))))
+
+;;; Private variable, used as the 'doc' output of the docbook-dsssl package.
+(define docbook-dsssl-doc
+ (package
+ (name "docbook-dsssl-doc")
+ (version "1.79")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "mirror://sourceforge/docbook/"
+ name "/" version "/"
+ name "-" version ".tar.bz2"))
+ (sha256
+ (base32
+ "1plp5ngc96pbna4rwglp9glcadnirbm3hlcjb4gjvq1f8biic9lz"))))
+ (build-system trivial-build-system)
+ (arguments
+ `(#:modules ((guix build utils))
+ #:builder
+ (begin
+ (use-modules (guix build utils))
+ (let ((source (assoc-ref %build-inputs "source"))
+ (docdir (string-append (assoc-ref %outputs "out")
+ "/share/doc/" "docbook-dsssl-" ,version))
+ (tar (assoc-ref %build-inputs "tar"))
+ (bzip2 (assoc-ref %build-inputs "bzip2")))
+ (setenv "PATH" (string-append tar "/bin" ":" bzip2 "/bin"))
+ (mkdir-p docdir)
+ ;; Extract the "doc" subdirectory.
+ (invoke "tar" "-xf" source "--strip-components=2"
+ "--no-same-owner" "-C" docdir
+ (string-append "docbook-dsssl-" ,version "/doc"))))))
+ (native-inputs
+ `(("bzip2", bzip2)
+ ("tar" ,tar)))
+ (home-page "https://docbook.org/")
+ (synopsis "DocBook DSSSL style sheets documentation")
+ (description "Documentation for the DocBook DSSSL style sheets.")
+ (license (non-copyleft "file://doc/LEGALNOTICE.htm"))))
+
+(define-public docbook-sgml
+ (package
+ (name "docbook-sgml")
+ (version "4.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://www.oasis-open.org/docbook/sgml/"
+ version "/docbk41.zip"))
+ (sha256
+ (base32
+ "04b3gp4zkh9c5g9kvnywdkdfkcqx3kjc04j4mpkr4xk7lgqgrany"))))
+ (build-system trivial-build-system)
+ (arguments
+ '(#:modules ((guix build utils))
+ #:builder
+ (begin
+ (use-modules (guix build utils))
+ (let ((source (assoc-ref %build-inputs "source"))
+ (iso-entities-dir (string-append
+ (assoc-ref %build-inputs "iso-8879-entities")))
+ (unzip (string-append (assoc-ref %build-inputs "unzip")
+ "/bin/unzip"))
+ (dtd (string-append (assoc-ref %outputs "out")
+ "/sgml/dtd/docbook")))
+ ;; Extract the sources.
+ (mkdir-p dtd)
+ (chdir dtd)
+ (invoke unzip source)
+ ;; Reference the ISO 8879 character entities.
+ ;; e.g. "iso-lat1.gml" --> "<iso-entities-dir>/ISOlat1"
+ (substitute* "docbook.cat"
+ (("(.*ISO 8879.*)\"iso-(.*)\\.gml\"" _ head name)
+ (string-append head "\"" iso-entities-dir "/ISO" name "\"")))))))
+ (native-inputs
+ `(("unzip" ,unzip)))
+ (inputs
+ `(("iso-8879-entities" ,iso-8879-entities)))
+ (home-page "https://docbook.org")
+ (synopsis "DocBook SGML style sheets for document authoring")
+ (description "This package provides SGML style sheets for DocBook.")
+ (license (x11-style "" "See file headers."))))
+
+(define-public docbook-sgml-3.1
+ (package
+ (inherit docbook-sgml)
+ (version "3.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "https://www.oasis-open.org/docbook/sgml/"
+ version "/docbk31.zip"))
+ (sha256
+ (base32
+ "0f25ch7bywwhdxb1qa0hl28mgq1blqdap3rxzamm585rf4kis9i0"))))))
+
+;;; Private package referenced by docbook-sgml.
+(define iso-8879-entities
+ (package
+ (name "iso-8879-entities")
+ (version "0.0") ;no proper version
+ (source (origin
+ (method url-fetch)
+ (uri "http://www.oasis-open.org/cover/ISOEnts.zip")
+ (sha256
+ (base32
+ "1clrkaqnvc1ja4lj8blr0rdlphngkcda3snm7b9jzvcn76d3br6w"))))
+ (build-system trivial-build-system)
+ (arguments
+ '(#:modules ((guix build utils))
+ #:builder
+ (begin
+ (use-modules (guix build utils))
+ (let ((source (assoc-ref %build-inputs "source"))
+ (unzip (string-append (assoc-ref %build-inputs "unzip")
+ "/bin/unzip"))
+ (out (string-append (assoc-ref %outputs "out"))))
+ (invoke unzip source "-d" out)))))
+ (native-inputs `(("unzip" ,unzip)))
+ (home-page "https://www.oasis-open.org/")
+ (synopsis "ISO 8879 character entities")
+ (description "ISO 8879 character entities that are typically used in
+the in DocBook SGML DTDs.")
+ (license (x11-style "" "See file headers."))))
+
(define-public dblatex
(package
(name "dblatex")
diff --git a/gnu/packages/education.scm b/gnu/packages/education.scm
index 07862291a7..13372489f5 100644
--- a/gnu/packages/education.scm
+++ b/gnu/packages/education.scm
@@ -2,8 +2,8 @@
;;; Copyright © 2016 Danny Milosavljevic <dannym@scratchpost.org>
;;; Copyright © 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016 Hartmut Goebel <h.goebel@crazy-compilers.com>
-;;; Copyright © 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017, 2018, 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018, 2019, 2020 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2020 Robert Smith <robertsmith@posteo.net>
;;; Copyright © 2020 Guy Fleury Iteriteka <gfleury@disroot.org>
@@ -230,8 +230,11 @@ Currently available boards include:
(sha256
(base32
"0d387b404j88gsv6kv0rb7wxr23v5g5vl6s5l7602x8pxf7slbbx"))
+ ;; Apply patches in the order determined by Debian
(patches (search-patches "tipp10-fix-compiling.patch"
- "tipp10-remove-license-code.patch"))))
+ "tipp10-remove-license-code.patch"
+ "tipp10-disable-downloader.patch"
+ "tipp10-qt5.patch"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ; packages has no tests
@@ -256,8 +259,8 @@ Currently available boards include:
;; Recreate Makefile
(invoke "qmake")))))))
(inputs
- `(("qt4" ,qt-4)
- ("sqlite" ,sqlite)))
+ `(("qtbase" ,qtbase)
+ ("qtmultimedia" ,qtmultimedia)))
(home-page "https://www.tipp10.com/")
(synopsis "Touch typing tutor")
(description "Tipp10 is a touch typing tutor. The ingenious thing about
@@ -677,15 +680,14 @@ language and very flexible regarding to new or unknown keyboard layouts.")
(define-public ktouch
(package
(name "ktouch")
- (version "20.12.0")
+ (version "20.12.1")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://kde/stable/release-service/"
version "/src/ktouch-" version ".tar.xz"))
(sha256
- (base32
- "1s8pcwakx94aygfyjmyps5b43j4kv6dmfw7n12japcka2yfp9bi2"))))
+ (base32 "10lm2p8w26c9n6lhvw3301myfss0dq7hl7rawzb3hsy1lqvmvdib"))))
(build-system qt-build-system)
(arguments
`(#:phases
diff --git a/gnu/packages/efi.scm b/gnu/packages/efi.scm
index 12cadd6036..11cfe586ac 100644
--- a/gnu/packages/efi.scm
+++ b/gnu/packages/efi.scm
@@ -1,7 +1,8 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2019 Danny Milosavljevic <dannym@scratchpost.org>
;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il>
-;;; Copyright © 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2019–2021 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2021 Vincent Legoll <vincent.legoll@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -61,6 +62,44 @@ environment presented by Intel's EFI.")
;; Distribution is allowed only when accepting all those licenses.
(license (list license:bsd-2 license:bsd-3 license:bsd-4 license:expat))))
+(define-public efi-analyzer
+ (let ((commit "77c9e3a67cd7c2fca48a4292dad25a5429872f95")
+ (revision "0"))
+ (package
+ (name "efi-analyzer")
+ (version (git-version "0.0.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/xypron/efi_analyzer")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1izdkzybqyvzpzqz6kx4j7y47j6aa2dsdrychzgs65466x1a4br1"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:make-flags
+ (list (string-append "prefix=" (assoc-ref %outputs "out")))
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'support-cross-compilation
+ (lambda _
+ (substitute* "Makefile"
+ (("gcc") ,(cc-for-target)))
+ #t))
+ (delete 'configure)))) ; no configure script
+ (home-page "https://github.com/xypron/efi_analyzer")
+ (synopsis "Analyze EFI binaries")
+ (description
+ "The EFI Analyzer checks EFI binaries and prints out header and section
+information.")
+ (license license:bsd-2))))
+
+(define-public efi_analyzer
+ ;; For a short while the package name contained an underscore.
+ (deprecated-package "efi_analyzer" efi-analyzer))
+
(define-public sbsigntools
(package
(name "sbsigntools")
diff --git a/gnu/packages/elf.scm b/gnu/packages/elf.scm
index e5ce481fa8..2e21cab48d 100644
--- a/gnu/packages/elf.scm
+++ b/gnu/packages/elf.scm
@@ -122,14 +122,14 @@ object or archive file), @command{eu-strip} (for discarding symbols),
(package
(name "libabigail")
(home-page "https://sourceware.org/libabigail/")
- (version "1.7")
+ (version "1.8")
(source (origin
(method url-fetch)
(uri (string-append "https://sourceware.org/pub/libabigail/"
"libabigail-" version ".tar.gz"))
(sha256
(base32
- "0bf8w01l6wm7mm4clfg5rqi30m1ws11qqa4bp2vxghfwgi9ai8i7"))))
+ "0p363mkgypcklgf8iylxpbdnfgqc086a6fv7n9hzrjjci45jdgqw"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--disable-static"
diff --git a/gnu/packages/elixir.scm b/gnu/packages/elixir.scm
index 8a2b6b302c..389b2bb29c 100644
--- a/gnu/packages/elixir.scm
+++ b/gnu/packages/elixir.scm
@@ -5,6 +5,7 @@
;;; Copyright © 2017 nee <nee.git@cock.li>
;;; Copyright © 2018, 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Nikita <nikita@n0.is>
+;;; Copyright © 2021 Oskar Köök <oskar@maatriks.ee>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -33,7 +34,7 @@
(define-public elixir
(package
(name "elixir")
- (version "1.10.4")
+ (version "1.11.3")
(source
(origin
(method git-fetch)
@@ -42,7 +43,7 @@
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "16j4rmm3ix088fvxhvyjqf1hnfg7wiwa87gml3b2mrwirdycbinv"))
+ (base32 "0ivah4117z75pinvb3gr22d05ihfwcdgw5zvvpv7kbgiqaj8ma8f"))
(patches (search-patches "elixir-path-length.patch"))))
(build-system gnu-build-system)
(arguments
diff --git a/gnu/packages/emacs-xyz.scm b/gnu/packages/emacs-xyz.scm
index 81ae90ea31..9e276d9d26 100644
--- a/gnu/packages/emacs-xyz.scm
+++ b/gnu/packages/emacs-xyz.scm
@@ -31,7 +31,7 @@
;;; Copyright © 2017 Peter Mikkelsen <petermikkelsen10@gmail.com>
;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Mike Gerwitz <mtg@gnu.org>
-;;; Copyright © 2017, 2018, 2019, 2020 Maxim Cournoyer <maxim.cournoyer@gmail.com>
+;;; Copyright © 2017, 2018, 2019, 2020, 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2018 Sohom Bhattacharjee <soham.bhattacharjee15@gmail.com>
;;; Copyright © 2018, 2019 Mathieu Lirzin <mthl@gnu.org>
;;; Copyright © 2018, 2019, 2020, 2021 Pierre Neidhardt <mail@ambrevar.xyz>
@@ -41,7 +41,7 @@
;;; Copyright © 2018 Alex Branham <alex.branham@gmail.com>
;;; Copyright © 2018 Thorsten Wilms <t_w_@freenet.de>
;;; Copyright © 2018, 2019, 2020 Pierre Langlois <pierre.langlois@gmx.com>
-;;; Copyright © 2018, 2019, 2020 Brett Gilio <brettg@gnu.org>
+;;; Copyright © 2018, 2019, 2020, 2021 Brett Gilio <brettg@gnu.org>
;;; Copyright © 2019, 2020 Dimakakos Dimos <bendersteed@teknik.io>
;;; Copyright © 2019, 2020 Brian Leung <bkleung89@gmail.com>
;;; Copyright © 2019 mikadoZero <mikadozero@yandex.com>
@@ -88,7 +88,8 @@
;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
;;; Copyright © 2020 André A. Gomes <andremegafone@gmail.com>
;;; Copyright © 2020 Jonathan Rostran <rostranjj@gmail.com>
-;;; Copyright © 2020 Noah Evans <noah@nevans.me>
+;;; Copyright © 2020, 2021 Noah Evans <noah@nevans.me>
+;;; Copyright © 2020 Brit Butler <brit@kingcons.io>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -130,6 +131,7 @@
#:use-module (gnu packages databases)
#:use-module (gnu packages dictionaries)
#:use-module (gnu packages djvu)
+ #:use-module (gnu packages ebook)
#:use-module (gnu packages emacs)
#:use-module (gnu packages guile)
#:use-module (gnu packages gtk)
@@ -1844,6 +1846,34 @@ like. It can be linked with various Emacs mail clients (Message and Mail
mode, Rmail, Gnus, MH-E, and VM). BBDB is fully customizable.")
(license license:gpl3+)))
+(define-public emacs-counsel-bbdb
+ (package
+ (name "emacs-counsel-bbdb")
+ (version "20181128.1320")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://melpa.org/packages/counsel-bbdb-"
+ version ".el"))
+ (sha256
+ (base32
+ "03g3lk8hz9a17vf5r16x054bhyk8xsbnfq0div8ig13fmhqi159q"))))
+ (build-system emacs-build-system)
+ (propagated-inputs `(("emacs-ivy" ,emacs-ivy)))
+ (home-page "https://github.com/redguard/counsel-bbdb")
+ (synopsis "Ivy interface for BBDB")
+ (description "This Ivy extension enables the use of @code{ivy-mode} to input
+email addresses from BBDB efficiently. The main functions are:
+@table @code
+@item counsel-bbdb-complete-mail to input email addresses;
+@item counsel-bbdb-reload' to reload contacts from BBDB database;
+@item counsel-bbdb-expand-mail-alias to expand mail alias.
+@end table
+Since @code{counsel-bbdb} is based on @code{ivy-mode}, all Ivy key bindings
+are supported. For example, after @samp{C-u M-x counsel-bbdb-complete-mail},
+you can press @samp{C-M-n} to input multiple email addresses.")
+ (license license:gpl3+)))
+
(define-public emacs-bluetooth
(package
(name "emacs-bluetooth")
@@ -2071,14 +2101,14 @@ as a library for other Emacs packages.")
(define-public emacs-auctex
(package
(name "emacs-auctex")
- (version "13.0.3")
+ (version "13.0.4")
(source
(origin
(method url-fetch)
(uri (string-append "https://elpa.gnu.org/packages/"
"auctex-" version ".tar"))
(sha256
- (base32 "1ljpkr0z15fyh907jbgky238dvci5vqi3xhvslyhblhp8sg9cbsi"))))
+ (base32 "1362dqb8mcaddda9849gqsj6rzlfq18xprddb74j02884xl7hq65"))))
(build-system emacs-build-system)
;; We use 'emacs' because AUCTeX requires dbus at compile time
;; ('emacs-minimal' does not provide dbus).
@@ -2253,7 +2283,7 @@ Lock key.")
(define-public emacs-chronometrist
(package
(name "emacs-chronometrist")
- (version "0.5.6")
+ (version "0.6.3")
(source
(origin
(method git-fetch)
@@ -2262,7 +2292,7 @@ Lock key.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "0g54pxvid1hlynlnfx99sl027q2mr2f4axsvnf0vb3v48zm0n5cw"))))
+ (base32 "0ql72qh0bshv62nksv6awz5nqfhmgs8hkyvm7wvzfq64yrwghw50"))))
(build-system emacs-build-system)
(arguments
`(#:phases
@@ -4664,18 +4694,19 @@ for Flow files.")
(define-public emacs-flycheck-grammalecte
(package
(name "emacs-flycheck-grammalecte")
- (version "1.2")
+ (version "1.3")
(source
(origin
- (method url-fetch)
- (uri (string-append "https://git.deparis.io/"
- "flycheck-grammalecte/snapshot/"
- "flycheck-grammalecte-" version ".tar.xz"))
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://git.umaneti.net/flycheck-grammalecte/")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
- (base32 "1mzmzyik843r4j0ibpwqrxmb0g4xmirrf3lxr010bddkmmxf749a"))))
+ (base32 "1f1gapvs9j89qr474103dqgsiyb96phlnsmq5hiv4ba242blg9lb"))))
(build-system emacs-build-system)
(arguments
- `(#:include '("\\.(el|py)$")
+ `(#:include (cons "\\.py$" %default-include)
#:exclude '("^test-profile.el$")
#:emacs ,emacs ;need libxml support
#:phases
@@ -4690,28 +4721,22 @@ for Flow files.")
(substitute* '("conjugueur.py" "flycheck-grammalecte.py")
(("/usr/bin/env python3?") python3))
#t)))
- (add-before 'build 'link-to-grammalecte
- ;; XXX: The Python part of the package requires grammalecte, but
- ;; the library is not specified in PYTHONPATH, since we're not
- ;; using Python build system. As a workaround, we symlink
- ;; grammalecte libraries here.
- (lambda* (#:key inputs outputs #:allow-other-keys)
- (let* ((out (assoc-ref outputs "out"))
- (grammalecte (assoc-ref inputs "grammalecte"))
- (version ,(version-major+minor (package-version python))))
- (with-directory-excursion
- (string-append out "/share/emacs/site-lisp")
- (symlink (string-append grammalecte "/lib/"
- "python" version "/site-packages/"
- "grammalecte")
- "grammalecte"))
- #t))))))
+ (add-after 'unpack 'specify-grammalecte-location
+ (lambda* (#:key inputs #:allow-other-keys)
+ (make-file-writable "flycheck-grammalecte.el")
+ (emacs-substitute-variables "flycheck-grammalecte.el"
+ ("flycheck-grammalecte--grammalecte-directory"
+ (string-append (assoc-ref inputs "grammalecte")
+ "/lib/python"
+ ,(version-major+minor (package-version python))
+ "/site-packages/grammalecte")))
+ #t)))))
(inputs
`(("grammalecte" ,grammalecte)
("python" ,python)))
(propagated-inputs
`(("emacs-flycheck" ,emacs-flycheck)))
- (home-page "https://git.deparis.io/flycheck-grammalecte/")
+ (home-page "https://git.umaneti.net/flycheck-grammalecte/")
(synopsis "Integrate Grammalecte with Flycheck")
(description
"Integrate the French grammar and typography checker Grammalecte with
@@ -6344,6 +6369,57 @@ drill sessions to aid in memorization. In these sessions you are shown flash
cards created in Org mode.")
(license license:gpl3+)))
+(define-public emacs-anki-editor
+ ;; Last release was in 2018.
+ (let ((commit "546774a453ef4617b1bcb0d1626e415c67cc88df")
+ (revision "0")
+ (version "0.3.3"))
+ (package
+ (name "emacs-anki-editor")
+ (version (git-version version revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/louietan/anki-editor")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1if610hq5j8rbjh1caw5bwbgnsn231awwxqbpwvrh966kdxzl4qf"))))
+ (build-system emacs-build-system)
+ (propagated-inputs
+ `(("emacs-dash" ,emacs-dash)
+ ("emacs-request" ,emacs-request)))
+ (home-page "https://github.com/louietan/anki-editor")
+ (synopsis "Minor mode for making Anki cards with Org mode")
+ (description
+ "This package is for people who use Anki as a spaced repetition system
+(SRS) but would like to make cards in Org mode.")
+ (license license:gpl3+))))
+
+(define-public emacs-org-mime
+ (package
+ (name "emacs-org-mime")
+ (version "0.2.1")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/org-mime/org-mime")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0vchyd80ybvr6317dwm50nxcgxfrpc0bz6259vnrh24p5sb8shbj"))))
+ (build-system emacs-build-system)
+ (home-page "http://github.com/org-mime/org-mime")
+ (synopsis "Send HTML email using Org mode HTML export")
+ (description
+ "This program sends HTML email using Org-mode HTML export.
+This approximates a WYSiWYG HTML mail editor from within Emacs, and can be
+useful for sending tables, fontified source code, and inline images in
+email.")
+ (license license:gpl3+)))
+
(define-public emacs-org-superstar
(package
(name "emacs-org-superstar")
@@ -6983,6 +7059,60 @@ any one of several ways: literally, as a regexp, as an initialism, in the flex
style, or as multiple word prefixes.")
(license license:gpl3+)))
+(define-public emacs-consult
+ ;; There are no tagged releases upstream on GitHub, instead we are using the
+ ;; most recent commit.
+ (let ((commit "ef6bb73a4a46e686826968fa25169e2d59b9a087")
+ (revision "0"))
+ (package
+ (name "emacs-consult")
+ (version (git-version "0.1" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/minad/consult")
+ (commit commit)))
+ (sha256
+ (base32 "00cnwg2knd820wwx6zg71rr0whpdhqm64gm3qx1mgklk79g7daih"))
+ (file-name (git-file-name name version))))
+ (build-system emacs-build-system)
+ (propagated-inputs `(("emacs-flycheck" ,emacs-flycheck)
+ ("emacs-selectrum" ,emacs-selectrum)))
+ (home-page "https://github.com/minad/consult")
+ (synopsis "Consulting completing-read")
+ (description "This package provides various handy commands based on the
+Emacs completion function completing-read, which allows to quickly select from a
+list of candidates.")
+ (license license:gpl3+))))
+
+(define-public emacs-marginalia
+ ;; There are no tagged releases upstream on GitHub, instead we are using the
+ ;; most recent commit.
+ (let ((commit "401993562dbf636054dd64988e44d19b5030867f")
+ (revision "0"))
+ (package
+ (name "emacs-marginalia")
+ (version (git-version "0.1" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/minad/marginalia")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1j0k9ija5paidj7yvbagkkayz9bjwhia9yhmd2q4490ginbbxshs"))))
+ (build-system emacs-build-system)
+ (home-page "https://github.com/minad/marginalia")
+ (synopsis "Marginalia in the minibuffer")
+ (description
+ "This package provides Marginalia mode which adds marginalia to the
+minibuffer completions. Marginalia are marks or annotations placed at the
+margin of the page of a book or in this case helpful colorful annotations
+placed at the margin of the minibuffer for your completion candidates.")
+ (license license:gpl3+))))
+
(define-public emacs-smartparens
(package
(name "emacs-smartparens")
@@ -9923,8 +10053,8 @@ extensions.")
(license license:gpl3+)))
(define-public emacs-evil-collection
- (let ((commit "8c256263ad100fecd6246c6c55cbb19dab717c39")
- (revision "18"))
+ (let ((commit "323bb7d85848a6a142ae14f39c3a073ce6423e20")
+ (revision "19"))
(package
(name "emacs-evil-collection")
(version (git-version "0.0.3" revision commit))
@@ -9936,7 +10066,7 @@ extensions.")
(file-name (git-file-name name version))
(sha256
(base32
- "0hz1yfv5g016dm99bwnibbmyhbi21qlc39ckd7p3s82az89hgf2n"))))
+ "1pf51kj93i1k2ivkjgwcvgxj8shrl8h7rkg578jl4k4awargf0nz"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-evil" ,emacs-evil)
@@ -9976,9 +10106,9 @@ being deleted, changed, yanked, or pasted when using evil commands")
(license license:gpl3+))))
(define-public emacs-goto-chg
- (let ((commit "1829a13026c597e358f716d2c7793202458120b5")
+ (let ((commit "2af612153bc9f5bed135d25abe62f46ddaa9027f")
(version "1.7.3")
- (revision "1"))
+ (revision "2"))
(package
(name "emacs-goto-chg")
(version (git-version version revision commit))
@@ -9991,10 +10121,8 @@ being deleted, changed, yanked, or pasted when using evil commands")
(file-name (git-file-name name version))
(sha256
(base32
- "1y603maw9xwdj3qiarmf1bp13461f9f5ackzicsbynl0i9la3qki"))))
+ "1awmvihqgw6kspx192bcp9xp56xqbma90wlhxfxmidx3bvxghwpv"))))
(build-system emacs-build-system)
- (propagated-inputs
- `(("emacs-undo-tree" ,emacs-undo-tree)))
(home-page "https://github.com/emacs-evil/goto-chg")
(synopsis "Go to the last change in the Emacs buffer")
(description
@@ -11575,14 +11703,14 @@ information via a consistent and well-integrated user interface.")
(define-public emacs-adaptive-wrap
(package
(name "emacs-adaptive-wrap")
- (version "0.7")
+ (version "0.8")
(source
(origin
(method url-fetch)
(uri (string-append "https://elpa.gnu.org/packages/"
"adaptive-wrap-" version ".el"))
(sha256
- (base32 "10fb8gzvkbnrgzv28n1rczs03dvapr7rvi0kd73j6yf1zg2iz6qp"))))
+ (base32 "1gs1pqzywvvw4prj63vpj8abh8h14pjky11xfl23pgpk9l3ldrb0"))))
(build-system emacs-build-system)
(home-page "https://elpa.gnu.org/packages/adaptive-wrap.html")
(synopsis "Smart line-wrapping with wrap-prefix")
@@ -12031,14 +12159,14 @@ and cangjie.")
(define-public emacs-posframe
(package
(name "emacs-posframe")
- (version "0.8.3")
+ (version "0.8.4")
(source
(origin
(method url-fetch)
(uri (string-append "https://elpa.gnu.org/packages/"
- "posframe-" version ".el"))
+ "posframe-" version ".tar"))
(sha256
- (base32 "05m56aw2yxik0pgcvyr5c92j2mwfksxgq1syzvik6161gy8hdd0g"))))
+ (base32 "1sn35ibp5y4y80l1xm4b8i94ld953a9gbkk99zqd9mrq9bwjyhdp"))))
(build-system emacs-build-system)
;; emacs-minimal does not include the function font-info.
(arguments
@@ -12766,6 +12894,29 @@ JSONRPC is a generic Remote Procedure Call protocol designed around
JSON objects.")
(license license:gpl3+)))
+(define-public emacs-jsonnet-mode
+ (package
+ (name "emacs-jsonnet-mode")
+ (version "0.1.2")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/tminor/jsonnet-mode")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "0vi7415n90d1z2ww1hld0gdp6v7z4rd6f70h476dp2x4hydk293i"))))
+ (build-system emacs-build-system)
+ (propagated-inputs
+ `(("emacs-dash" ,emacs-dash)))
+ (home-page "https://github.com/mgyucht/jsonnet-mode")
+ (synopsis "Major mode for editing jsonnet files")
+ (description "This package provides syntax highlighting, indenting,
+formatting, and utility methods for jsonnet files.")
+ (license license:gpl3+)))
+
(define-public emacs-restclient
(let ((commit "ac8aad6c6b9e9d918062fa3c89c22c2f4ec48bc3")
(version "0")
@@ -12879,8 +13030,8 @@ the actual transformations.")
(license license:gpl2+))))
(define-public emacs-dired-hacks
- (let ((commit "886befe113fae397407c804f72c45613d1d43535")
- (revision "2"))
+ (let ((commit "d1a2bda6aa8f890cb367297ed93aee6d3b5ba388")
+ (revision "3"))
(package
(name "emacs-dired-hacks")
(version (git-version "0.0.1" revision commit))
@@ -12892,7 +13043,7 @@ the actual transformations.")
(file-name (git-file-name name version))
(sha256
(base32
- "1cvibg90ggyrivpjmcfprpi2fx7dpa68f8kzg08s88gw5ib75djl"))))
+ "12m81a9kjhs4cyq3lym0vp5nx6z3sfnypyzrnia76x6rjvixjf6y"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-dash" ,emacs-dash)
@@ -13512,14 +13663,14 @@ database of references on life sciences.")
(define-public emacs-websocket
(package
(name "emacs-websocket")
- (version "1.13")
+ (version "1.13.1")
(source
(origin
(method url-fetch)
(uri (string-append "https://elpa.gnu.org/packages/"
"websocket-" version ".tar"))
(sha256
- (base32 "0jnarx53csmx5fivzp5vhvvj3m8s03zwc6hjl0spz5zb6icqclsa"))))
+ (base32 "1x664zswas0fpml7zaj59zy97avrm49zb80zd69rlkqzz1m45psc"))))
(build-system emacs-build-system)
(home-page "https://elpa.gnu.org/packages/websocket.html")
(synopsis "Emacs WebSocket client and server")
@@ -13667,6 +13818,36 @@ through them using @key{C-c C-SPC}.")
messaging service.")
(license license:gpl3+))))
+(define-public emacs-helm-slack
+ (let ((commit "465f6220f3f5bee4d95492991fca1290c89534eb")
+ (revision "1"))
+ (package
+ (name "emacs-helm-slack")
+ (version (git-version "0" revision commit))
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/yuya373/helm-slack")
+ (commit commit)))
+ (file-name (git-file-name name commit))
+ (sha256
+ (base32
+ "0p1s1kl8v68qjprqkf034cz911qzbqxbscqgpn0c3mbm3yfx81f7"))))
+ (build-system emacs-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ ;; HOME needs to exist for source compilation.
+ (add-before 'build 'set-HOME
+ (lambda _ (setenv "HOME" "/tmp") #t)))))
+ (propagated-inputs `(("emacs-slack", emacs-slack)))
+ (home-page "https://github.com/yuya373/helm-slack")
+ (synopsis "Helm extension for emacs-slack")
+ (description "This package provides an helm extension for emacs-slack
+Slack client.")
+ (license license:gpl3+))))
+
+
(define-public emacs-bash-completion
(package
(name "emacs-bash-completion")
@@ -13949,7 +14130,7 @@ Features:
(define-public emacs-evil-matchit
(package
(name "emacs-evil-matchit")
- (version "2.3.9")
+ (version "2.3.10")
(source
(origin
(method git-fetch)
@@ -13958,7 +14139,7 @@ Features:
(commit version)))
(file-name (git-file-name name version))
(sha256
- (base32 "1jk5qkqz3c4fnh6d2y889k5ycz8ipbkmzk4i8bl86xv9rhis1pv9"))))
+ (base32 "14nrc46290q54y7wv25251f2kqc0z8i9byl09xkgjijqldl9vdxa"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-evil" ,emacs-evil)))
@@ -16073,6 +16254,32 @@ dumb text search, @code{elisp-refs} actually parses the code, so it's never
confused by comments or @code{foo-bar} matching @code{foo}.")
(license license:gpl3+)))
+(define-public emacs-crdt
+ (let ((commit "44068ae505adf2c3a7bdbf6723a25fc45d6d1666")
+ (revision "0"))
+ (package
+ (name "emacs-crdt")
+ (version (git-version "0.0.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://code.librehq.com/qhong/crdt.el")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "130fkhvi757pfnbz70g6nw2n71k89cwwx7yzvsd5v177228c8w7w"))))
+ (build-system emacs-build-system)
+ (home-page "https://code.librehq.com/qhong/crdt.el")
+ (synopsis "Real-time collaborative editing environment")
+ (description
+ "@code{crdt.el} is a real-time collaborative editing environment for
+Emacs using Conflict-free Replicated Data Types. With it, you can share
+multiple buffer in one session, and see other users’ cursor and region. It
+also synchronizes Org mode folding status. It should work with all of Org
+mode.")
+ (license license:gpl3+))))
+
(define-public emacs-crux
(let ((commit "308f17d914e2cd79cbc809de66d02b03ceb82859")
(revision "2"))
@@ -18134,16 +18341,16 @@ appropriate directory if no @code{eshell} session is active.")
(define-public emacs-eshell-syntax-highlighting
(package
(name "emacs-eshell-syntax-highlighting")
- (version "0.2")
+ (version "0.3")
(source
(origin
(method git-fetch)
(uri (git-reference
(url "https://github.com/akreisher/eshell-syntax-highlighting")
- (commit version)))
+ (commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "0id27874wsb5y169030x8g1ldpa1mnskv1s2j3ygqiyh5fvpfash"))))
+ (base32 "1fb9aa85a3hx1rcmv71j6sc3y278452p1y4dabpwy07avb6apd0p"))))
(build-system emacs-build-system)
(home-page "https://github.com/akreisher/eshell-syntax-highlighting")
(synopsis "Add syntax highlighting to Eshell")
@@ -20083,7 +20290,7 @@ correctly.")
(define-public emacs-helm-sly
(package
(name "emacs-helm-sly")
- (version "0.5.1")
+ (version "0.7.0")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -20092,7 +20299,7 @@ correctly.")
(file-name (git-file-name name version))
(sha256
(base32
- "13s2dj09mcdwlibjlahyyq2dxjkjlpxs88dbdyvcd64249jmahsx"))))
+ "090vq8c4scf9byn8xic71b02n4c8frhz1y1x1brxn6iar44dmzm5"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-helm" ,emacs-helm)
@@ -20957,6 +21164,25 @@ with emacs. It displays the output of the @code{repo status} command in a
buffer and launches Magit from the status buffer for the project at point.")
(license license:gpl3+)))
+(define-public emacs-repology
+ (package
+ (name "emacs-repology")
+ (version "1.0.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://elpa.gnu.org/packages/"
+ "repology-" version ".tar"))
+ (sha256
+ (base32 "0y12496wafx95izah8vvv1x86k1m8kysm5mlhvshkp0zbpvmb5iq"))))
+ (build-system emacs-build-system)
+ (home-page "https://elpa.gnu.org/packages/repology.html")
+ (synopsis "Repology API access via Elisp")
+ (description
+ "This package provides tools to query Repology API (see
+@url{https://repology.org/api}), process results, and display them.")
+ (license license:gpl3+)))
+
(define-public emacs-alect-themes
(package
(name "emacs-alect-themes")
@@ -22583,6 +22809,21 @@ through Dash docsets.")
(sha256
(base32 "19gc05k2p1l8wlkrqij9cw6d61hzknd6a9n64kzlpi87cpbav3lv"))))
(build-system emacs-build-system)
+ (arguments
+ '(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'patch-paths
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((calibre (assoc-ref inputs "calibre")))
+ (make-file-writable "calibredb-core.el")
+ (emacs-substitute-variables "calibredb-core.el"
+ ("calibredb-program"
+ (string-append calibre "/bin/calibredb"))
+ ("calibredb-fetch-metadata-program"
+ (string-append calibre "/bin/fetch-ebook-metadata"))))
+ #t)))))
+ (inputs
+ `(("calibre" ,calibre)))
(propagated-inputs
`(("emacs-dash" ,emacs-dash)
("emacs-s" ,emacs-s)
@@ -24902,7 +25143,7 @@ pattern guessed from thing under current cursor position.
(define-public emacs-helm-selector
(package
(name "emacs-helm-selector")
- (version "0.5")
+ (version "0.6.1")
(home-page "https://github.com/emacs-helm/helm-selector")
(source
(origin
@@ -24913,7 +25154,7 @@ pattern guessed from thing under current cursor position.
(file-name (git-file-name name version))
(sha256
(base32
- "1cv659sqmrvk316fp7mjc58vvbcg1j6s2q4rwgqrpbyszrxl3i63"))))
+ "01lh1df0bnas1p7xlqc4i1jd67f8lxgq0q2zsvx10z8828i76j3v"))))
(build-system emacs-build-system)
(propagated-inputs
`(("emacs-helm" ,emacs-helm)))
@@ -25761,7 +26002,7 @@ comments or emails.")
(define-public emacs-trashed
(package
(name "emacs-trashed")
- (version "1.9.0")
+ (version "2.1.2")
(source
(origin
(method git-fetch)
@@ -25770,7 +26011,7 @@ comments or emails.")
(commit version)))
(file-name (git-file-name name version))
(sha256
- (base32 "13grdi12iwlw4fiphdfmvclfpbr6ajlgfbfyi7v41z8k3rxz4ypz"))))
+ (base32 "0lfza55nbb62nmr27cwpcz2ad1vm95piq4nfd8zvkwqbn6klwmm6"))))
(build-system emacs-build-system)
(home-page "https://github.com/shingo256/trashed/")
(synopsis "View and edit system trash can in Emacs")
diff --git a/gnu/packages/engineering.scm b/gnu/packages/engineering.scm
index 5166a4635c..baddaf1737 100644
--- a/gnu/packages/engineering.scm
+++ b/gnu/packages/engineering.scm
@@ -15,11 +15,11 @@
;;; Copyright © 2019 Steve Sprang <scs@stevesprang.com>
;;; Copyright © 2019 John Soo <jsoo1@asu.edu>
;;; Copyright © 2020 Brice Waegeneire <brice@waegenei.re>
-;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com>
+;;; Copyright © 2020,2021 Vincent Legoll <vincent.legoll@gmail.com>
;;; Copyright © 2020 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2020 Ekaitz Zarraga <ekaitz@elenq.tech>
;;; Copyright © 2020 B. Wilson <elaexuotee@wilsonb.com>
-;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
+;;; Copyright © 2020, 2021 Vinicius Monego <monego@posteo.net>
;;; Copyright © 2020 Morgan Smith <Morgan.J.Smith@outlook.com>
;;;
;;; This file is part of GNU Guix.
@@ -1214,14 +1214,14 @@ use on a given system.")
(define-public libredwg
(package
(name "libredwg")
- (version "0.11.1")
+ (version "0.12")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://gnu/libredwg/libredwg-"
version ".tar.xz"))
(sha256
- (base32 "1xx6y6ckm4mzqln8y8lqf5frcn2b32ypc0d0h9dzpz6363zh7pdn"))))
+ (base32 "0z5algzi3alq166885y0qyj2gnc7gc6vhnz7nw0kwc0d236p6md8"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--disable-bindings")))
@@ -1524,7 +1524,7 @@ bindings for Python, Java, OCaml and more.")
(define-public radare2
(package
(name "radare2")
- (version "4.4.0")
+ (version "5.0.0")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -1532,7 +1532,7 @@ bindings for Python, Java, OCaml and more.")
(commit version)))
(sha256
(base32
- "0gwdnrnk7wdgkajp2qwg4fyplh7nsbmf01bzx07px6xmiscd9z2s"))
+ "0aa7c27kd0l55fy5qfvxqmakp4pz6240v3hn84095qmqkzcbs420"))
(file-name (git-file-name name version))))
(build-system gnu-build-system)
(arguments
@@ -2367,7 +2367,7 @@ simulation.")
(define-public cutter
(package
(name "cutter")
- (version "1.10.3")
+ (version "1.12.0")
(source
(origin
(method git-fetch)
@@ -2376,7 +2376,7 @@ simulation.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "0qj8jyij02nif4jpirl09ygwnv8a9zi3vkb5sf5s8mg7qwlpnvyk"))))
+ (base32 "0ljj3j3apbbw628n2nyrxpbnclixx20bqjxm0xwggqzz9vywsar0"))))
(build-system gnu-build-system)
(arguments
`(#:phases
diff --git a/gnu/packages/enlightenment.scm b/gnu/packages/enlightenment.scm
index 99309dd4a0..d2769a4d76 100644
--- a/gnu/packages/enlightenment.scm
+++ b/gnu/packages/enlightenment.scm
@@ -198,7 +198,7 @@ removable devices or support for multimedia.")
(define-public terminology
(package
(name "terminology")
- (version "1.8.1")
+ (version "1.9.0")
(source (origin
(method url-fetch)
(uri
@@ -206,7 +206,7 @@ removable devices or support for multimedia.")
"terminology/terminology-" version ".tar.xz"))
(sha256
(base32
- "1fxqjf7g30ix4qxi6366rrax27s3maxq43z2vakwnhz4mp49m9h4"))
+ "0v74858yvrrfy0l2pq7yn6izvqhpkb9gw2jpd3a3khjwv8kw6frz"))
(modules '((guix build utils)))
;; Remove the bundled fonts.
(snippet
@@ -217,10 +217,11 @@ removable devices or support for multimedia.")
#t))))
(build-system meson-build-system)
(arguments
- `(#:configure-flags (list "-Dtests=true"
- (string-append "-Dedje-cc="
- (assoc-ref %build-inputs "efl")
- "/bin/edje_cc"))
+ `(#:configure-flags
+ (let ((efl (assoc-ref %build-inputs "efl")))
+ (list "-Dtests=true"
+ (string-append "-Dedje-cc=" efl "/bin/edje_cc")
+ (string-append "-Deet=" efl "/bin/eet")))
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'set-home-directory
diff --git a/gnu/packages/erlang.scm b/gnu/packages/erlang.scm
index 93569f3560..7b5dc70b5d 100644
--- a/gnu/packages/erlang.scm
+++ b/gnu/packages/erlang.scm
@@ -4,6 +4,7 @@
;;; Copyright © 2016, 2017 Pjotr Prins <pjotr.guix@thebird.nl>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Nikita <nikita@n0.is>
+;;; Copyright © 2021 Oskar Köök <oskar@maatriks.ee>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -40,7 +41,7 @@
(define-public erlang
(package
(name "erlang")
- (version "21.3.8.13")
+ (version "23.2.1")
(source (origin
(method git-fetch)
;; The tarball from http://erlang.org/download contains many
@@ -52,7 +53,7 @@
(file-name (git-file-name name version))
(sha256
(base32
- "1dj37vk712dx76y25g13na24wbpn7a5ddmlpf4n51gm10sib54wj"))
+ "1p3lw4bcm2dph3pf1h4i0d9pzrcfr83r0iadqanxkwbmm1bl11pm"))
(patches (search-patches "erlang-man-path.patch"))))
(build-system gnu-build-system)
(native-inputs
@@ -68,7 +69,7 @@
(version-major+minor version) ".tar.gz"))
(sha256
(base32
- "0wm1dg1psv1n3gpiwyms06yhsryrnr28p455fp0l1ak8hdf4nipm"))))))
+ "0rq0rw68f02vckgdiwmvx8bvyv00l81s27cq59i3h79j9prfal2n"))))))
(inputs
`(("ncurses" ,ncurses)
("openssl" ,openssl)
@@ -180,6 +181,14 @@
(lambda _
(invoke "./otp_build" "autoconf")
#t))
+ (add-after 'autoconf 'patch-configure-script-shell
+ (lambda _
+ (substitute* "configure"
+ (("cmd_str=\"./configure")
+ (string-append "cmd_str=\""
+ (which "sh")
+ " ./configure")))
+ #t))
(add-after 'install 'patch-erl
;; This only works after install.
(lambda* (#:key outputs #:allow-other-keys)
diff --git a/gnu/packages/file-systems.scm b/gnu/packages/file-systems.scm
index 2c5ad95d63..e6ee645be0 100644
--- a/gnu/packages/file-systems.scm
+++ b/gnu/packages/file-systems.scm
@@ -3,7 +3,7 @@
;;; Copyright © 2017 Gábor Boskovits <boskovits@gmail.com>
;;; Copyright © 2017, 2018 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2018 Leo Famulari <leo@famulari.name>
-;;; Copyright © 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2020 Raghav Gururajan <raghavgururajan@disroot.org>
;;; Copyright © 2020 Morgan Smith <Morgan.J.Smith@outlook.com>
;;; Copyright © 2021 raid5atemyhoemwork <raid5atemyhomework@protonmail.com>
@@ -847,7 +847,7 @@ APFS.")
(define-public zfs
(package
(name "zfs")
- (version "0.8.5")
+ (version "2.0.1")
(outputs '("out" "module" "src"))
(source
(origin
@@ -856,7 +856,7 @@ APFS.")
"/download/zfs-" version
"/zfs-" version ".tar.gz"))
(sha256
- (base32 "0gfdnynmsxbhi97q73smrgmcw1k8zmlr1hgljfn38sk0kimivd6v"))))
+ (base32 "0y3992l4nzr67q18lz1kizw0za1shvqbpmsjz9shv4frh5ihllbi"))))
(build-system linux-module-build-system)
(arguments
`(;; The ZFS kernel module should not be downloaded since the license
@@ -885,19 +885,33 @@ APFS.")
(let ((out (assoc-ref outputs "out"))
(src (assoc-ref outputs "src"))
(util-linux (assoc-ref inputs "util-linux"))
- (nfs-utils (assoc-ref inputs "nfs-utils")))
+ (nfs-utils (assoc-ref inputs "nfs-utils"))
+ (kmod (assoc-ref inputs "kmod-runtime")))
+ (substitute* "etc/Makefile.in"
+ ;; This just contains an example configuration file for
+ ;; configuring ZFS on traditional init systems, skip it
+ ;; since we cannot use it anyway; the install target becomes
+ ;; misdirected.
+ (("= default ") "= "))
+ (substitute* "lib/libzfs/os/linux/libzfs_util_os.c"
+ ;; Use path to /gnu/store/*-kmod in actual path that is exec'ed.
+ (("\"/sbin/modprobe\"")
+ (string-append "\"" kmod "/bin/modprobe" "\""))
+ ;; Just use 'modprobe' in message to user, since Guix
+ ;; does not have a traditional /sbin/
+ (("'/sbin/modprobe ") "'modprobe "))
(substitute* "contrib/Makefile.in"
;; This is not configurable nor is its hard-coded /usr prefix.
((" initramfs") ""))
- (substitute* "module/zfs/zfs_ctldir.c"
+ (substitute* "module/os/linux/zfs/zfs_ctldir.c"
(("/usr/bin/env\", \"umount")
(string-append util-linux "/bin/umount\", \"-n"))
(("/usr/bin/env\", \"mount")
(string-append util-linux "/bin/mount\", \"-n")))
- (substitute* "lib/libzfs/libzfs_mount.c"
+ (substitute* "lib/libzfs/os/linux/libzfs_mount_os.c"
(("/bin/mount") (string-append util-linux "/bin/mount"))
(("/bin/umount") (string-append util-linux "/bin/umount")))
- (substitute* "lib/libshare/nfs.c"
+ (substitute* "lib/libshare/os/linux/nfs.c"
(("/usr/sbin/exportfs")
(string-append nfs-utils "/sbin/exportfs")))
(substitute* "config/zfs-build.m4"
@@ -915,7 +929,9 @@ APFS.")
(substitute* "contrib/pyzfs/Makefile.in"
((".*install-lib.*") ""))
(substitute* '("Makefile.am" "Makefile.in")
- (("\\$\\(prefix)/src") (string-append src "/src"))))
+ (("\\$\\(prefix)/src") (string-append src "/src")))
+ (substitute* (find-files "udev/rules.d/" ".rules.in$")
+ (("/sbin/modprobe") (string-append kmod "/bin/modprobe"))))
#t))
(replace 'build
(lambda _ (invoke "make")))
@@ -939,6 +955,7 @@ APFS.")
("pkg-config" ,pkg-config)))
(inputs
`(("eudev" ,eudev)
+ ("kmod-runtime" ,kmod)
("libaio" ,libaio)
("libtirpc" ,libtirpc)
("nfs-utils" ,nfs-utils)
@@ -1086,14 +1103,14 @@ Dropbox API v2.")
(define-public dbxfs
(package
(name "dbxfs")
- (version "1.0.48")
+ (version "1.0.50")
(source
(origin
(method url-fetch)
(uri (pypi-uri "dbxfs" version))
(sha256
(base32
- "07q7dgqaqqyapjl9r4lqydflrgx4dh84c1qsb0jvfmqj3i8887ak"))
+ "01zvk862ybz12270q0r2l1i7kdj30ib2gxrlxmwvi19b2fkf39na"))
(patches (search-patches "dbxfs-remove-sentry-sdk.patch"))))
(build-system python-build-system)
(arguments
diff --git a/gnu/packages/finance.scm b/gnu/packages/finance.scm
index e7d58bbcc0..8ead37beb3 100644
--- a/gnu/packages/finance.scm
+++ b/gnu/packages/finance.scm
@@ -1380,56 +1380,6 @@ following three utilities are included with the library:
@end enumerate")
(license license:gpl2+)))
-(define-public opensp
- (package
- (name "opensp")
- (version "1.5.2")
- (source (origin
- (method url-fetch)
- (uri (string-append "mirror://sourceforge/openjade/opensp/"
- version "/OpenSP-" version ".tar.gz"))
- (sha256
- (base32
- "1khpasr6l0a8nfz6kcf3s81vgdab8fm2dj291n5r2s53k228kx2p"))))
- (build-system gnu-build-system)
- (native-inputs
- `(("gettext" ,gettext-minimal)))
- (inputs
- `(("docbook-xml" ,docbook-xml-4.1.2)
- ("docbook-xsl" ,docbook-xsl)
- ("xmlto" ,xmlto)))
- (arguments
- `(;; TODO: Fix and enable tests.
- #:tests? #f
- #:phases
- (modify-phases %standard-phases
- (add-after 'unpack 'patch-docbook-paths
- (lambda* (#:key inputs #:allow-other-keys)
- (let ((xmldoc (string-append (assoc-ref inputs "docbook-xml")
- "/xml/dtd/docbook"))
- (xsldoc (string-append (assoc-ref inputs "docbook-xsl")
- "/xml/xsl/docbook-xsl-"
- ,(package-version docbook-xsl))))
- (substitute* (find-files "docsrc" "\\.xml$")
- (("/usr/share/sgml/docbook/xml-dtd-4.1.2") xmldoc)
- (("http://.*/docbookx\\.dtd")
- (string-append xmldoc "/docbookx.dtd")))
- ;; Directly pass the path to the stylesheet to xmlto.
- (substitute* "docsrc/Makefile.in"
- (("\\$\\(XMLTO\\)")
- (string-append "$(XMLTO) -x " xsldoc
- "/manpages/docbook.xsl")))
- #t))))))
- (home-page "http://openjade.sourceforge.net/")
- (synopsis "Suite of SGML/XML processing tools")
- (description "OpenSP is an object-oriented toolkit for SGML parsing and
-entity management.")
- (license
- ;; expat license with added clause regarding advertising
- (license:non-copyleft
- "file://COPYING"
- "See COPYING in the distribution."))))
-
(define-public bitcoin-unlimited
(package
(name "bitcoin-unlimited")
diff --git a/gnu/packages/games.scm b/gnu/packages/games.scm
index d53583168e..be7a3cc181 100644
--- a/gnu/packages/games.scm
+++ b/gnu/packages/games.scm
@@ -2,7 +2,7 @@
;;; Copyright © 2013 John Darrington <jmd@gnu.org>
;;; Copyright © 2013 Nikita Karetnikov <nikita@karetnikov.org>
;;; Copyright © 2014, 2016 David Thompson <dthompson2@worcester.edu>
-;;; Copyright © 2014, 2015, 2016, 2017, 2018, 2019, 2020 Eric Bavier <bavier@posteo.net>
+;;; Copyright © 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021 Eric Bavier <bavier@posteo.net>
;;; Copyright © 2014 Cyrill Schenkel <cyrill.schenkel@gmail.com>
;;; Copyright © 2014 Sylvain Beucler <beuc@beuc.net>
;;; Copyright © 2014, 2015, 2018, 2019 Ludovic Courtès <ludo@gnu.org>
@@ -30,7 +30,7 @@
;;; Copyright © 2017, 2019, 2020 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2017, 2018 Rutger Helling <rhelling@mykolab.com>
;;; Copyright © 2017 Roel Janssen <roel@gnu.org>
-;;; Copyright © 2017, 2018, 2019, 2020 Nicolas Goaziou <mail@nicolasgoaziou.fr>
+;;; Copyright © 2017, 2018, 2019, 2020, 2021 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2018 okapi <okapi@firemail.cc>
;;; Copyright © 2018 Tim Gesthuizen <tim.gesthuizen@yahoo.de>
;;; Copyright © 2018 Madalin Ionel-Patrascu <madalinionel.patrascu@mdc-berlin.de>
@@ -1360,7 +1360,7 @@ does not include game data.")
(package
(inherit julius)
(name "augustus")
- (version "1.4.1a")
+ (version "2.0.1")
(source
(origin
(method git-fetch)
@@ -1369,7 +1369,7 @@ does not include game data.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "1xqv8j8jh3f13fjhyf7hk1anrn799cwwsvsd75kpl9n5yh5s1j5y"))
+ (base32 "0czazw8mc3fbvdazs2nzvgxd1dpzjc8z5fwiv89vv4nd7laz3jkj"))
;; Remove unused bundled libraries.
(modules '((guix build utils)))
(snippet
@@ -2237,6 +2237,100 @@ and defeat them with your bubbles!")
;; GPL2+ is for code, CC0 is for art.
(license (list license:gpl2+ license:cc0))))
+(define-public solarus
+ (package
+ (name "solarus")
+ ;; XXX: When updating this package, please also update hash in
+ ;; `solarus-quest-editor' below.
+ (version "1.6.4")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://gitlab.com/solarus-games/solarus")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1n6l91yyqjx0pz4w1lp3yybpq0fs2yjswfcm8c1wjfkxwiznbdxi"))))
+ (build-system cmake-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'disable-failing-tests
+ ;; The following tests fail reporting a missing "/dev/dri"
+ ;; file.
+ (lambda _
+ (substitute* "tests/cmake/AddTestMaps.cmake"
+ ((".*1200_create_shader_from_source.*" all)
+ (string-append "#" all))
+ ((".*1210_shader_scaling_factor.*" all)
+ (string-append "#" all)))
+ #t))
+ (add-before 'check 'set-home
+ ;; Tests fail without setting the following environment
+ ;; variables.
+ (lambda _
+ (setenv "HOME" (getcwd))
+ (setenv "XDG_RUNTIME_DIR" (getcwd))
+ #t)))))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)
+ ("qttools" ,qttools)))
+ (inputs
+ `(("glm" ,glm)
+ ("libmodplug" ,libmodplug)
+ ("libogg" ,libogg)
+ ("libvorbis" ,libvorbis)
+ ("luajit" ,luajit)
+ ("openal" ,openal)
+ ("physfs" ,physfs)
+ ("qtbase" ,qtbase)
+ ("sdl2" ,(sdl-union (list sdl2 sdl2-image sdl2-ttf)))))
+ (home-page "https://www.solarus-games.org/")
+ (synopsis "Lightweight game engine for Action-RPGs")
+ (description
+ "Solarus is a 2D game engine written in C++, that can run games
+scripted in Lua. It has been designed with 16-bit classic Action-RPGs
+in mind.")
+ ;; The source code is licensed under the terms of GPL-3.0.
+ ;; Resources are licensed under the terms of CC-BY-SA-3.0 and
+ ;; CC-BY-SA 4.0.
+ (license (list license:gpl3 license:cc-by-sa3.0 license:cc-by-sa4.0))))
+
+(define-public solarus-quest-editor
+ (package
+ (inherit solarus)
+ (name "solarus-quest-editor")
+ (version (package-version solarus))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://gitlab.com/solarus-games/solarus-quest-editor")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1qbc2j9kalk7xqk9j27s7wnm5zawiyjs47xqkqphw683idmzmjzn"))))
+ (arguments
+ `(#:tests? #false ;no test
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'fix-qt-build
+ ;; XXX: Fix build with Qt 5.15. It has been applied upstream as
+ ;; 81d5c7f1 and can be removed at next upgrade.
+ (lambda _
+ (substitute* "src/entities/jumper.cpp"
+ (("#include <QPainter>" all)
+ (string-append all "\n" "#include <QPainterPath>\n")))
+ #t)))))
+ (inputs
+ `(("solarus" ,solarus)
+ ,@(package-inputs solarus)))
+ (synopsis "Create and modify quests for the Solarus engine")
+ (description
+ "Solarus Quest Editor is a graphical user interface to create and
+modify quests for the Solarus engine.")))
+
(define-public superstarfighter
(package
(name "superstarfighter")
@@ -2365,6 +2459,93 @@ available, as well as a single-player mode with AI-controlled ships.")
"$(call ZIP) -X"))
#t))))
+(define-public trigger-rally
+ (package
+ (name "trigger-rally")
+ (version "0.6.6.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "mirror://sourceforge/trigger-rally/"
+ "trigger-" version "/"
+ "trigger-rally-" version ".tar.gz"))
+ (sha256
+ (base32
+ "016bc2hczqscfmngacim870hjcsmwl8r3aq8x03vpf22s49nw23z"))))
+ (build-system gnu-build-system)
+ (inputs
+ `(("freealut" ,freealut)
+ ("glew" ,glew)
+ ("glu" ,glu)
+ ("mesa" ,mesa)
+ ("openal" ,openal)
+ ("physfs" ,physfs)
+ ("sdl" ,(sdl-union (list sdl2 sdl2-image)))
+ ("tinyxml2" ,tinyxml2)))
+ (arguments
+ `(#:make-flags (list (string-append "prefix=" %output)
+ "bindir=$(prefix)/bin"
+ "datadir=$(datarootdir)"
+ "OPTIMS=-Ofast")
+ #:tests? #f ; No tests present
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (add-before 'build 'cd-src
+ (lambda _ (chdir "src")))
+ (add-before 'build 'remove-timestamps
+ (lambda _
+ (substitute* (list "Trigger/menu.cpp"
+ "PEngine/app.cpp")
+ ((".*__DATE__.*") ""))))
+ (add-before 'build 'make-verbose
+ (lambda _
+ (substitute* "GNUmakefile"
+ (("@\\$\\(CXX\\)") "$(CXX)"))))
+ (add-after 'build 'set-data-path
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((out (assoc-ref outputs "out")))
+ (substitute* "../bin/trigger-rally.config.defs"
+ (("<data path=\"C:[^\"]*\"")
+ (string-append "<data path=\"" out "/share/trigger-rally\""))))))
+ (add-after 'install 'create-desktop-entry
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (apps (string-append out "/share/applications")))
+ (mkdir-p apps)
+ (with-output-to-file
+ (string-append apps "/trigger-rally.desktop")
+ (lambda ()
+ (format #t ; Borrowed from Debian package
+ "[Desktop Entry]~@
+ Name=Trigger Rally~@
+ Icon=trigger-rally~@
+ Comment=3D rally racing car game~@
+ Comment[de]=3D Rally-Autorennen~@
+ Comment[fr_FR]=un jeu de rally en 3D~@
+ Comment[ro_RO]=Un joc în 3D cu curse de raliu~@
+ Exec=~a/bin/trigger-rally~@
+ Terminal=false~@
+ StartupNotify=false~@
+ Type=Application~@
+ TryExec=~:*~a/bin/trigger-rally~@
+ Categories=Game;ArcadeGame;~@
+ Keywords=racing;tracks;~@
+ Keywords[de]=Rennstrecke;~%"
+ out)))))))))
+ (home-page "http://trigger-rally.sourceforge.net")
+ (synopsis "Fast-paced single-player racing game")
+ (description "Trigger-rally is a 3D rally simulation with great physics
+for drifting on over 200 maps. Different terrain materials like dirt,
+asphalt, sand, ice, etc. and various weather, light, and fog conditions give
+this rally simulation the edge over many other games. You need to make it
+through the maps in often tight time limits and can further improve by beating
+the recorded high scores. All attached single races must be finished in time
+in order to win an event, unlocking additional events and cars. Most maps are
+equipped with spoken co-driver notes and co-driver icons.")
+ (license (list license:cc0 ;textures and audio in data.zip
+ license:gpl2+))))
+
(define-public ufo2map
(package
(name "ufo2map")
@@ -6196,31 +6377,15 @@ fish. The whole game is accompanied by quiet, comforting music.")
(define-public crawl
(package
(name "crawl")
- (version "0.25.0")
+ (version "0.26.0")
(source
(origin
(method url-fetch)
- (uri (list
- ;; Older releases get moved into a versioned directory
- (string-append "http://crawl.develz.org/release/"
- (version-major+minor version) "/stone_soup-"
- version "-nodeps.tar.xz")
- ;; Only the latest release is in this directory
- (string-append "http://crawl.develz.org/release/stone_soup-"
- version "-nodeps.tar.xz")))
+ (uri (string-append "https://github.com/crawl/crawl/releases/download/"
+ version "/stone_soup-" version "-nodeps.tar.xz"))
(sha256
- (base32 "0rn1wjxdqw33caiwisfypm1j8cid3c9pz01ahicl17144zs29z3d"))
- (patches (search-patches "crawl-upgrade-saves.patch"))
- ;; The 0.25.0 -nodeps.tar.xz was built from an OSX machine; normally
- ;; apparently it's built from a Debian machine before the Debian
- ;; packages are made. These ._* files are binary and have the string
- ;; "Mac OS X" in them... removing these seems to result in compilation
- ;; again.
- (modules '((guix build utils)))
- (snippet
- '(begin
- (for-each delete-file (find-files "." "^\\._"))
- #t))))
+ (base32 "1m81x1sp6p2ka5w2nib3pcw5w5iv58z41c8aqn0dayi1lb3yslfb"))
+ (patches (search-patches "crawl-upgrade-saves.patch"))))
(build-system gnu-build-system)
(inputs
`(("lua51" ,lua-5.1)
diff --git a/gnu/packages/genimage.scm b/gnu/packages/genimage.scm
index c9ed6258a0..bd77e4dc33 100644
--- a/gnu/packages/genimage.scm
+++ b/gnu/packages/genimage.scm
@@ -1,5 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2018 Danny Milosavljevic <dannym@scratchpost.org>
+;;; Copyright © 2021 Vincent Legoll <vincent.legoll@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -47,7 +48,7 @@
(uri (git-reference
(url "https://github.com/pengutronix/genimage")
(commit (string-append "v" version))))
- (file-name (string-append name "-" version "-checkout"))
+ (file-name (git-file-name name version))
(sha256
(base32
"15jmh17lvm3jw9c92bjarly7iwhmnfl322d91mprfv10ppb9ip54"))
diff --git a/gnu/packages/gl.scm b/gnu/packages/gl.scm
index 2612347913..e378474147 100644
--- a/gnu/packages/gl.scm
+++ b/gnu/packages/gl.scm
@@ -770,7 +770,7 @@ OpenGL.")
(define-public glfw
(package
(name "glfw")
- (version "3.2.1")
+ (version "3.3.2")
(source (origin
(method url-fetch)
(uri (string-append "https://github.com/glfw/glfw"
@@ -778,7 +778,7 @@ OpenGL.")
"/glfw-" version ".zip"))
(sha256
(base32
- "09kk5yc1zhss9add8ryqrngrr16hdmc94rszgng135bhw09mxmdp"))))
+ "1izgc4r0ypxwwklfzj98ab4xqsjpb1wbsfdbivvxpmr95x8km8q8"))))
(build-system cmake-build-system)
(arguments
'(#:tests? #f ; no test target
@@ -792,6 +792,7 @@ OpenGL.")
;; These are in 'Requires.private' of 'glfw3.pc'.
("libx11" ,libx11)
("libxrandr" ,libxrandr)
+ ("libxi" ,libxi)
("libxinerama" ,libxinerama)
("libxcursor" ,libxcursor)
("libxxf86vm" ,libxxf86vm)))
diff --git a/gnu/packages/gnome-xyz.scm b/gnu/packages/gnome-xyz.scm
index 1204dcee90..eb99fda78e 100644
--- a/gnu/packages/gnome-xyz.scm
+++ b/gnu/packages/gnome-xyz.scm
@@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2019, 2020, 2021 Leo Prikler <leo.prikler@student.tugraz.at>
-;;; Copyright © 2019 Alexandros Theodotou <alex@zrythm.org>
+;;; Copyright © 2019, 2021 Alexandros Theodotou <alex@zrythm.org>
;;; Copyright © 2019 Giacomo Leidi <goodoldpaul@autistici.org>
;;; Copyright © 2020 Alex Griffin <a@ajgrf.com>
;;; Copyright © 2020 Jack Hill <jackhill@jackhill.us>
@@ -779,6 +779,55 @@ dark elements. It supports GNOME, Unity, Xfce, and Openbox.")
(define-public numix-theme
(deprecated-package "numix-theme" numix-gtk-theme))
+(define-public markets
+ (package
+ (name "markets")
+ (version "0.4.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/bitstower/markets")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1jzv74l2jkdiqy1hp0ww5yla50dmrvjw7fgkmb26ynblr1nb3rrb"))))
+ (build-system meson-build-system)
+ (arguments
+ `(#:glib-or-gtk? #t
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'skip-gtk-update-icon-cache
+ ;; Don't create 'icon-theme.cache'.
+ (lambda _
+ (substitute* "build-aux/meson/postinstall.py"
+ (("gtk-update-icon-cache") "true"))
+ #t))
+ (add-after 'unpack 'skip-update-desktop-database
+ ;; Don't update desktop file database.
+ (lambda _
+ (substitute* "build-aux/meson/postinstall.py"
+ (("update-desktop-database") "true"))
+ #t)))))
+ (inputs
+ `(("gtk3" ,gtk+)
+ ("gettext" ,gettext-minimal)
+ ("libgee" ,libgee)
+ ("libhandy0" ,libhandy-0.0)
+ ("libsoup" ,libsoup)
+ ("json-glib" ,json-glib)
+ ("vala" ,vala)))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)
+ ("glib" ,glib "bin"))) ; for 'glib-compile-resources'
+ (home-page "https://github.com/bitstower/markets")
+ (synopsis "Stock, currency and cryptocurrency tracker")
+ (description
+ "Markets is a GTK application that displays financial data, helping users
+track stocks, currencies and cryptocurrencies.")
+ (license license:gpl3)))
+
(define-public vala-language-server
(package
(name "vala-language-server")
diff --git a/gnu/packages/gnome.scm b/gnu/packages/gnome.scm
index 3399b5ae7d..fd7a82da69 100644
--- a/gnu/packages/gnome.scm
+++ b/gnu/packages/gnome.scm
@@ -51,7 +51,7 @@
;;; Copyright © 2020 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2020 Naga Malleswari <nagamalli@riseup.net>
;;; Copyright © 2020 Ryan Prior <rprior@protonmail.com>
-;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
+;;; Copyright © 2020, 2021 Vinicius Monego <monego@posteo.net>
;;; Copyright © 2020 Brice Waegeneire <brice@waegenei.re>
;;; Copyright © 2020 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
@@ -2252,6 +2252,16 @@ and keep up to date translations of documentation.")
(lambda _
(substitute* "meson-postinstall.sh"
(("update-desktop-database") (which "true")))
+ #t))
+ (add-after 'install 'patch-thumbnailer
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((out (assoc-ref outputs "out")))
+ (substitute*
+ (string-append
+ out
+ "/share/thumbnailers/gnome-font-viewer.thumbnailer")
+ (("gnome-thumbnail-font")
+ (string-append out "/bin/gnome-thumbnail-font"))))
#t)))))
(native-inputs
`(("gettext" ,gettext-minimal)
@@ -2841,7 +2851,7 @@ database is translated at Transifex.")
(define-public system-config-printer
(package
(name "system-config-printer")
- (version "1.5.14")
+ (version "1.5.15")
(source
(origin
(method url-fetch)
@@ -2850,7 +2860,7 @@ database is translated at Transifex.")
"download/v" version
"/system-config-printer-" version ".tar.xz"))
(sha256
- (base32 "1l79lj44kl079sk308m42x3py1yvcxk5x5bs2vqfmqv26zm8qyqf"))))
+ (base32 "12d6xx51vizc476zfnsga9q09nflp51ipn6y7lhi9w2v4772dlpv"))))
(build-system glib-or-gtk-build-system)
(arguments
`(#:imported-modules ((guix build python-build-system)
@@ -6514,14 +6524,14 @@ almost all of them.")
(define-public eolie
(package
(name "eolie")
- (version "0.9.100")
+ (version "0.9.101")
(source (origin
(method url-fetch)
(uri (string-append "https://adishatz.org/eolie/eolie-"
version ".tar.xz"))
(sha256
(base32
- "1vzhfp8j1z3jvd5ndqfyn7nqrx3zdvx9mv1byjl36nnd9g63ji62"))))
+ "1v8n21y75abdzsnx5idyd0q6yfb6cd0sqbknlbkwh5fdgvjzyvwn"))))
(build-system meson-build-system)
(arguments
`(#:glib-or-gtk? #t
@@ -10799,13 +10809,13 @@ advanced image management tool")
(synopsis "Store and run multiple GNOME terminals in one window")
(description
"Terminator allows you to run multiple GNOME terminals in a grid and
-+tabs, and it supports drag and drop re-ordering of terminals.")
+tabs, and it supports drag and drop re-ordering of terminals.")
(license license:gpl2)))
(define-public libhandy
(package
(name "libhandy")
- (version "1.0.2")
+ (version "1.0.3")
(source
(origin
(method git-fetch)
@@ -10814,7 +10824,7 @@ advanced image management tool")
(commit version)))
(file-name (git-file-name name version))
(sha256
- (base32 "1bmmkahshvlvpsnb7zp8bddv7i1h5k4p967n6kxh71g1vnj8x20m"))))
+ (base32 "0flgwlm921801i3ns0dwqpnxl89f3rzn4y9h723i13bmflch3in7"))))
(build-system meson-build-system)
(arguments
`(#:configure-flags
@@ -11398,7 +11408,7 @@ and toolbars.")
(define-public setzer
(package
(name "setzer")
- (version "0.3.8")
+ (version "0.3.9")
(source
(origin
(method git-fetch)
@@ -11407,7 +11417,7 @@ and toolbars.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "1f5qmkz4hzn54sh56z3hw8zrvg93xlz62ggzlzyg7vgsr83kpns9"))))
+ (base32 "1qmy2bxl8x6pijjaaj91v6rqdipha6iyy0b6b9y1lk3r2p3azd42"))))
(build-system meson-build-system)
(arguments
`(#:glib-or-gtk? #t
@@ -11832,7 +11842,7 @@ integrated profiler via Sysprof, debugging support, and more.")
(define-public komikku
(package
(name "komikku")
- (version "0.24.0")
+ (version "0.25.1")
(source
(origin
(method git-fetch)
@@ -11842,7 +11852,7 @@ integrated profiler via Sysprof, debugging support, and more.")
(file-name (git-file-name name version))
(sha256
(base32
- "010p32zrim245y0l784yp0rasqcqlyr3lrxwl3r1876x83qhs6q3"))))
+ "03skci66y9qqiv4bqbbc0w6d6agilwmx95cw7sribj06zcykm7m3"))))
(build-system meson-build-system)
(arguments
`(#:glib-or-gtk? #t
diff --git a/gnu/packages/gnupg.scm b/gnu/packages/gnupg.scm
index 3620efea3a..a2da166bb4 100644
--- a/gnu/packages/gnupg.scm
+++ b/gnu/packages/gnupg.scm
@@ -13,10 +13,11 @@
;;; Copyright © 2016 Troy Sankey <sankeytms@gmail.com>
;;; Copyright © 2017, 2020 Leo Famulari <leo@famulari.name>
;;; Copyright © 2017 Petter <petter@mykolab.ch>
-;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018, 2019 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2018 Björn Höfling <bjoern.hoefling@bjoernhoefling.de>
;;; Copyright © 2019 Mathieu Othacehe <m.othacehe@gmail.com>
+;;; Copyright © 2020 Fredrik Salomonsson <plattfot@posteo.net>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -67,6 +68,7 @@
#:use-module (gnu packages tor)
#:use-module (gnu packages web)
#:use-module (gnu packages xorg)
+ #:use-module (gnu packages xdisorg)
#:use-module (gnu packages xml)
#:use-module (guix packages)
#:use-module (guix download)
@@ -355,13 +357,13 @@ libskba (working with X.509 certificates and CMS data).")
(define-public gpgme
(package
(name "gpgme")
- (version "1.15.0")
+ (version "1.15.1")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://gnupg/gpgme/gpgme-" version ".tar.bz2"))
(sha256
- (base32 "0nqfipv5s4npfidsm1rs3kpq0r0av9bfqfd5r035jibx5k0jniqb"))))
+ (base32 "1bg13l5s8x9p1v0jyv29n84bay27pflindpzjsc9gj7i4wdkrg7f"))))
(build-system gnu-build-system)
(native-inputs
`(("gnupg" ,gnupg)))
@@ -892,6 +894,77 @@ passphrase when @code{gpg} is run and needs it.")))
@dfn{Enlightenment Foundation Libraries} (EFL) that allows users to enter a
passphrase when @code{gpg} is run and needs it.")))
+(define-public pinentry-rofi
+ (package
+ (name "pinentry-rofi")
+ (version "2.0.1")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/plattfot/pinentry-rofi/")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "044bnldz7k74s873jwsjgff176l1jsvpbaka7d1wcj8b5pwqv2av"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:modules
+ ((ice-9 match)
+ (ice-9 ftw)
+ ,@%gnu-build-system-modules)
+ #:phases
+ (modify-phases
+ %standard-phases
+ (add-after 'install 'hall-wrap-binaries
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (let* ((compiled-dir
+ (lambda (out version)
+ (string-append out "/lib/guile/" version "/site-ccache")))
+ (uncompiled-dir
+ (lambda (out version)
+ (string-append
+ out
+ "/share/guile/site"
+ (if (string-null? version) "" "/")
+ version)))
+ (dep-path
+ (lambda (env path)
+ (list env ":" 'prefix (list path))))
+ (out (assoc-ref outputs "out"))
+ (bin (string-append out "/bin/"))
+ (site (uncompiled-dir out "")))
+ (match (scandir site)
+ (("." ".." version)
+ (for-each
+ (lambda (file)
+ (wrap-program
+ (string-append bin file)
+ (dep-path
+ "PATH"
+ (string-append (assoc-ref inputs "rofi") "/bin"))
+ (dep-path
+ "GUILE_LOAD_PATH"
+ (uncompiled-dir out version))
+ (dep-path
+ "GUILE_LOAD_COMPILED_PATH"
+ (compiled-dir out version))))
+ ,''("pinentry-rofi"))
+ #t))))))))
+ (native-inputs
+ `(("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("pkg-config" ,pkg-config)
+ ("texinfo" ,texinfo)))
+ (inputs `(("guile" ,guile-3.0)
+ ("rofi" ,rofi)))
+ (synopsis "Rofi GUI for GnuPG's passphrase input")
+ (description "Pinentry-rofi is a simple graphical user interface for
+passphrase or PIN when required by @code{gpg} or other software. It is using
+the Rofi application launcher as the user interface. Which makes it combined
+with @code{rofi-pass} a good front end for @code{password-store}.")
+ (home-page "https://github.com/plattfot/pinentry-rofi/")
+ (license license:gpl3+)))
+
(define-public pinentry
(package (inherit pinentry-gtk2)
(name "pinentry")))
diff --git a/gnu/packages/gnuzilla.scm b/gnu/packages/gnuzilla.scm
index cead17b204..85b27dd503 100644
--- a/gnu/packages/gnuzilla.scm
+++ b/gnu/packages/gnuzilla.scm
@@ -1305,11 +1305,11 @@ standards of the IceCat project.")
(cpe-version . ,(first (string-split version #\-)))))))
;; Update this together with icecat!
-(define %icedove-build-id "20201215000000") ;must be of the form YYYYMMDDhhmmss
+(define %icedove-build-id "20210111000000") ;must be of the form YYYYMMDDhhmmss
(define-public icedove
(package
(name "icedove")
- (version "78.6.0")
+ (version "78.6.1")
(source icecat-source)
(properties
`((cpe-name . "thunderbird_esr")))
@@ -1589,7 +1589,7 @@ standards of the IceCat project.")
;; in the Thunderbird release tarball. We don't use the release
;; tarball because it duplicates the Icecat sources and only adds the
;; "comm" directory, which is provided by this repository.
- ,(let ((changeset "18be92a3f0388fe1b69941a50cdbadbf2c95b885"))
+ ,(let ((changeset "f99e82f3f3cae6af48006c39fceb3beeabccd6f6"))
(origin
(method hg-fetch)
(uri (hg-reference
@@ -1598,7 +1598,7 @@ standards of the IceCat project.")
(file-name (string-append "thunderbird-" version "-checkout"))
(sha256
(base32
- "1w21g19l93bcna20260cgxjsh17pznd3kdfvyrn23wjkslgpbyi3")))))
+ "0mrar1qsvvlcggzz54nxi70jzk19mq42585905kb5n90ikr9q2q7")))))
("autoconf" ,autoconf-2.13)
("cargo" ,rust-1.41 "cargo")
("clang" ,clang)
diff --git a/gnu/packages/gps.scm b/gnu/packages/gps.scm
index 4fa3bcef19..ca53ac3b73 100644
--- a/gnu/packages/gps.scm
+++ b/gnu/packages/gps.scm
@@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014, 2015 Ludovic Courtès <ludo@gnu.org>
-;;; Copyright © 2016, 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2017, 2018, 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2020 Guillaume Le Vaillant <glv@posteo.net>
@@ -149,7 +149,7 @@ between two other data points.")
(define-public gama
(package
(name "gama")
- (version "2.12")
+ (version "2.13")
(source
(origin
(method url-fetch)
@@ -157,7 +157,7 @@ between two other data points.")
version ".tar.gz"))
(sha256
(base32
- "0zfilasalsy29b7viw0iwgnl9bkvp0l87gpxl1hx7379l8agwqyj"))
+ "041cprbj4lfs42i7sd1c2zlx3r16g6c5shz3qls79gxb7kqflkgb"))
(modules '((guix build utils)))
(snippet
'(begin
diff --git a/gnu/packages/graphics.scm b/gnu/packages/graphics.scm
index 9879130e20..411d89fcc2 100644
--- a/gnu/packages/graphics.scm
+++ b/gnu/packages/graphics.scm
@@ -23,6 +23,7 @@
;;; Copyright © 2020 Raghav Gururajan <raghavgururajan@disroot.org>
;;; Copyright © 2020 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2020 Gabriel Arazas <foo.dogsquared@gmail.com>
+;;; Copyright © 2021 Antoine Côté <antoine.cote@posteo.net>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -428,17 +429,47 @@ with the @command{autotrace} utility or as a C library, @code{libautotrace}.")
(license (list license:gpl2+ ;for the utility itself
license:lgpl2.1+))))) ;for use as a library
+(define-public embree
+ (package
+ (name "embree")
+ (version "3.12.1")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/embree/embree")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "0aznd16n7h8g3f6jcahzfp1dq4r7wayqvn03wsaskiq2dvsi4srd"))))
+ (build-system cmake-build-system)
+ (arguments
+ `(#:tests? #f ; no tests (apparently)
+ #:configure-flags
+ (list
+ "-DEMBREE_ISPC_SUPPORT=OFF")))
+ (inputs
+ `(("tbb" ,tbb)
+ ("glfw" ,glfw)))
+ (home-page "https://www.embree.org/")
+ (synopsis "High performance ray tracing kernels")
+ (description
+ "Embree is a collection of high-performance ray tracing kernels.
+Embree is meant to increase performance of photo-realistic rendering
+applications.")
+ (license license:asl2.0)))
+
(define-public blender
(package
(name "blender")
- (version "2.83.9")
+ (version "2.91.0")
(source (origin
(method url-fetch)
(uri (string-append "https://download.blender.org/source/"
"blender-" version ".tar.xz"))
(sha256
(base32
- "106w9vi6z0gi2nbr73g8pm40w3wn7dkjcibzvvzbc786yrnzvkhb"))))
+ "0x396lgmk0dq9115yrc36s8zwxzmjr490sr5n2y6w27y17yllyjm"))))
(build-system cmake-build-system)
(arguments
(let ((python-version (version-major+minor (package-version python))))
@@ -510,7 +541,8 @@ with the @command{autotrace} utility or as a C library, @code{libautotrace}.")
("python" ,python)
("python-numpy" ,python-numpy)
("tbb" ,tbb)
- ("zlib" ,zlib)))
+ ("zlib" ,zlib)
+ ("embree" ,embree)))
(home-page "https://blender.org/")
(synopsis "3D graphics creation suite")
(description
@@ -588,6 +620,7 @@ application can be customized via its API for Python scripting.")
`(("boost" ,boost)
("jemalloc" ,jemalloc)
("libx11" ,libx11)
+ ("opencolorio" ,opencolorio)
("openimageio" ,openimageio)
("openexr" ,openexr)
("ilmbase" ,ilmbase)
diff --git a/gnu/packages/guile-xyz.scm b/gnu/packages/guile-xyz.scm
index c5eaa8a2ca..c2d853f006 100644
--- a/gnu/packages/guile-xyz.scm
+++ b/gnu/packages/guile-xyz.scm
@@ -82,6 +82,7 @@
#:use-module (gnu packages linux)
#:use-module (gnu packages man)
#:use-module (gnu packages maths)
+ #:use-module (gnu packages mes)
#:use-module (gnu packages multiprecision)
#:use-module (gnu packages ncurses)
#:use-module (gnu packages networking)
@@ -101,6 +102,7 @@
#:use-module (gnu packages texinfo)
#:use-module (gnu packages tls)
#:use-module (gnu packages version-control)
+ #:use-module (gnu packages web)
#:use-module (gnu packages webkit)
#:use-module (gnu packages xdisorg)
#:use-module (gnu packages xorg)
@@ -2570,8 +2572,8 @@ format is also supported.")
(deprecated-package "guile3.0-mcron" mcron))
(define-public guile-picture-language
- (let ((commit "7e5982a2788bd79a45ad6f02db46f061f97b6e14")
- (revision "3"))
+ (let ((commit "291a746a1d3b4784d38b05239bdd7b8e796ce761")
+ (revision "4"))
(package
(name "guile-picture-language")
(version (git-version "0.0.1" revision commit))
@@ -2583,12 +2585,13 @@ format is also supported.")
(file-name (git-file-name name version))
(sha256
(base32
- "1y5f14cll4jx33hr43dpgrpd0yy6g0g7lim365kmgb0h0cvja80p"))))
+ "0rnhf13ds92sbdicshy4sy4kl2kc431fy9vzm1divw974p7v57sd"))))
(build-system gnu-build-system)
(inputs
`(("guile" ,guile-3.0)))
(propagated-inputs
- `(("guile-rsvg" ,guile-rsvg)))
+ `(("guile-cairo" ,guile-cairo)
+ ("guile-rsvg" ,guile-rsvg)))
(native-inputs
`(("autoconf" ,autoconf)
("automake" ,automake)
@@ -4429,6 +4432,74 @@ including parsing and code generation.")
"Guile Shapefile is a Guile library for reading shapefiles.")
(license license:expat)))
+(define-public guile-libyaml
+ (let ((commit "f5d33a6880e96571d3cb079ed7755ffc156cac46")
+ (revision "1"))
+ (package
+ (name "guile-libyaml")
+ (version (git-version "0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/mwette/guile-libyaml")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "12x91983fh1j39zy7kbk19acc1rqdh8515ddx1mh7l26j04k9wgq"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:modules (((guix build guile-build-system)
+ #:prefix guile:)
+ ,@%gnu-build-system-modules)
+ #:imported-modules ((guix build guile-build-system)
+ ,@%gnu-build-system-modules)
+ #:tests? #false ; there are none
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (add-after 'unpack 'remove-unused-files
+ (lambda* (#:key inputs #:allow-other-keys)
+ (for-each delete-file
+ '("guix.scm" "demo1.yml" "demo1.scm"
+ "yaml/libyaml.scm"
+ ;; This file is mismatched with the generated FFI code.
+ "yaml/ffi-help-rt.scm"))
+ (copy-file (string-append (assoc-ref inputs "nyacc")
+ "/share/guile/site/3.0/system/ffi-help-rt.scm")
+ "yaml/ffi-help-rt.scm")
+ (substitute* "yaml/ffi-help-rt.scm"
+ (("system ffi-help-rt") "yaml ffi-help-rt"))
+ #true))
+ (add-before 'build 'build-ffi
+ (lambda* (#:key inputs #:allow-other-keys)
+ (invoke "guild" "compile-ffi"
+ "--no-exec" ; allow us to patch the generated file
+ "yaml/libyaml.ffi")
+ (substitute* "yaml/libyaml.scm"
+ (("system ffi-help-rt") "yaml ffi-help-rt")
+ (("dynamic-link \"libyaml\"")
+ (format #false "dynamic-link \"~a/lib/libyaml\""
+ (assoc-ref inputs "libyaml"))))
+ #true))
+ (replace 'build
+ (assoc-ref guile:%standard-phases 'build))
+ (delete 'install))))
+ (inputs
+ `(("guile" ,guile-3.0)
+ ("libyaml" ,libyaml)))
+ (propagated-inputs
+ `(("guile-bytestructures" ,guile-bytestructures)))
+ (native-inputs
+ `(("nyacc" ,nyacc)))
+ (home-page "https://github.com/mwette/guile-libyaml")
+ (synopsis "Guile wrapper for libyaml")
+ (description
+ "This package provides a simple yaml module for Guile using the
+ffi-helper from nyacc.")
+ (license license:lgpl3+))))
+
(define-public schmutz
(let ((commit "add24588c59552537b8f1316df99a0cdd62c221e")
(revision "1"))
diff --git a/gnu/packages/guile.scm b/gnu/packages/guile.scm
index 1c983e50eb..0d6f13c97f 100644
--- a/gnu/packages/guile.scm
+++ b/gnu/packages/guile.scm
@@ -310,16 +310,19 @@ without requiring the source code to be rewritten.")
(define-public guile-3.0-latest
;; TODO: Make this 'guile-3.0' on the next rebuild cycle.
- (package
- (inherit guile-3.0)
- (version "3.0.5")
- (source (origin
- (inherit (package-source guile-3.0))
- (uri (string-append "mirror://gnu/guile/guile-"
- version ".tar.xz"))
- (sha256
- (base32
- "1wah6fq1h8vmbpdadjych1mq8hyqkd7p015cbxm14ri37l1gnxid"))))))
+ (package-with-extra-patches
+ (package
+ (inherit guile-3.0)
+ (version "3.0.5")
+ (source (origin
+ (inherit (package-source guile-3.0))
+ (uri (string-append "mirror://gnu/guile/guile-"
+ version ".tar.xz"))
+ (sha256
+ (base32
+ "1wah6fq1h8vmbpdadjych1mq8hyqkd7p015cbxm14ri37l1gnxid")))))
+ ;; Remove on the next rebuild cycle.
+ (search-patches "guile-2.2-skip-so-test.patch")))
(define-public guile-next
(deprecated-package "guile-next" guile-3.0))
@@ -578,14 +581,14 @@ specification. These are the main features:
(package
(inherit guile-json-3)
(name "guile-json")
- (version "4.4.1")
+ (version "4.5.1")
(source (origin
(method url-fetch)
(uri (string-append "mirror://savannah/guile-json/guile-json-"
version ".tar.gz"))
(sha256
(base32
- "1xq4f59rdk28xy4sdn6amy07aa19ikrk48iily3kfhwpkbg6v9jj"))))))
+ "0iigada80cg7dl10z6ligiykci0cv9b88zmncz47nsz5g9gacdpc"))))))
(define-public guile2.2-json
(package-for-guile-2.2 guile-json-4))
diff --git a/gnu/packages/idris.scm b/gnu/packages/idris.scm
index 1982d7cf07..ca2772b904 100644
--- a/gnu/packages/idris.scm
+++ b/gnu/packages/idris.scm
@@ -2,7 +2,7 @@
;;; Copyright © 2015 Paul van der Walt <paul@denknerd.org>
;;; Copyright © 2016, 2017 David Craven <david@craven.ch>
;;; Copyright © 2018 Alex ter Weele <alex.ter.weele@gmail.com>
-;;; Copyright © 2019 Eric Bavier <bavier@member.fsf.org>
+;;; Copyright © 2019, 2021 Eric Bavier <bavier@posteo.net>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -38,7 +38,7 @@
(define-public idris
(package
(name "idris")
- (version "1.3.2")
+ (version "1.3.3")
(source (origin
(method url-fetch)
(uri (string-append
@@ -46,10 +46,12 @@
"idris-" version "/idris-" version ".tar.gz"))
(sha256
(base32
- "0wychzkg0yghd2pp8fqz78vp1ayzks191knfpl7mhh8igsmb6bc7"))))
+ "1pachwc6msw3n1mz2z1r1w6h518w9gbhdvbaa5vi1qp3cn3wm6q4"))
+ (patches (search-patches "idris-disable-test.patch"))))
(build-system haskell-build-system)
(native-inputs ;For tests
`(("perl" ,perl)
+ ("ghc-cheapskate" ,ghc-cheapskate)
("ghc-tasty" ,ghc-tasty)
("ghc-tasty-golden" ,ghc-tasty-golden)
("ghc-tasty-rerun" ,ghc-tasty-rerun)))
@@ -98,7 +100,8 @@
(add-after 'unpack 'update-constraints
(lambda _
(substitute* "idris.cabal"
- (("ansi-terminal < 0\\.9") "ansi-terminal < 0.10"))
+ (("ansi-terminal < 0\\.9") "ansi-terminal < 0.10")
+ (("cheapskate >= 0\\.1\\.1\\.2 && < 0\\.2") "cheapskate >= 0.1.1.1 && < 0.2"))
#t))
(add-before 'configure 'set-cc-command
(lambda _
@@ -118,6 +121,7 @@
(add-after 'install 'check
(lambda* (#:key outputs #:allow-other-keys #:rest args)
(let ((out (assoc-ref outputs "out")))
+ (chmod "test/scripts/timeout" #o755) ;must be executable
(setenv "TASTY_NUM_THREADS" (number->string (parallel-job-count)))
(setenv "IDRIS_CC" "gcc") ;Needed for creating executables
(setenv "PATH" (string-append out "/bin:" (getenv "PATH")))
diff --git a/gnu/packages/image-viewers.scm b/gnu/packages/image-viewers.scm
index dfe29d413e..fda9e4cb7b 100644
--- a/gnu/packages/image-viewers.scm
+++ b/gnu/packages/image-viewers.scm
@@ -296,7 +296,7 @@ your images. Among its features are:
(define-public catimg
(package
(name "catimg")
- (version "2.6.0")
+ (version "2.7.0")
(source
(origin
(method git-fetch)
@@ -305,7 +305,7 @@ your images. Among its features are:
(commit version)))
(file-name (git-file-name name version))
(sha256
- (base32 "0g9ywbgy162wiam9hc3yqpq5q4gyxa8fj4jskr3fdz8z8jjaabzz"))))
+ (base32 "0a2dswbv4xddb2l2d55hc43lzvjwrjs5z9am7v6i0p0mi2fmc89s"))))
(build-system cmake-build-system)
(arguments
`(#:tests? #f ; no tests
diff --git a/gnu/packages/image.scm b/gnu/packages/image.scm
index 86e30f991f..339bd7dcf2 100644
--- a/gnu/packages/image.scm
+++ b/gnu/packages/image.scm
@@ -1218,7 +1218,9 @@ processing and analysis library that puts its main emphasis on customizable
algorithms and data structures. It is particularly strong for
multi-dimensional image processing.")
(license license:expat)
- (home-page "https://ukoethe.github.io/vigra/")))
+ (home-page "https://ukoethe.github.io/vigra/")
+ (properties '((max-silent-time . 7200))))) ;2 hours, to avoid timing out
+
(define-public vigra-c
(let* ((commit "66ff4fa5a7d4a77415caa676a45c2c6ea16562e7")
diff --git a/gnu/packages/inkscape.scm b/gnu/packages/inkscape.scm
index 56375f0759..075f901b2d 100644
--- a/gnu/packages/inkscape.scm
+++ b/gnu/packages/inkscape.scm
@@ -120,7 +120,7 @@ as the native format.")
(define-public inkscape-1.0
(package
(name "inkscape")
- (version "1.0.1")
+ (version "1.0.2")
(source
(origin
(method url-fetch)
@@ -129,7 +129,7 @@ as the native format.")
"inkscape-" version ".tar.xz"))
(sha256
(base32
- "1hjp5nnyx2m3miji6q4lcb6zgbi498v641dc7apkqqvayknrb4ng"))
+ "12krl97a00gdcxxibsb7g2lgx5458mhx2437x0hvz350242j6gns"))
(modules '((guix build utils)
(ice-9 format)))
(snippet
diff --git a/gnu/packages/java.scm b/gnu/packages/java.scm
index 758f8f1859..d6afb2e9d3 100644
--- a/gnu/packages/java.scm
+++ b/gnu/packages/java.scm
@@ -14,6 +14,7 @@
;;; Copyright © 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
;;; Copyright © 2020 Raghav Gururajan <raghavgururajan@disroot.org>
;;; Copyright © 2020 Maxim Cournoyer <maxim.cournoyer@gmail.com>
+;;; Copyright © 2021 Vincent Legoll <vincent.legoll@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -13120,7 +13121,7 @@ network protocols, and core version control algorithms.")
(define-public abcl
(package
(name "abcl")
- (version "1.6.0")
+ (version "1.8.0")
(source
(origin
(method url-fetch)
@@ -13128,7 +13129,7 @@ network protocols, and core version control algorithms.")
version "/abcl-src-" version ".tar.gz"))
(sha256
(base32
- "0hvbcsffr8n2xwdixc8wyw1bfl9fxn2gyy0c4nma7j9zbn0wwgw9"))
+ "0zr5mmqyj484vza089l8vc88d07g0m8ymxzglvar3ydwyvi1x1qx"))
(patches
(search-patches
"abcl-fix-build-xml.patch"))))
diff --git a/gnu/packages/kde-frameworks.scm b/gnu/packages/kde-frameworks.scm
index 5482400f02..70cf346ecd 100644
--- a/gnu/packages/kde-frameworks.scm
+++ b/gnu/packages/kde-frameworks.scm
@@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
-;;; Copyright © 2016, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016-2019 Hartmut Goebel <h.goebel@crazy-compilers.com>
;;; Copyright © 2016 David Craven <david@craven.ch>
;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
@@ -1047,13 +1047,12 @@ integration with a custom editor as well as a ready-to-use
("wayland" ,wayland)
("wayland-protocols" ,wayland-protocols)))
(arguments
- `(#:tests? #f ; FIXME tests require weston to run
- ; weston requires wayland flags in mesa
- #:phases
+ `(#:phases
(modify-phases %standard-phases
(add-before 'check 'check-setup
(lambda _
(setenv "XDG_RUNTIME_DIR" "/tmp")
+ (setenv "QT_QPA_PLATFORM" "offscreen")
#t)))))
(home-page "https://community.kde.org/Frameworks")
(synopsis "Qt-style API to interact with the wayland client and server")
diff --git a/gnu/packages/kde.scm b/gnu/packages/kde.scm
index 0cc47e6337..73a2289f04 100644
--- a/gnu/packages/kde.scm
+++ b/gnu/packages/kde.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2016, 2017, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2017, 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 David Craven <david@craven.ch>
;;; Copyright © 2016, 2017 Thomas Danckaert <post@thomasdanckaert.be>
;;; Copyright © 2017, 2018 Mark Meyer <mark@ofosos.org>
@@ -714,6 +714,7 @@ different notification systems.")
("qtmultimedia" ,qtmultimedia)
("qtquickcontrols" ,qtquickcontrols)
("qtquickcontrols2" ,qtquickcontrols2)
+ ("qtwayland" ,qtwayland)
("qtx11extras" ,qtx11extras)))
(home-page "https://community.kde.org/KDEConnect")
(synopsis "Enable your devices to communicate with each other")
@@ -758,6 +759,40 @@ communicate with each other. Here's a few things KDE Connect can do:
charts.")
(license license:lgpl2.1+)))
+(define-public kdf
+ (package
+ (name "kdf")
+ (version "20.12.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "mirror://kde/stable/release-service/"
+ version "/src/kdf-" version ".tar.xz"))
+ (sha256
+ (base32
+ "0ba67hs4vlb3qyvdzhnpmf8p62df12s8aqw4hzf9vnxff3qix5k1"))))
+ (build-system qt-build-system)
+ (native-inputs
+ `(("extra-cmake-modules" ,extra-cmake-modules)
+ ("kdoctools" ,kdoctools)))
+ (inputs
+ `(("kcmutils" ,kcmutils)
+ ("kconfigwidgets" ,kconfigwidgets)
+ ("kcoreaddons" ,kcoreaddons)
+ ("ki18n" ,ki18n)
+ ("kiconthemes" ,kiconthemes)
+ ("kio" ,kio)
+ ("knotifications" ,knotifications)
+ ("kwidgetsaddons" ,kwidgetsaddons)
+ ("kxmlgui" ,kxmlgui)
+ ("qtbase" ,qtbase)))
+ (home-page "https://kde.org/applications/system/kdk")
+ (synopsis "View Disk Usage")
+ (description "KDiskFree displays the available file devices (hard drive
+partitions, floppy and CD drives, etc.) along with information on their
+capacity, free space, type and mount point. It also allows you to mount and
+unmount drives and view them in a file manager.")
+ (license license:gpl2+)))
+
(define-public kcachegrind
(package
(name "kcachegrind")
@@ -913,6 +948,33 @@ Python, PHP, and Perl.")
a variety of formats, including PDF, PostScript, DejaVu, and EPub.")
(license license:gpl2+)))
+(define-public poxml
+ (package
+ (name "poxml")
+ (version "20.12.1")
+ (source (origin
+ (method url-fetch)
+ (uri
+ (string-append "mirror://kde/stable/release-service/" version
+ "/src/poxml-" version ".tar.xz"))
+ (sha256
+ (base32
+ "1smjvblx0jcv3afs2sr4qcmvhqd44iw24hvr9fppa3nxhrmjwmlk"))))
+ (build-system cmake-build-system)
+ (native-inputs
+ `(("extra-cmake-modules" ,extra-cmake-modules)
+ ("kdoctools" ,kdoctools)))
+ (inputs
+ `(("gettext" ,gettext-minimal)
+ ("qtbase" ,qtbase)))
+ (home-page "https://kde.org/applications/development")
+ (synopsis "Tools for translating DocBook XML files with Gettext")
+ (description "This is a collection of tools that facilitate translating
+DocBook XML files using Gettext message files (PO files). Also included are
+several command-line utilities for manipulating DocBook XML files, PO files and
+PO template files.")
+ (license license:gpl2+)))
+
(define-public kdegraphics-mobipocket
(package
(name "kdegraphics-mobipocket")
diff --git a/gnu/packages/libreoffice.scm b/gnu/packages/libreoffice.scm
index 714072e84b..99382c991b 100644
--- a/gnu/packages/libreoffice.scm
+++ b/gnu/packages/libreoffice.scm
@@ -1,7 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2014 John Darrington <jmd@gnu.org>
;;; Copyright © 2015 Andreas Enge <andreas@enge.fr>
-;;; Copyright © 2016, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2018, 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017 Alex Griffin <a@ajgrf.com>
;;; Copyright © 2017 Thomas Danckaert <post@thomasdanckaert.be>
;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
@@ -1085,7 +1085,7 @@ converting QuarkXPress file format. It supports versions 3.1 to 4.1.")
(define-public libreoffice
(package
(name "libreoffice")
- (version "6.4.6.2")
+ (version "6.4.7.2")
(source
(origin
(method url-fetch)
@@ -1094,7 +1094,7 @@ converting QuarkXPress file format. It supports versions 3.1 to 4.1.")
"https://download.documentfoundation.org/libreoffice/src/"
(version-prefix version 3) "/libreoffice-" version ".tar.xz"))
(sha256
- (base32 "0k5aq1pfw2rpq28nkx6syrgwqbbdn6my9bnlqi3fn8qf572q30mb"))))
+ (base32 "0i3654rmzs8aazj8j3dmxamilslfrki0y4sksg3n1zygc2ddfk83"))))
(build-system glib-or-gtk-build-system)
(native-inputs
`(("bison" ,bison)
diff --git a/gnu/packages/libunwind.scm b/gnu/packages/libunwind.scm
index 588b5dd314..9eaf26fca8 100644
--- a/gnu/packages/libunwind.scm
+++ b/gnu/packages/libunwind.scm
@@ -28,14 +28,14 @@
(define-public libunwind
(package
(name "libunwind")
- (version "1.3.1")
+ (version "1.5.0")
(source (origin
(method url-fetch)
(uri (string-append "mirror://savannah/libunwind/libunwind-"
version ".tar.gz"))
(sha256
(base32
- "1y0l08k6ak1mqbfj6accf9s5686kljwgsl4vcqpxzk5n74wpm6a3"))))
+ "05qhzcg1xag3l5m3c805np6k342gc0f3g087b7g16jidv59pccwh"))))
(build-system gnu-build-system)
(arguments
;; FIXME: As of glibc 2.25, we get 1 out of 34 test failures (2 are
diff --git a/gnu/packages/libusb.scm b/gnu/packages/libusb.scm
index c403181c77..cb0d45ce86 100644
--- a/gnu/packages/libusb.scm
+++ b/gnu/packages/libusb.scm
@@ -53,7 +53,7 @@
(define-public libusb
(package
(name "libusb")
- (version "1.0.23")
+ (version "1.0.24")
(source
(origin
(method url-fetch)
@@ -61,7 +61,7 @@
"releases/download/v" version
"/libusb-" version ".tar.bz2"))
(sha256
- (base32 "13dd2a9x290d1q8nb1lqiaf36grcvns5ripk5k2xm0lajmpc04fv"))))
+ (base32 "0amilbi5qncdnrds3ji21vbiz1wvdm1fwp5qrxnk49xkyy2jdzby"))))
(build-system gnu-build-system)
;; XXX: Enabling udev is now recommended, but eudev indirectly depends on
diff --git a/gnu/packages/license.scm b/gnu/packages/license.scm
index 975608c79b..369426768b 100644
--- a/gnu/packages/license.scm
+++ b/gnu/packages/license.scm
@@ -1,7 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2018 Oleg Pykhalov <go.wigust@gmail.com>
;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
+;;; Copyright © 2020, 2021 Michael Rohleder <mike@rohleder.de>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -169,13 +169,13 @@ belonging to various licenses.")
(define-public reuse
(package
(name "reuse")
- (version "0.11.1")
+ (version "0.12.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "reuse" version))
(sha256
- (base32 "09qjb4f49vr0a7zrszab8g719ilg2p6b942mr0bgyvplrjikkid5"))))
+ (base32 "11i1xjbwbqjipzpbrbnp110zx1m49khn6dl5z3mjkjaz9kr6bl2f"))))
(build-system python-build-system)
(native-inputs
`(("python-pytest" ,python-pytest)
diff --git a/gnu/packages/linux.scm b/gnu/packages/linux.scm
index 477dd05b11..85afac2611 100644
--- a/gnu/packages/linux.scm
+++ b/gnu/packages/linux.scm
@@ -353,7 +353,7 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
;; The current "stable" kernels. That is, the most recently released major
;; versions that are still supported upstream.
-(define-public linux-libre-5.10-version "5.10.6")
+(define-public linux-libre-5.10-version "5.10.10")
(define deblob-scripts-5.10
(linux-libre-deblob-scripts
linux-libre-5.10-version
@@ -361,7 +361,7 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "0hh27ccqimagr3aij7ygwikxw66y63sqwd0xlf49bhpjd090r9a7")))
(define-public linux-libre-5.10-pristine-source
(let ((version linux-libre-5.10-version)
- (hash (base32 "02v91afra3pcwfws74wxdsm8pfc57vws659b7j6jmsxm3hnd0rvp")))
+ (hash (base32 "06fvgkrn9127xw9kly6l4ws3yv80q8xfqdzaam92lljim5pqdvb0")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-5.10)))
@@ -369,7 +369,7 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
;; The "longterm" kernels — the older releases with long-term upstream support.
;; Here are the support timelines:
;; <https://www.kernel.org/category/releases.html>
-(define-public linux-libre-5.4-version "5.4.88")
+(define-public linux-libre-5.4-version "5.4.92")
(define deblob-scripts-5.4
(linux-libre-deblob-scripts
linux-libre-5.4-version
@@ -377,12 +377,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "1xghbbnaisjd0k1klbyn1p7r6r4x5a1bpmkm56a3gh2zvw4s7mj8")))
(define-public linux-libre-5.4-pristine-source
(let ((version linux-libre-5.4-version)
- (hash (base32 "1ci432xanm7glgg05012kh43pfi4k771kzih0816y5674v0hg02b")))
+ (hash (base32 "1zcl4dadyfrgmx6rh0ncy403rsqb1qs092m6zr6b3i14i3wpz4y0")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-5.4)))
-(define-public linux-libre-4.19-version "4.19.166")
+(define-public linux-libre-4.19-version "4.19.170")
(define deblob-scripts-4.19
(linux-libre-deblob-scripts
linux-libre-4.19-version
@@ -390,12 +390,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "1jiaw0as1ippkrjdpd52657w5mz9qczg3y2hlra7m9k0xawwiqlf")))
(define-public linux-libre-4.19-pristine-source
(let ((version linux-libre-4.19-version)
- (hash (base32 "03l86ykdjs5wa0n4wknpgy9dv2r6l92qfsyak373jkhs684z53mr")))
+ (hash (base32 "0jjvwbxpfvmzj4z6gkd2mh3kz9vh8hsgsm0013866hzgz1j043fx")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-4.19)))
-(define-public linux-libre-4.14-version "4.14.214")
+(define-public linux-libre-4.14-version "4.14.217")
(define deblob-scripts-4.14
(linux-libre-deblob-scripts
linux-libre-4.14-version
@@ -403,12 +403,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "1qij18inijj6c3ma8hv98yjagnzxdxyn134da9fd23ky8q6hbvky")))
(define-public linux-libre-4.14-pristine-source
(let ((version linux-libre-4.14-version)
- (hash (base32 "07ir4yw7s5c6yb3gjbgjvcqqdgpbsjxrvapgh6zs22ffd8hrchpm")))
+ (hash (base32 "04adj8x7p1has4mh8ygxhqgwb1i08fz9izqw1y6xj5hh8cjnm8v2")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-4.14)))
-(define-public linux-libre-4.9-version "4.9.250")
+(define-public linux-libre-4.9-version "4.9.253")
(define deblob-scripts-4.9
(linux-libre-deblob-scripts
linux-libre-4.9-version
@@ -416,12 +416,12 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "0fxajshb75siq39lj5h8xvhdj8lcmddkslwlyj65rhlwk6g2r4b2")))
(define-public linux-libre-4.9-pristine-source
(let ((version linux-libre-4.9-version)
- (hash (base32 "15vizxd2i2311skjank406ny3bc30c5rz2p9jvh5xz1yv12vzgcy")))
+ (hash (base32 "065w35vb0qp4fvnwmcx7f92inmx64f9r04zzwcwbs0826nl52nws")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-4.9)))
-(define-public linux-libre-4.4-version "4.4.250")
+(define-public linux-libre-4.4-version "4.4.253")
(define deblob-scripts-4.4
(linux-libre-deblob-scripts
linux-libre-4.4-version
@@ -429,7 +429,7 @@ corresponding UPSTREAM-SOURCE (an origin), using the given DEBLOB-SCRIPTS."
(base32 "0hhin1jpfkd6nwrb6xqxjzl3hdxy4pn8a15hy2d3d83yw6pflbsf")))
(define-public linux-libre-4.4-pristine-source
(let ((version linux-libre-4.4-version)
- (hash (base32 "12m14j8654rawj2znkyhvcnwnf53x10zlghxd0mpl8dfzwvn2f5b")))
+ (hash (base32 "0nlqnfhrkaj2s582kc0wxqi0881hgp6l9z85qx4ckflc8jwrh7k6")))
(make-linux-libre-source version
(%upstream-linux-source version hash)
deblob-scripts-4.4)))
@@ -641,6 +641,8 @@ for ARCH and optionally VARIANT, or #f if there is no such configuration."
("CONFIG_MEMCG_KMEM" . #t)
("CONFIG_CPUSETS" . #t)
("CONFIG_PROC_PID_CPUSET" . #t)
+ ;; Allow disk encryption by default
+ ("CONFIG_DM_CRYPT" . m)
;; Modules required for initrd:
("CONFIG_NET_9P" . m)
("CONFIG_NET_9P_VIRTIO" . m)
@@ -850,7 +852,8 @@ for ARCH and optionally VARIANT, or #f if there is no such configuration."
(description
"GNU Linux-Libre is a free (as in freedom) variant of the Linux kernel.
It has been modified to remove all non-free binary blobs.")
- (license license:gpl2)))
+ (license license:gpl2)
+ (properties '((max-silent-time . 3600))))) ;don't timeout on blob scan.
;;;
@@ -2215,7 +2218,7 @@ external rate conversion.")
(define-public iptables
(package
(name "iptables")
- (version "1.8.6")
+ (version "1.8.7")
(source
(origin
(method url-fetch)
@@ -2224,7 +2227,7 @@ external rate conversion.")
(string-append "https://www.netfilter.org/projects/iptables/"
"files/iptables-" version ".tar.bz2")))
(sha256
- (base32 "0rvp0k8a72h2snrdx48cfn75bfa0ycrd2xl3kjysbymq7q6gxx50"))))
+ (base32 "1w6qx3sxzkv80shk21f63rq41c84irpx68k62m2cv629n1mwj2f1"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@@ -5631,7 +5634,7 @@ The collection contains a set of bandwidth and latency benchmark such as:
(package
(name "rng-tools")
(home-page "https://github.com/nhorman/rng-tools")
- (version "6.10")
+ (version "6.11")
(source (origin
(method git-fetch)
(uri (git-reference (url home-page)
@@ -5639,7 +5642,7 @@ The collection contains a set of bandwidth and latency benchmark such as:
(file-name (git-file-name name version))
(sha256
(base32
- "0hbml37yxs0fs69g7f2x4ixq61z0029swy99rn7ykma9mi6b7ni9"))))
+ "0wwvi8a8k2ahhmwln4w970b8gd3in3g13jkbsapkpnspwmlqj5xa"))))
(build-system gnu-build-system)
(arguments
`(;; Disable support for various hardware entropy sources as they need
@@ -5916,29 +5919,29 @@ the default @code{nsswitch} and the experimental @code{umich_ldap}.")
(define-public mcelog
(package
(name "mcelog")
- (version "173")
- (source (origin
- (method url-fetch)
- (uri (string-append "https://git.kernel.org/cgit/utils/cpu/mce/"
- "mcelog.git/snapshot/v" version ".tar.gz"))
- (sha256
- (base32
- "1a1j4lsvql3aiqbkdn10hhpvmhavhlr9qkh2scxcv1kn7rvvclih"))
- (file-name (string-append name "-" version ".tar.gz"))
- (modules '((guix build utils)))
- (snippet
- `(begin
- ;; The snapshots lack a .git directory,
- ;; breaking ‘git describe’.
- (substitute* "Makefile"
- (("\"unknown\"") (string-append "\"v" ,version "\"")))
- #t))))
+ (version "175")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://git.kernel.org/pub/scm/utils/cpu/mce/mcelog.git")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0vvrnjkh1jp7f6295syydg7lplqmcm8msdls3xyk8xfiz69xqdjz"))
+ (modules '((guix build utils)))
+ (snippet
+ `(begin
+ ;; The checkout lack a .git directory, breaking ‘git describe’.
+ (substitute* "Makefile"
+ (("\"unknown\"") (string-append "\"v" ,version "\"")))
+ #t))))
(build-system gnu-build-system)
(arguments
`(#:phases (modify-phases %standard-phases
(delete 'configure)) ; no configure script
#:make-flags (let ((out (assoc-ref %outputs "out")))
- (list "CC=gcc"
+ (list (string-append "CC=" ,(cc-for-target))
(string-append "prefix=" out)
(string-append "DOCDIR=" out "/share/doc/"
,name "-" ,version)
@@ -6439,14 +6442,14 @@ re-use code and to avoid re-inventing the wheel.")
(define-public libnftnl
(package
(name "libnftnl")
- (version "1.1.8")
+ (version "1.1.9")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://netfilter.org/libnftnl/"
"libnftnl-" version ".tar.bz2"))
(sha256
- (base32 "04dp797llg3cqzivwrql30wg9mfr0ngnp0v5gs7jcdmp11dzm8q4"))))
+ (base32 "16jbp4fs5dz2yf4c3bl1sb48x9x9wi1chv39zwmfgya1k9pimcp9"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
@@ -6463,7 +6466,7 @@ used by nftables.")
(define-public nftables
(package
(name "nftables")
- (version "0.9.7")
+ (version "0.9.8")
(source
(origin
(method url-fetch)
@@ -6472,7 +6475,7 @@ used by nftables.")
(string-append "https://www.nftables.org/projects/nftables"
"/files/nftables-" version ".tar.bz2")))
(sha256
- (base32 "1c1c2475nifncv0ng8z77h2dpanlsx0bhqm15k00jb3a6a68lszy"))))
+ (base32 "1r4g22grhd4s1918wws9vggb8821sv4kkj8197ygxr6sar301z30"))))
(build-system gnu-build-system)
(arguments `(#:configure-flags
'("--disable-man-doc"))) ; FIXME: Needs docbook2x.
@@ -7862,7 +7865,7 @@ kernel side implementation.")
(define-public erofs-utils
(package
(name "erofs-utils")
- (version "1.2")
+ (version "1.2.1")
(source
(origin
(method git-fetch)
@@ -7871,7 +7874,7 @@ kernel side implementation.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "07hvijq2hsn3gg1kb8abrfk23n83j57yx8kyv4wqgwhhvd30myjc"))))
+ (base32 "1vb4mxsb59g29x7l22cffsqa8x743sra4j5zbmx89hjwpwm9vvcg"))))
(build-system gnu-build-system)
(inputs
`(("lz4" ,lz4)
diff --git a/gnu/packages/lisp-xyz.scm b/gnu/packages/lisp-xyz.scm
index f0881bdfb7..3fefccf1e8 100644
--- a/gnu/packages/lisp-xyz.scm
+++ b/gnu/packages/lisp-xyz.scm
@@ -19,8 +19,10 @@
;;; Copyright © 2020 Konrad Hinsen <konrad.hinsen@fastmail.net>
;;; Copyright © 2020 Dimakis Dimakakos <me@bendersteed.tech>
;;; Copyright © 2020 Oleg Pykhalov <go.wigust@gmail.com>
-;;; Copyright © 2020 Adam Kandur <rndd@tuta.io>
+;;; Copyright © 2020, 2021 Adam Kandur <rndd@tuta.io>
;;; Copyright © 2020, 2021 Sharlatan Hellseher <sharlatanus@gmail.com>
+;;; Copyright © 2021 Aurora <rind38@disroot.org>
+;;; Copyright © 2021 Matthew Kraai <kraai@ftbfs.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -52,10 +54,12 @@
#:use-module (guix utils)
#:use-module (guix build-system asdf)
#:use-module (guix build-system trivial)
+ #:use-module (gnu packages base)
#:use-module (gnu packages c)
#:use-module (gnu packages compression)
#:use-module (gnu packages databases)
#:use-module (gnu packages enchant)
+ #:use-module (gnu packages file)
#:use-module (gnu packages fonts)
#:use-module (gnu packages fontutils)
#:use-module (gnu packages glib)
@@ -456,33 +460,33 @@ compatible with ANSI-compliant Common Lisp implementations.")
(sbcl-package->ecl-package sbcl-cl-ppcre))
(define-public sbcl-uax-15
- (let ((commit "e7439a91b72f533fcf736643e3ff0677b56c2e7d")
- (revision "1"))
- (package
- (name "sbcl-uax-15")
- (version (git-version "0.1" revision commit))
- (source
- (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/sabracrolleton/uax-15")
- (commit commit)))
- (file-name (git-file-name "uax-15" version))
- (sha256
- (base32 "1vf8a2aikgx0l5bsq0z9s0dw3sgx1887xhagdlf66fwffa5jskg6"))))
- (build-system asdf-build-system/sbcl)
- (native-inputs
- `(("fiveam" ,sbcl-fiveam)))
- (inputs
- `(("cl-ppcre" ,sbcl-cl-ppcre)
- ("split-sequence" ,sbcl-split-sequence)))
- (arguments
- `(#:asd-systems '("uax-15")))
- (home-page "https://github.com/sabracrolleton/uax-15")
- (synopsis "Common Lisp implementation of unicode normalization functions")
- (description "This package provides supports for unicode normalization,
-RFC8264 and RFC7564.")
- (license license:expat))))
+ (package
+ (name "sbcl-uax-15")
+ (version "0.1.1")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/sabracrolleton/uax-15")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name "uax-15" version))
+ (sha256
+ (base32 "0p2ckw7mzxhwa9vbwj2q2dzayz9dl94d9yqd2ynp0pc5v8i0n2fr"))))
+ (build-system asdf-build-system/sbcl)
+ (arguments
+ `(#:asd-systems
+ '("uax-15")))
+ (native-inputs
+ `(("fiveam" ,sbcl-fiveam)))
+ (inputs
+ `(("cl-ppcre" ,sbcl-cl-ppcre)
+ ("split-sequence" ,sbcl-split-sequence)))
+ (home-page "https://github.com/sabracrolleton/uax-15")
+ (synopsis "Common Lisp implementation of unicode normalization functions")
+ (description
+ "This package provides supports for unicode normalization, RFC8264 and
+RFC7564.")
+ (license license:expat)))
(define-public cl-uax-15
(sbcl-package->cl-source-package sbcl-uax-15))
@@ -1939,6 +1943,51 @@ pretty, documentation is code.")
;; TODO: Find why the tests fail on ECL.
((#:tests? _ #f) #f))))))
+(define-public sbcl-mssql
+ (let ((commit "045602a19a32254108f2b75871049293f49731eb")
+ (revision "1"))
+ (package
+ (name "sbcl-mssql")
+ (version (git-version "0.0.3" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/archimag/cl-mssql")
+ (commit commit)))
+ (file-name (git-file-name "cl-mssql" version))
+ (sha256
+ (base32 "09i50adppgc1ybm3ka9vbindhwa2x29f9n3n0jkrryymdhb8zknm"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("cffi" ,sbcl-cffi)
+ ("freetds" ,freetds)
+ ("garbage-pools" ,sbcl-garbage-pools)
+ ("iterate" ,sbcl-iterate)
+ ("parse-number" ,sbcl-parse-number)))
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'fix-paths
+ (lambda* (#:key inputs #:allow-other-keys)
+ (substitute* "src/mssql.lisp"
+ (("libsybdb" all)
+ (string-append (assoc-ref inputs "freetds") "/lib/" all)))
+ #t)))))
+ (home-page "https://github.com/archimag/cl-mssql")
+ (synopsis "Common Lisp library to interact with MS SQL Server databases")
+ (description
+ "@code{cl-mssql} provides an interface to connect to Microsoft SQL
+server. It uses the @code{libsybdb} foreign library provided by the FreeTDS
+project.")
+ (license license:llgpl))))
+
+(define-public ecl-mssql
+ (sbcl-package->ecl-package sbcl-mssql))
+
+(define-public cl-mssql
+ (sbcl-package->cl-source-package sbcl-mssql))
+
(define-public sbcl-lisp-unit
(let ((commit "89653a232626b67400bf9a941f9b367da38d3815"))
(package
@@ -2465,7 +2514,7 @@ non-consing thread safe queues and fibonacci priority queues.")
(define-public sbcl-cffi
(package
(name "sbcl-cffi")
- (version "0.21.0")
+ (version "0.23.0")
(source
(origin
(method git-fetch)
@@ -2474,7 +2523,7 @@ non-consing thread safe queues and fibonacci priority queues.")
(commit (string-append "v" version))))
(file-name (git-file-name "cffi-bootstrap" version))
(sha256
- (base32 "1qalargz9bhp850qv60ffwpdqi4xirzar4l3g6qcg8yc6xqf2cjk"))))
+ (base32 "03s98imc5niwnpj3hhrafl7dmxq45g74h96sm68976k7ahi3vl5b"))))
(build-system asdf-build-system/sbcl)
(inputs
`(("alexandria" ,sbcl-alexandria)
@@ -4343,8 +4392,8 @@ Long Painful History of Time\".")
(sbcl-package->ecl-package sbcl-local-time))
(define-public sbcl-trivial-mimes
- (let ((commit "303f8ac0aa6ca0bc139aa3c34822e623c3723fab")
- (revision "1"))
+ (let ((commit "a741fc2f567a4f86b853fd4677d75e62c03e51d9")
+ (revision "2"))
(package
(name "sbcl-trivial-mimes")
(version (git-version "1.1.0" revision commit))
@@ -4356,7 +4405,7 @@ Long Painful History of Time\".")
(commit commit)))
(file-name (git-file-name name version))
(sha256
- (base32 "17jxgl47r695bvsb7wi3n2ws5rp1zzgvw0zii8cy5ggw4b4ayv6m"))))
+ (base32 "00kcm17q5plpzdj1qwg83ldhxksilgpcdkf3m9azxcdr968xs9di"))))
(build-system asdf-build-system/sbcl)
(native-inputs
`(("stefil" ,sbcl-hu.dwim.stefil)))
@@ -4367,7 +4416,7 @@ Long Painful History of Time\".")
(description
"This is a teensy library that provides some functions to determine the
mime-type of a file.")
- (license license:artistic2.0))))
+ (license license:zlib))))
(define-public cl-trivial-mimes
(sbcl-package->cl-source-package sbcl-trivial-mimes))
@@ -6032,8 +6081,8 @@ programming style and the efficiency of an iterative programming style.")
(sbcl-package->ecl-package sbcl-series))
(define-public sbcl-periods
- (let ((commit "983d4a57325db3c8def942f163133cec5391ec28")
- (revision "1"))
+ (let ((commit "60383dcef88a1ac11f82804ae7a33c361dcd2949")
+ (revision "2"))
(package
(name "sbcl-periods")
(version (git-version "0.0.2" revision commit))
@@ -6046,7 +6095,7 @@ programming style and the efficiency of an iterative programming style.")
(file-name (git-file-name name version))
(sha256
(base32
- "0z30jr3lxz3cmi019fsl4lgcgwf0yqpn95v9zkkkwgymdrkd4lga"))))
+ "1ym2j4an9ig2hl210jg91gpf7xfnp6mlhkw3n9kkdnwiji3ipqlk"))))
(build-system asdf-build-system/sbcl)
(inputs
`(("local-time" ,sbcl-local-time)
@@ -6453,8 +6502,8 @@ ability to store all Common Lisp data types into streams.")
(sbcl-package->ecl-package sbcl-cl-store))
(define-public sbcl-cl-gobject-introspection
- (let ((commit "7b703e2384945ea0ac39d9b766de434a08d81560")
- (revision "0"))
+ (let ((commit "d0136c8d9ade2560123af1fc55bbf70d2e3db539")
+ (revision "1"))
(package
(name "sbcl-cl-gobject-introspection")
(version (git-version "0.3" revision commit))
@@ -6468,7 +6517,7 @@ ability to store all Common Lisp data types into streams.")
(file-name (git-file-name name version))
(sha256
(base32
- "1zcqd2qj14f6b38vys8gr89s6cijsp9r8j43xa8lynilwva7bwyh"))))
+ "0dz0r73pq7yhz2iq2jnkq977awx2zws2qfxdcy33329sys1ii32p"))))
(build-system asdf-build-system/sbcl)
(inputs
`(("alexandria" ,sbcl-alexandria)
@@ -6480,12 +6529,9 @@ ability to store all Common Lisp data types into streams.")
(native-inputs
`(("fiveam" ,sbcl-fiveam)))
(arguments
- ;; TODO: Tests fail, see
- ;; https://github.com/andy128k/cl-gobject-introspection/issues/70.
- '(#:tests? #f
- #:phases
+ '(#:phases
(modify-phases %standard-phases
- (add-after (quote unpack) (quote fix-paths)
+ (add-after 'unpack 'fix-paths
(lambda* (#:key inputs #:allow-other-keys)
(substitute* "src/init.lisp"
(("libgobject-2\\.0\\.so")
@@ -9124,40 +9170,56 @@ approach to templating.")
(sbcl-package->ecl-package sbcl-cl-mysql))
(define-public sbcl-postmodern
- (let ((commit "74469b25bbda990ec9b77e0d0eccdba0cd7e721a")
- (revision "1"))
- (package
- (name "sbcl-postmodern")
- (version (git-version "1.19" revision commit))
- (source
- (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/marijnh/Postmodern")
- (commit commit)))
- (file-name (git-file-name name version))
- (sha256
- (base32 "0im7ymnyxjhn2w74jfg76k5gpr0gl33n31akx33hl28722ljd0hd"))))
- (build-system asdf-build-system/sbcl)
- (native-inputs
- `(("fiveam" ,sbcl-fiveam)))
- (inputs
- `(("alexandria" ,sbcl-alexandria)
- ("bordeaux-threads" ,sbcl-bordeaux-threads)
- ("closer-mop" ,sbcl-closer-mop)
- ("global-vars" ,sbcl-global-vars)
- ("md5" ,sbcl-md5)
- ("split-sequence" ,sbcl-split-sequence)
- ("usocket" ,sbcl-usocket)))
- (arguments
- ;; TODO: Fix missing dependency errors for simple-date/postgres-glue,
- ;; cl-postgres/tests and s-sql/tests.
- `(#:tests? #f
- #:asd-systems '("postmodern"
- "simple-date/postgres-glue")))
- (synopsis "Common Lisp library for interacting with PostgreSQL")
- (description
- "@code{postmodern} is a Common Lisp library for interacting with
+ (package
+ (name "sbcl-postmodern")
+ (version "1.32.8")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/marijnh/Postmodern")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0vr5inbr8dldf6dsl0qj3h2yrnnsayzfwxfzwkn1pk7xbns2l78q"))))
+ (build-system asdf-build-system/sbcl)
+ (native-inputs
+ `(("fiveam" ,sbcl-fiveam)))
+ (inputs
+ `(("alexandria" ,sbcl-alexandria)
+ ("bordeaux-threads" ,sbcl-bordeaux-threads)
+ ("cl-base64" ,sbcl-cl-base64)
+ ("cl-unicode" ,sbcl-cl-unicode)
+ ("closer-mop" ,sbcl-closer-mop)
+ ("global-vars" ,sbcl-global-vars)
+ ("ironclad" ,sbcl-ironclad)
+ ("local-time" ,sbcl-local-time)
+ ("md5" ,sbcl-md5)
+ ("split-sequence" ,sbcl-split-sequence)
+ ("uax-15" ,sbcl-uax-15)
+ ("usocket" ,sbcl-usocket)))
+ (arguments
+ ;; TODO: (Sharlatan-20210114T171037+0000) tests still failing but on other
+ ;; step, some functionality in `local-time' prevents passing tests.
+ ;; Error:
+ ;;
+ ;; Can't create directory
+ ;; /gnu/store
+ ;; /4f47agf1kyiz057ppy6x5p98i7mcbfsv-sbcl-local-time-1.0.6-2.a177eb9
+ ;; /lib/common-lisp/sbcl/local-time/src/integration/
+ ;;
+ ;; NOTE: (Sharlatan-20210124T191940+0000): When set env HOME to /tmp above
+ ;; issue is resolved but it required live test database to connect to now.
+ ;; Keep tests switched off.
+ `(#:tests? #f
+ #:asd-systems '("cl-postgres"
+ "s-sql"
+ "postmodern"
+ "simple-date"
+ "simple-date/postgres-glue")))
+ (synopsis "Common Lisp library for interacting with PostgreSQL")
+ (description
+ "@code{postmodern} is a Common Lisp library for interacting with
PostgreSQL databases. It provides the following features:
@itemize
@@ -9167,9 +9229,27 @@ foreign libraries.
@item A syntax for mixing SQL and Lisp code.
@item Convenient support for prepared statements and stored procedures.
@item A metaclass for simple database-access objects.
-@end itemize\n")
- (home-page "https://marijnhaverbeke.nl/postmodern/")
- (license license:zlib))))
+@end itemize\n
+
+This package produces 4 systems: postmodern, cl-postgres, s-sql, simple-date
+
+@code{SIMPLE-DATE} is a very basic implementation of date and time objects, used
+to support storing and retrieving time-related SQL types. It is not loaded by
+default and you can use local-time (which has support for timezones) instead.
+
+@code{S-SQL} is used to compile s-expressions to strings of SQL code, escaping
+any Lisp values inside, and doing as much as possible of the work at compile
+time.
+
+@code{CL-POSTGRES} is the low-level library used for interfacing with a PostgreSQL
+server over a socket.
+
+@code{POSTMODERN} itself is a wrapper around these packages and provides higher
+level functions, a very simple data access object that can be mapped directly to
+database tables and some convient utilities. It then tries to put all these
+things together into a convenient programming interface")
+ (home-page "https://marijnhaverbeke.nl/postmodern/")
+ (license license:zlib)))
(define-public cl-postmodern
(sbcl-package->cl-source-package sbcl-postmodern))
@@ -9179,15 +9259,18 @@ foreign libraries.
(inherit (sbcl-package->ecl-package sbcl-postmodern))
(arguments
`(#:tests? #f
- #:asd-systems '("postmodern"
+ #:asd-systems '("cl-postgres"
+ "s-sql"
+ "postmodern"
+ "simple-date"
"simple-date/postgres-glue")
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'fix-build
(lambda _
(substitute* "cl-postgres.asd"
- (("\\) \"usocket\"")
- " :ecl) \"usocket\""))
+ ((":or :sbcl :allegro :ccl :clisp" all)
+ (string-append all " :ecl")))
#t)))))))
(define-public sbcl-db3
@@ -12113,6 +12196,77 @@ package.")
(define-public ecl-claw-support
(sbcl-package->ecl-package sbcl-claw-support))
+(define-public sbcl-claw
+ (let ((revision "0")
+ (commit "3cd4a96fca95eb9e8d5d069426694669f81b2250"))
+ (package
+ (name "sbcl-claw")
+ (version (git-version "1.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/borodust/claw")
+ (commit commit)))
+ (file-name (git-file-name "claw" version))
+ (sha256
+ (base32 "146yv0hc4hmk72562ssj2d41143pp84dcbd1h7f4nx1c7hf2bb0d"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("alexandria" ,sbcl-alexandria)
+ ("cffi" ,sbcl-cffi)
+ ("cl-json" ,sbcl-cl-json)
+ ("cl-ppcre" ,sbcl-cl-ppcre)
+ ("claw-support" ,sbcl-claw-support)
+ ("local-time" ,sbcl-local-time)
+ ("trivial-features" ,sbcl-trivial-features)))
+ (home-page "https://github.com/borodust/claw")
+ (synopsis "Autowrapper for Common Lisp")
+ (description
+ "This is a Common Lisp autowrapping facility for quickly creating clean
+and lean bindings to C libraries.")
+ (license license:bsd-2))))
+
+(define-public cl-claw
+ (sbcl-package->cl-source-package sbcl-claw))
+
+(define-public ecl-claw
+ (sbcl-package->ecl-package sbcl-claw))
+
+(define-public sbcl-claw-utils
+ (let ((revision "0")
+ (commit "efe25016501973dc369f067a64c7d225802bc56f"))
+ (package
+ (name "sbcl-claw-utils")
+ ;; version is not specified
+ (version (git-version "0.0.0" revision commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/borodust/claw-utils")
+ (commit commit)))
+ (file-name (git-file-name "claw-utils" version))
+ (sha256
+ (base32 "01df3kyf2qs3czi332dnz2s35x2j0fq46vgmsw7wjrrvnqc22mk5"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("alexandria" ,sbcl-alexandria)
+ ("cffi" ,sbcl-cffi)
+ ("claw" ,sbcl-claw)))
+ (home-page "https://github.com/borodust/claw-utils")
+ (synopsis "Utilities for easier autowrapping")
+ (description
+ "This Common Lisp library contains various handy utilties to help
+autowrapping with @code{claw}.")
+ (license license:expat))))
+
+(define-public cl-claw-utils
+ (sbcl-package->cl-source-package sbcl-claw-utils))
+
+(define-public ecl-claw-utils
+ (sbcl-package->ecl-package sbcl-claw-utils))
+
(define-public sbcl-array-operations
(let ((commit "75cbc3b1adb2e3ce2109489753d0f290b071e81b")
(revision "0"))
@@ -12967,3 +13121,531 @@ bringing dynamism to class definition.")
(define-public cl-markdown
(sbcl-package->cl-source-package sbcl-cl-markdown))
+
+(define-public sbcl-magicffi
+ (let ((commit "d88f2f280c31f639e4e05be75215d8a8dce6aef2"))
+ (package
+ (name "sbcl-magicffi")
+ (version (git-version "0.0.0" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/dochang/magicffi/")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0p6ysa92fk34bhxpw7bycbfgw150fv11z9x8jr9xb4lh8cm2hvp6"))))
+ (build-system asdf-build-system/sbcl)
+ (native-inputs
+ `(("alexandria" ,sbcl-alexandria)))
+ (inputs
+ `(("cffi" ,sbcl-cffi)
+ ("ppcre" ,sbcl-cl-ppcre)
+ ("libmagic" ,file)))
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'fix-paths
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((magic (assoc-ref inputs "libmagic")))
+ (substitute* "grovel.lisp"
+ (("/usr/include/magic.h")
+ (string-append magic "/include/magic.h")))
+ (substitute* "api.lisp"
+ ((":default \"libmagic\"" all)
+ (string-append ":default \"" magic "/lib/libmagic\"")))))))))
+ (home-page "https://common-lisp.net/project/magicffi/")
+ (synopsis "Common Lisp interface to libmagic based on CFFI")
+ (description
+ "MAGICFFI is a Common Lisp CFFI interface to libmagic(3), the file type
+determination library using @emph{magic} numbers.")
+ (license license:bsd-2))))
+
+(define-public ecl-magicffi
+ (sbcl-package->ecl-package sbcl-magicffi))
+
+(define-public cl-magicffi
+ (sbcl-package->cl-source-package sbcl-magicffi))
+
+(define-public sbcl-shlex
+ (let ((commit "c5616dffca0d4d8ddbc1cd6f37a96d88477b2740"))
+ (package
+ (name "sbcl-shlex")
+ (version (git-version "0.0.0" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/ruricolist/cl-shlex")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1nas024n4wv319bf40aal96g72bgi9nkapj2chywj2cc6r8hzkfg"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("alexandria" ,sbcl-alexandria)
+ ("serapeum" ,sbcl-serapeum)
+ ("ppcre" ,sbcl-cl-ppcre)
+ ("unicode" ,sbcl-cl-unicode)))
+ (home-page "https://github.com/ruricolist/cl-shlex")
+ (synopsis "Common Lisp lexical analyzer for shell-like syntaxes")
+ (description
+ "This library contains a lexer for syntaxes that use shell-like rules
+for quoting and commenting. It is a port of the @code{shlex} module from Python’s
+standard library.")
+ (license license:expat))))
+
+(define-public ecl-shlex
+ (sbcl-package->ecl-package sbcl-shlex))
+
+(define-public cl-shlex
+ (sbcl-package->cl-source-package sbcl-shlex))
+
+(define-public sbcl-cmd
+ (let ((commit "e6a54dbf660bf229c80abc124fa47e7bb6d20c93"))
+ (package
+ (name "sbcl-cmd")
+ (version (git-version "0.0.1" "2" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/ruricolist/cmd/")
+ (commit commit)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "1i0l8ci4cnkx84q4afmpkq51nxah24fqpi6k9kgjbxz6li3zp8hy"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("alexandria" ,sbcl-alexandria)
+ ("coreutils" ,coreutils)
+ ("serapeum" ,sbcl-serapeum)
+ ("shlex" ,sbcl-shlex)
+ ("trivia" ,sbcl-trivia)))
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'fix-paths
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((bin (string-append (assoc-ref inputs "coreutils") "/bin")))
+ (substitute* "cmd.lisp"
+ (("\"env\"") (format #f "\"~a/env\"" bin))
+ (("\"pwd\"") (format #f "\"~a/pwd\"" bin)))))))))
+ (home-page "https://github.com/ruricolist/cmd")
+ (synopsis "Conveniently run external programs from Common Lisp")
+ (description
+ "A utility for running external programs, built on UIOP.
+Cmd is designed to be natural to use, protect against shell interpolation and
+be usable from multi-threaded programs.")
+ (license license:expat))))
+
+(define-public ecl-cmd
+ (sbcl-package->ecl-package sbcl-cmd))
+
+(define-public cl-cmd
+ (sbcl-package->cl-source-package sbcl-cmd))
+
+(define-public sbcl-ppath
+ (let ((commit "eb1a8173b4d1d691ea9a7699412123462f58c3ce"))
+ (package
+ (name "sbcl-ppath")
+ (version (git-version "0.1" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/fourier/ppath/")
+ (commit commit)))
+ (file-name (git-file-name name commit))
+ (sha256
+ (base32 "1c46q9lmzqv14z80d3fwdawgn3pn4922x31fyqvsvbcjm4hd16fb"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("alexandria" ,sbcl-alexandria)
+ ("cffi" ,sbcl-cffi)
+ ("osicat" ,sbcl-osicat)
+ ("ppcre" ,sbcl-cl-ppcre)
+ ("split-sequence" ,sbcl-split-sequence)
+ ("trivial-features" ,sbcl-trivial-features)))
+ (native-inputs
+ `(("cl-fad" ,sbcl-cl-fad)
+ ("prove" ,sbcl-prove)))
+ (home-page "https://github.com/fourier/ppath")
+ (synopsis "Common Lisp's implementation of the Python's os.path module")
+ (description
+ "This library is a path strings manipulation library inspired by
+Python's @code{os.path}. All functionality from @code{os.path} is supported on
+major operation systems.
+
+The philosophy behind is to use simple strings and \"dumb\" string
+manipulation functions to handle paths and filenames. Where possible the
+corresponding OS system functions are called.")
+ (license license:bsd-2))))
+
+(define-public ecl-ppath
+ (sbcl-package->ecl-package sbcl-ppath))
+
+(define-public cl-ppath
+ (sbcl-package->cl-source-package sbcl-ppath))
+
+(define-public sbcl-trivial-escapes
+ (let ((commit "1eca78da2078495d09893be58c28b3aa7b8cc4d1"))
+ (package
+ (name "sbcl-trivial-escapes")
+ (version (git-version "1.2.0" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/williamyaoh/trivial-escapes")
+ (commit commit)))
+ (file-name (git-file-name name commit))
+ (sha256
+ (base32 "0v6h8lk17iqv1qkxgqjyzn8gi6v0hvq2vmfbb01md3zjvjqxn6lr"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("named-readtables" ,sbcl-named-readtables)))
+ (native-inputs
+ `(("fiveam" ,sbcl-fiveam)))
+ (home-page "https://github.com/williamyaoh/trivial-escapes")
+ (synopsis "C-style escape directives for Common Lisp")
+ (description
+ "This Common Lisp library interprets escape characters the same way that
+most other programming language do.
+It provides four readtables. The default one lets you write strings like this:
+@code{#\"This string has\na newline in it!\"}.")
+ (license license:public-domain))))
+
+(define-public ecl-trivial-escapes
+ (sbcl-package->ecl-package sbcl-trivial-escapes))
+
+(define-public cl-trivial-escapes
+ (sbcl-package->cl-source-package sbcl-trivial-escapes))
+
+(define-public sbcl-cl-indentify
+ (let ((commit "eb770f434defa4cd41d84bca822428dfd0dbac53"))
+ (package
+ (name "sbcl-cl-indentify")
+ (version (git-version "0.1" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/yitzchak/cl-indentify")
+ (commit commit)))
+ (file-name (git-file-name name commit))
+ (sha256
+ (base32 "0ha36bhg474vr76vfhr13szc8cfdj1ickg92k1icz791bqaqg67p"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("alexandria" ,sbcl-alexandria)
+ ("command-line-arguments" ,sbcl-command-line-arguments)
+ ("trivial-gray-streams" ,sbcl-trivial-gray-streams)))
+ (native-inputs
+ `(("trivial-escapes" ,sbcl-trivial-escapes)
+ ("rove" ,sbcl-rove)))
+ (home-page "https://github.com/yitzchak/cl-indentify")
+ (synopsis "Code beautifier for Common Lisp")
+ (description
+ "A library and command line utility to automatically indent Common Lisp
+source files.")
+ (license license:expat))))
+
+(define-public ecl-cl-indentify
+ (sbcl-package->ecl-package sbcl-cl-indentify))
+
+(define-public cl-indentify
+ (sbcl-package->cl-source-package sbcl-cl-indentify))
+
+(define-public sbcl-concrete-syntax-tree
+ (let ((commit "abd242a59dadc5452aa9dbc1d313c83ec2c11f46"))
+ (package
+ (name "sbcl-concrete-syntax-tree")
+ (version (git-version "0.0.0" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/s-expressionists/Concrete-Syntax-Tree")
+ (commit commit)))
+ (file-name (git-file-name name commit))
+ (sha256
+ (base32 "1lyrglc3h1if44gxd9cwv90wa90nrdjvb7fry39b1xn8ywdfa7di"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("acclimation" ,sbcl-acclimation)))
+ (home-page "https://github.com/s-expressionists/Concrete-Syntax-Tree")
+ (synopsis "Parse Common Lisp code into a concrete syntax tree")
+ (description
+ "This library is intended to solve the problem of source tracking for
+Common Lisp code.
+
+By \"source tracking\", it is meant that code elements that have a known
+origin in the form of a position in a file or in an editor buffer are
+associated with some kind of information about this origin.
+
+Since the exact nature of such origin information depends on the Common Lisp
+implementation and the purpose of wanting to track that origin, the library
+does not impose a particular structure of this information. Instead, it
+provides utilities for manipulating source code in the form of what is called
+concrete syntax trees (CSTs for short) that preserve this information about
+the origin.")
+ (license license:bsd-2))))
+
+(define-public ecl-concrete-syntax-tree
+ (sbcl-package->ecl-package sbcl-concrete-syntax-tree))
+
+(define-public cl-concrete-syntax-tree
+ (sbcl-package->cl-source-package sbcl-concrete-syntax-tree))
+
+(define-public sbcl-eclector
+ (package
+ (name "sbcl-eclector")
+ (version "0.5.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/s-expressionists/Eclector")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0bwkla0jdp5bg0q1zca5wg22b0nbdmglgax345nrhsf8bdrh47wm"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("acclimation" ,sbcl-acclimation)
+ ("alexandria" ,sbcl-alexandria)
+ ("closer-mop" ,sbcl-closer-mop)
+ ("concrete-syntax-tree" ,sbcl-concrete-syntax-tree)))
+ (native-inputs
+ `(("fiveam" ,sbcl-fiveam)))
+ (arguments
+ '(#:asd-systems '("eclector"
+ "eclector-concrete-syntax-tree")))
+ (home-page "https://s-expressionists.github.io/Eclector/")
+ (synopsis "Highly customizable, portable Common Lisp reader")
+ (description
+ "Eclector is a portable Common Lisp reader that is highly customizable,
+can recover from errors and can return concrete syntax trees.
+
+In contrast to many other reader implementations, eclector can recover from
+most errors in the input supplied to it and continue reading. This capability
+is realized as a restart.
+
+It can also produce instances of the concrete syntax tree classes provided by
+the concrete syntax tree library.")
+ (license license:bsd-2)))
+
+(define-public ecl-eclector
+ (sbcl-package->ecl-package sbcl-eclector))
+
+(define-public cl-eclector
+ (sbcl-package->cl-source-package sbcl-eclector))
+
+(define-public sbcl-jsown
+ (let ((commit "744c4407bef58dfa876d9da0b5c0205d869e7977"))
+ (package
+ (name "sbcl-jsown")
+ (version (git-version "1.0.1" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/madnificent/jsown")
+ (commit commit)))
+ (file-name (git-file-name name commit))
+ (sha256
+ (base32 "0gadvmf1d9bq35s61z76psrsnzwwk12svi66jigf491hv48wigw7"))))
+ (build-system asdf-build-system/sbcl)
+ (home-page "https://github.com/madnificent/jsown")
+ (synopsis "Fast JSON reader / writer library for Common Lisp")
+ (description
+ "@code{jsown} is a high performance Common Lisp JSON parser. Its aim
+is to allow for the fast parsing of JSON objects in Common Lisp. Recently,
+functions and macros have been added to ease the burden of writing and editing
+@code{jsown} objects.
+
+@code{jsown} allows you to parse JSON objects quickly to a modifiable Lisp
+list and write them back. If you only need partial retrieval of objects,
+@code{jsown} allows you to select the keys which you would like to see parsed.
+@code{jsown} also has a JSON writer and some helper methods to alter the JSON
+objects themselves.")
+ (license license:expat))))
+
+(define-public ecl-jsown
+ (sbcl-package->ecl-package sbcl-jsown))
+
+(define-public cl-jsown
+ (sbcl-package->cl-source-package sbcl-jsown))
+
+(define-public sbcl-system-locale
+ (let ((commit "4b334bc2fa45651bcaa28ae7d9331095d6bf0a17"))
+ (package
+ (name "sbcl-system-locale")
+ (version (git-version "1.0.0" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/Shinmera/system-locale/")
+ (commit commit)))
+ (file-name (git-file-name name commit))
+ (sha256
+ (base32 "00p5c053kmgq4ks6l9mxsqz6g3bjcybvkvj0bh3r90qgpkaawm1p"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("documentation-utils" ,sbcl-documentation-utils)))
+ (home-page "https://shinmera.github.io/system-locale/")
+ (synopsis "Get the system's locale and language settings in Common Lisp")
+ (description
+ "This library retrieves locale information configured on the
+system. This is helpful if you want to write applications and libraries that
+display messages in the user's native language.")
+ (license license:zlib))))
+
+(define-public ecl-system-locale
+ (sbcl-package->ecl-package sbcl-system-locale))
+
+(define-public cl-system-locale
+ (sbcl-package->cl-source-package sbcl-system-locale))
+
+(define-public sbcl-language-codes
+ (let ((commit "e7aa0e37cb97a3d37d6bc7316b479d01bff8f42e"))
+ (package
+ (name "sbcl-language-codes")
+ (version (git-version "1.0.0" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/Shinmera/language-codes")
+ (commit commit)))
+ (file-name (git-file-name name commit))
+ (sha256
+ (base32 "0py176ibmsc01n5r0q1bs1ykqf5jwdbh8kx0j1a814l9y51241v0"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("documentation-utils" ,sbcl-documentation-utils)))
+ (home-page "https://shinmera.github.io/language-codes/")
+ (synopsis "Map ISO language codes to language names in Common Lisp")
+ (description
+ "This is a small library providing the ISO-639 language code to
+language name mapping.")
+ (license license:zlib))))
+
+(define-public ecl-language-codes
+ (sbcl-package->ecl-package sbcl-language-codes))
+
+(define-public cl-language-codes
+ (sbcl-package->cl-source-package sbcl-language-codes))
+
+(define-public sbcl-multilang-documentation
+ (let ((commit "59e798a07e949e8957a20927f52aca425d84e4a0"))
+ (package
+ (name "sbcl-multilang-documentation")
+ (version (git-version "1.0.0" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/Shinmera/multilang-documentation")
+ (commit commit)))
+ (file-name (git-file-name name commit))
+ (sha256
+ (base32 "13y5jskx8n2b7kimpfarr8v777w3b7zj5swg1b99nj3hk0843ixw"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("documentation-utils" ,sbcl-documentation-utils)
+ ("language-codes" ,sbcl-language-codes)
+ ("system-locale" ,sbcl-system-locale)))
+ (home-page "https://shinmera.github.io/multilang-documentation/")
+ (synopsis "Add multiple languages support to Common Lisp documentation")
+ (description
+ "This library provides a drop-in replacement function for
+cl:documentation that supports multiple docstrings per-language, allowing you
+to write documentation that can be internationalised.")
+ (license license:zlib))))
+
+(define-public ecl-multilang-documentation
+ (sbcl-package->ecl-package sbcl-multilang-documentation))
+
+(define-public cl-multilang-documentation
+ (sbcl-package->cl-source-package sbcl-multilang-documentation))
+
+(define-public sbcl-trivial-do
+ (let ((commit "03a1729f1e71bad3ebcf6cf098a0cce52dfa1163"))
+ (package
+ (name "sbcl-trivial-do")
+ (version (git-version "0.1" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/yitzchak/trivial-do")
+ (commit commit)))
+ (file-name (git-file-name name commit))
+ (sha256
+ (base32 "1ffva79nkicc7wc8c2ic5nayis3b2rk5sxzj74yjkymkjgbpcrgd"))))
+ (build-system asdf-build-system/sbcl)
+ (home-page "https://github.com/yitzchak/trivial-do")
+ (synopsis "Additional dolist style macros for Common Lisp")
+ (description
+ "Additional dolist style macros for Common Lisp, such as
+@code{doalist}, @code{dohash}, @code{dolist*}, @code{doplist}, @code{doseq}
+and @code{doseq*}.")
+ (license license:zlib))))
+
+(define-public ecl-trivial-do
+ (sbcl-package->ecl-package sbcl-trivial-do))
+
+(define-public cl-trivial-do
+ (sbcl-package->cl-source-package sbcl-trivial-do))
+
+(define-public sbcl-common-lisp-jupyter
+ (let ((commit "61a9a8e7a18e2abd7af7c697ba5146fd19bd9d62"))
+ (package
+ (name "sbcl-common-lisp-jupyter")
+ (version (git-version "0.1" "1" commit))
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/yitzchak/common-lisp-jupyter")
+ (commit commit)))
+ (file-name (git-file-name name commit))
+ (sha256
+ (base32 "0zyzl55l45w9z65ygi5pcwda5w5p1j1bb0p2zg2n5cpv8344dkh2"))))
+ (build-system asdf-build-system/sbcl)
+ (inputs
+ `(("alexandria" ,sbcl-alexandria)
+ ("babel" ,sbcl-babel)
+ ("bordeaux-threads" ,sbcl-bordeaux-threads)
+ ("cl-base64" ,sbcl-cl-base64)
+ ("cl-indentify" ,sbcl-cl-indentify)
+ ("closer-mop" ,sbcl-closer-mop)
+ ("eclector" ,sbcl-eclector)
+ ("ironclad" ,sbcl-ironclad)
+ ("iterate" ,sbcl-iterate)
+ ("jsown" ,sbcl-jsown)
+ ("multilang-documentation" ,sbcl-multilang-documentation)
+ ("pzmq" ,sbcl-pzmq)
+ ("puri" ,sbcl-puri)
+ ("static-vectors" ,sbcl-static-vectors)
+ ("trivial-do" ,sbcl-trivial-do)
+ ("trivial-garbage" ,sbcl-trivial-garbage)
+ ("trivial-gray-streams" ,sbcl-trivial-gray-streams)
+ ("trivial-mimes" ,sbcl-trivial-mimes)))
+ (home-page "https://yitzchak.github.io/common-lisp-jupyter/")
+ (synopsis "Common Lisp kernel for Jupyter")
+ (description
+ "This is a Common Lisp kernel for Jupyter along with a library for
+building Jupyter kernels, based on Maxima-Jupyter which was based on
+@code{cl-jupyter}.")
+ (license license:zlib))))
+
+(define-public ecl-common-lisp-jupyter
+ (sbcl-package->ecl-package sbcl-common-lisp-jupyter))
+
+(define-public cl-common-lisp-jupyter
+ (sbcl-package->cl-source-package sbcl-common-lisp-jupyter))
diff --git a/gnu/packages/lisp.scm b/gnu/packages/lisp.scm
index 9ef37d706b..3c09b0af8a 100644
--- a/gnu/packages/lisp.scm
+++ b/gnu/packages/lisp.scm
@@ -17,6 +17,7 @@
;;; Copyright © 2019, 2020 Guillaume Le Vaillant <glv@posteo.net>
;;; Copyright © 2020 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2020 Zhu Zihao <all_but_last@163.com>
+;;; Copyright © 2021 Sharlatan Hellseher <sharlatanus@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -1083,7 +1084,7 @@ assembler, PEG) is less than 1MB.")
(define-public lisp-repl-core-dumper
(package
(name "lisp-repl-core-dumper")
- (version "0.3.0")
+ (version "0.5.0")
(source
(origin
(method git-fetch)
@@ -1092,7 +1093,7 @@ assembler, PEG) is less than 1MB.")
(commit version)))
(file-name (git-file-name name version))
(sha256
- (base32 "1w7x7d7bnrdj0bd04vnjy7d7sngvcx1yjr4iw429hdd9lzlg8rbg"))))
+ (base32 "1hrilm9lxy7zdidn4wac4yfqryg3hfw0371nanhd7g9bcfjx7n1q"))))
(build-system copy-build-system)
(arguments
'(#:install-plan
@@ -1102,12 +1103,14 @@ assembler, PEG) is less than 1MB.")
(add-before 'install 'fix-utils-path
(lambda* (#:key inputs #:allow-other-keys)
(let* ((coreutils (string-append (assoc-ref inputs "coreutils") "/bin/"))
+ (cat (string-append coreutils "cat"))
(paste (string-append coreutils "paste"))
(sort (string-append coreutils "sort"))
(basename (string-append coreutils "basename"))
(sed (string-append (assoc-ref inputs "sed") "/bin/sed")))
(substitute* "lisp-repl-core-dumper"
(("\\$\\(basename") (string-append "$(" basename))
+ (("\\<cat\\>") cat)
(("\\<paste\\>") paste)
(("\\<sed\\>") sed)
(("\\<sort\\>") sort))))))))
@@ -1126,3 +1129,43 @@ and make for REPLs that start blazing fast.
@item It allows you to include arbitrary libraries.
@end itemize\n")
(license license:gpl3+)))
+
+(define-public buildapp
+ (package
+ (name "buildapp")
+ (version "1.5.6")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/xach/buildapp")
+ (commit (string-append "release-" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "020ipjfqa3l8skd97cj5kq837wgpj28ygfxnkv64cnjrlbnzh161"))))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("sbcl" ,sbcl)))
+ (arguments
+ `(#:tests? #f
+ #:make-flags
+ (list (string-append "DESTDIR=" (assoc-ref %outputs "out")))
+ #:strip-binaries? #f
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure)
+ (add-after 'unpack 'set-home
+ (lambda _
+ (setenv "HOME" "/tmp")
+ #t))
+ (add-before 'install 'create-target-directory
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((bin (string-append (assoc-ref outputs "out") "/bin")))
+ (mkdir-p bin)
+ #t))))))
+ (home-page "https://www.xach.com/lisp/buildapp/")
+ (synopsis "Makes easy to build application executables with SBCL")
+ (description
+ "Buildapp is an application for SBCL or CCL that configures and saves an
+executable Common Lisp image. It is similar to cl-launch and hu.dwim.build. ")
+ (license license:bsd-2)))
diff --git a/gnu/packages/lua.scm b/gnu/packages/lua.scm
index 950090afcb..b029400cb2 100644
--- a/gnu/packages/lua.scm
+++ b/gnu/packages/lua.scm
@@ -3,7 +3,7 @@
;;; Copyright © 2014 Raimon Grau <raimonster@gmail.com>
;;; Copyright © 2014 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2014 Andreas Enge <andreas@enge.fr>
-;;; Copyright © 2016, 2017, 2020 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2016, 2017, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016 doncatnip <gnopap@gmail.com>
;;; Copyright © 2016, 2017, 2019 Clément Lassieur <clement@lassieur.org>
@@ -1066,7 +1066,7 @@ shell command executions.")
(define-public fennel
(package
(name "fennel")
- (version "0.7.0")
+ (version "0.8.0")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -1075,7 +1075,7 @@ shell command executions.")
(file-name (git-file-name name version))
(sha256
(base32
- "17pdcwhfw754fblppw46qphnsvxrn3b7066cz54lv8c0c12iryim"))
+ "1jng33vmnk6mi37l3x2z0plng940jpj7kz1s493ki80z3mkaxjfg"))
(modules '((guix build utils)))
(snippet
'(begin
@@ -1083,18 +1083,36 @@ shell command executions.")
(build-system gnu-build-system)
(arguments
'(#:make-flags (list (string-append "PREFIX=" (assoc-ref %outputs "out")))
+ #:tests? #t ; even on cross-build
#:test-target "test"
#:phases
(modify-phases %standard-phases
(delete 'configure)
+ (add-before 'build 'patch-lua-calls
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((lua (string-append (assoc-ref inputs "lua") "/bin/lua")))
+ (setenv "LUA" lua)
+ (substitute* "old/launcher.lua"
+ (("/usr/bin/env lua") lua))
+ #t)))
(add-after 'build 'patch-fennel
- (lambda _
+ (lambda* (#:key inputs #:allow-other-keys)
(substitute* "fennel"
- (("/usr/bin/env lua") (which "lua")))
+ (("/usr/bin/env .*lua")
+ (string-append (assoc-ref inputs "lua") "/bin/lua")))
+ #t))
+ (delete 'check)
+ (add-after 'install 'check
+ (assoc-ref %standard-phases 'check))
+ (add-after 'install 'install-manpage
+ (lambda* (#:key outputs #:allow-other-keys)
+ (install-file "fennel.1"
+ (string-append (assoc-ref outputs "out")
+ "/share/man/man1"))
#t)))))
(inputs `(("lua" ,lua)))
(home-page "https://fennel-lang.org/")
- (synopsis "A Lisp that compiles to Lua")
+ (synopsis "Lisp that compiles to Lua")
(description
"Fennel is a programming language that brings together the speed,
simplicity, and reach of Lua with the flexibility of a Lisp syntax and macro
diff --git a/gnu/packages/mail.scm b/gnu/packages/mail.scm
index 043f5c5fec..ab3a19578e 100644
--- a/gnu/packages/mail.scm
+++ b/gnu/packages/mail.scm
@@ -456,7 +456,8 @@ aliasing facilities to work just as they would on normal mail.")
(sha256
(base32
"1m4ig69qw4g3lhm4351snmy5i0ch65fqc9vqqdybr6jy21w7w225"))
- (patches (search-patches "mutt-store-references.patch"))))
+ (patches (search-patches "mutt-store-references.patch"
+ "mutt-CVE-2021-3181.patch"))))
(build-system gnu-build-system)
(inputs
`(("cyrus-sasl" ,cyrus-sasl)
@@ -2631,7 +2632,7 @@ converts them to maildir format directories.")
(define-public mblaze
(package
(name "mblaze")
- (version "1.0")
+ (version "1.1")
(source
(origin
(method git-fetch)
@@ -2640,7 +2641,7 @@ converts them to maildir format directories.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "0hxy3mjjv4hg856sl1r15fdmqaw4s9c26b3lidsd5x0kpqy601ai"))))
+ (base32 "1bir977vnqs76g8jgv1yivqw0wk2kn56l3l5r4w2ipix3fir138y"))))
(build-system gnu-build-system)
(native-inputs
`(("perl" ,perl)))
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 7866bcc6eb..eff1480e62 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -104,6 +104,7 @@
#:use-module (gnu packages less)
#:use-module (gnu packages lisp)
#:use-module (gnu packages linux)
+ #:use-module (gnu packages llvm)
#:use-module (gnu packages logging)
#:use-module (gnu packages lua)
#:use-module (gnu packages gnome)
@@ -919,14 +920,14 @@ singular value problems.")
(define-public gnuplot
(package
(name "gnuplot")
- (version "5.2.7")
+ (version "5.4.1")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/gnuplot/gnuplot/"
version "/gnuplot-"
version ".tar.gz"))
(sha256
- (base32 "1vglp4la40f5dpj0zdj63zprrkyjgzy068p35bz5dqxjyczm1zlp"))))
+ (base32 "03jrqs5lvxmbbz2c4g17dn2hrxqwd3hfadk9q8wbkbkyas2h8sbb"))))
(build-system gnu-build-system)
(inputs `(("readline" ,readline)
("cairo" ,cairo)
@@ -938,7 +939,9 @@ singular value problems.")
("texlive" ,texlive-tiny)))
(arguments `(#:configure-flags (list (string-append
"--with-texdir=" %output
- "/texmf-local/tex/latex/gnuplot"))))
+ "/texmf-local/tex/latex/gnuplot"))
+ ;; Plot on a dumb terminal during tests.
+ #:make-flags '("GNUTERM=dumb")))
(home-page "http://www.gnuplot.info")
(synopsis "Command-line driven graphing utility")
(description "Gnuplot is a portable command-line driven graphing
@@ -3502,7 +3505,7 @@ point numbers.")
(define-public wxmaxima
(package
(name "wxmaxima")
- (version "20.06.6")
+ (version "20.12.2")
(source
(origin
(method git-fetch)
@@ -3511,22 +3514,20 @@ point numbers.")
(commit (string-append "Version-" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "054f7n5kx75ng5j20rd5q27n9xxk03mrd7sbxyym1lsswzimqh4w"))))
+ (base32 "1rxnxk7yanb9ac5pxbii6k7gg3b09pbp9rmwvsvgpbrk17mg79r9"))))
(build-system cmake-build-system)
(native-inputs
- `(("gettext" ,gettext-minimal)
- ("xorg-server" ,xorg-server-for-tests)))
- ;; TODO: Add libomp for multithreading support.
- ;; As of right now, enabling libomp causes the imageCells.wxm test to fail.
+ `(("gettext" ,gettext-minimal)))
(inputs
- `(("wxwidgets" ,wxwidgets)
+ `(("libomp" ,libomp)
+ ("wxwidgets" ,wxwidgets)
("maxima" ,maxima)
;; Runtime support.
("adwaita-icon-theme" ,adwaita-icon-theme)
("gtk+" ,gtk+)
("shared-mime-info" ,shared-mime-info)))
(arguments
- `(#:test-target "test"
+ `(#:tests? #f ; tests fail non-deterministically
#:phases
(modify-phases %standard-phases
(add-after 'unpack 'patch-doc-path
@@ -3537,13 +3538,6 @@ point numbers.")
(substitute* "src/Dirstructure.cpp"
(("/doc/wxmaxima-\\%s") "/doc/wxmaxima"))
#t))
- (add-before 'check 'pre-check
- (lambda _
- ;; Tests require a running X server.
- (system "Xvfb :1 &")
- (setenv "DISPLAY" ":1")
- (setenv "HOME" (getcwd))
- #t))
(add-after 'install 'wrap-program
(lambda* (#:key inputs outputs #:allow-other-keys)
(wrap-program (string-append (assoc-ref outputs "out")
diff --git a/gnu/packages/matrix.scm b/gnu/packages/matrix.scm
index 426f26d1e1..8a3a1283fa 100644
--- a/gnu/packages/matrix.scm
+++ b/gnu/packages/matrix.scm
@@ -1,7 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2020 Alex ter Weele <alex.ter.weele@gmail.com>
;;; Copyright © 2020 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
+;;; Copyright © 2020, 2021 Michael Rohleder <mike@rohleder.de>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -61,13 +61,13 @@ an LDAP server.")
(define-public synapse
(package
(name "synapse")
- (version "1.24.0")
+ (version "1.25.0")
(source (origin
(method url-fetch)
(uri (pypi-uri "matrix-synapse" version))
(sha256
(base32
- "0pmn8aqc7jj2xdrwljjz2vwg58hlyxp9axac471pcmg2vqais5yb"))))
+ "0382qcsmgvg24p0xvb37kn3y1kd3bn363kblgwg58iy92df0pga4"))))
(build-system python-build-system)
;; TODO Run tests with ‘PYTHONPATH=. trial3 tests’.
(propagated-inputs
diff --git a/gnu/packages/messaging.scm b/gnu/packages/messaging.scm
index c585326124..1820a146d1 100644
--- a/gnu/packages/messaging.scm
+++ b/gnu/packages/messaging.scm
@@ -24,7 +24,7 @@
;;; Copyright © 2020 Reza Alizadeh Majd <r.majd@pantherx.org>
;;; Copyright © 2020 Jonathan Brielmaier <jonathan.brielmaier@web.de>
;;; Copyright © 2020 Mason Hock <chaosmonk@riseup.net>
-;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
+;;; Copyright © 2020, 2021 Michael Rohleder <mike@rohleder.de>
;;; Copyright © 2020 Raghav Gururajan <raghavgururajan@disroot.org>
;;; Copyright © 2020 Robert Karszniewicz <avoidr@posteo.de>
;;;
@@ -1998,7 +1998,7 @@ is also scriptable and extensible via Guile.")
(define-public libmesode
(package
(name "libmesode")
- (version "0.9.3")
+ (version "0.10.1")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -2007,7 +2007,7 @@ is also scriptable and extensible via Guile.")
(file-name (git-file-name name version))
(sha256
(base32
- "0xzfg1xx88cn36352nnjlb1p7xyw32yqkhjzq10px88iaaqz1vv0"))))
+ "1bxnkhrypgv41qyy1n545kcggmlw1hvxnhwihijhhcf2pxd2s654"))))
(build-system gnu-build-system)
(inputs
`(("expat" ,expat)
@@ -2058,7 +2058,7 @@ are both supported).")
(define-public profanity
(package
(name "profanity")
- (version "0.9.5")
+ (version "0.10.0")
(source
(origin
(method url-fetch)
@@ -2067,7 +2067,7 @@ are both supported).")
version ".tar.gz"))
(sha256
(base32
- "00j9l9v62rz9hprgiy1vrz8v3v59ph18h8kskqxr31fgqvjv5xr3"))))
+ "137z77514fgj2dk13d12g4jrn6gs5k85nwrk1r1kiv7rj0jy61aa"))))
(build-system glib-or-gtk-build-system)
(arguments
`(#:configure-flags
@@ -2354,7 +2354,7 @@ There is support for:
(define-public quaternion
(package
(name "quaternion")
- (version "0.0.9.4e")
+ (version "0.0.9.4f")
(outputs '("out" "debug"))
(source
(origin
@@ -2364,7 +2364,7 @@ There is support for:
(commit version)))
(file-name (git-file-name name version))
(sha256
- (base32 "0hqhg7l6wpkdbzrdjvrbqymmahziri07ba0hvbii7dd2p0h248fv"))))
+ (base32 "1q9ddz4rs02a0w3lwrsjnh59khv38cq9f0kv09vnwvazvayn87ck"))))
(build-system qt-build-system)
(inputs
`(("libqmatrixclient" ,libqmatrixclient)
@@ -2375,7 +2375,7 @@ There is support for:
("qtquickcontrols2" ,qtquickcontrols2)
("qtsvg" ,qtsvg)
("qttools" ,qttools)
- ("xdg-utils", xdg-utils)))
+ ("xdg-utils" ,xdg-utils)))
(arguments
`(#:tests? #f)) ; no tests
(home-page "https://matrix.org/docs/projects/client/quaternion.html")
diff --git a/gnu/packages/mp3.scm b/gnu/packages/mp3.scm
index c32b3cba11..34390d3696 100644
--- a/gnu/packages/mp3.scm
+++ b/gnu/packages/mp3.scm
@@ -82,6 +82,10 @@
;; remove option that is not supported by gcc any more
(substitute* "configure" ((" -fforce-mem") ""))
#t))
+ ;; Normally one should not add a pkg-config file if one is not provided
+ ;; by upstream developers, but Audacity expects a pkg-config file for
+ ;; this package, and other major GNU/Linux distributions already provide
+ ;; such a file.
(add-after 'install 'install-pkg-config
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
@@ -127,6 +131,10 @@ This package contains the library.")
(arguments
`(#:phases
(modify-phases %standard-phases
+ ;; Normally one should not add a pkg-config file if one is not provided
+ ;; by upstream developers, but Audacity expects a pkg-config file for
+ ;; this package, and other major GNU/Linux distributions already provide
+ ;; such a file.
(add-after 'install 'install-pkg-config
(lambda* (#:key outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
diff --git a/gnu/packages/mpd.scm b/gnu/packages/mpd.scm
index 6066913f16..4138f4d2f6 100644
--- a/gnu/packages/mpd.scm
+++ b/gnu/packages/mpd.scm
@@ -10,6 +10,7 @@
;;; Copyright © 2020 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2020 Lars-Dominik Braun <lars@6xq.net>
;;; Copyright © 2020 Simon Streit <simon@netpanic.org>
+;;; Copyright © 2021 Noah Evans <noah@nevans.me>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -104,7 +105,7 @@ interfacing MPD in the C, C++ & Objective C languages.")
(define-public mpd
(package
(name "mpd")
- (version "0.22.3")
+ (version "0.22.4")
(source (origin
(method url-fetch)
(uri
@@ -113,7 +114,7 @@ interfacing MPD in the C, C++ & Objective C languages.")
"/mpd-" version ".tar.xz"))
(sha256
(base32
- "1kvcarqijyw07bdqszjsn62plmncaid5az0q542p6rsygc1i501k"))))
+ "1l4x2jrv04hp4q9gyfg79g78bk68lrd6wd3hysl6y91rln9sj7l9"))))
(build-system meson-build-system)
(arguments
`(#:configure-flags '("-Ddocumentation=enabled")))
@@ -228,7 +229,7 @@ terminal using ncurses.")
(define-public ncmpcpp
(package
(name "ncmpcpp")
- (version "0.9.1")
+ (version "0.9.2")
(source (origin
(method url-fetch)
(uri
@@ -236,7 +237,7 @@ terminal using ncurses.")
version ".tar.bz2"))
(sha256
(base32
- "0x35nd4v31sma8fliqdbn1nxpjyi8hv472318sfb3xbmr4wlm0fb"))))
+ "06rs734n120jp51hr0fkkhxrm7zscbhpdwls0m5b5cccghazdazs"))))
(build-system gnu-build-system)
(inputs `(("libmpdclient" ,libmpdclient)
("boost" ,boost)
@@ -284,20 +285,22 @@ information about tracks being played to a scrobbler, such as Libre.FM.")
(define-public python-mpd2
(package
(name "python-mpd2")
- (version "0.5.5")
+ (version "3.0.1")
(source (origin
(method url-fetch)
(uri (pypi-uri "python-mpd2" version))
(sha256
(base32
- "0laypd7h1j14b4vrmiayqlzdsh2j5hc3zv4l0fqvbrbw9y6763ii"))))
+ "0fxssbmnv44m03shjyvbqslc69b0160702j2s0flgvdxjggrnbjj"))))
(build-system python-build-system)
(arguments
'(#:phases
(modify-phases %standard-phases
(replace 'check
- (lambda _ (invoke "python" "mpd_test.py"))))))
- (native-inputs `(("python-mock" ,python-mock)))
+ (lambda _ (invoke "python" "-m" "pytest" "mpd/tests.py"))))))
+ (native-inputs
+ `(("python-mock" ,python-mock)
+ ("python-pytest" ,python-pytest)))
(home-page "https://github.com/Mic92/python-mpd2")
(synopsis "Python MPD client library")
(description "Python-mpd2 is a Python library which provides a client
@@ -310,7 +313,7 @@ interface for the Music Player Daemon.")
(define-public sonata
(package
(name "sonata")
- (version "1.7b1")
+ (version "1.7.0")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -319,7 +322,7 @@ interface for the Music Player Daemon.")
(file-name (git-file-name name version))
(sha256
(base32
- "1npbxlrg6k154qybfd250nq2p96kxdsdkj9wwnp93gljnii3g8wh"))))
+ "0rl8w7s2asff626clzfvyz987l2k4ml5dg417mqp9v8a962q0v2x"))))
(build-system python-build-system)
(arguments
`(#:modules ((guix build gnu-build-system)
@@ -460,3 +463,56 @@ of the music library will be created to provide a hierarchy of albums and
artists along with albumart.")
(home-page "https://github.com/cdrummond/cantata")
(license license:gpl3+)))
+
+(define-public mcg
+ (package
+ (name "mcg")
+ (version "2.1.2")
+ (source
+ (origin
+ (method git-fetch)
+ (uri
+ (git-reference
+ (url "https://gitlab.com/coderkun/mcg")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "01iqxydssxyi4s644dwl64vm7xhn0szd99hdpywbipvb7kwp5196"))))
+ (build-system python-build-system)
+ (native-inputs
+ `(("glib:bin" ,glib "bin")
+ ("gobject-introspection" ,gobject-introspection)
+ ("pkg-config" ,pkg-config)))
+ (inputs
+ `(("avahi" ,avahi)
+ ("dconf" ,dconf)
+ ("gsettings-desktop-schemas" ,gsettings-desktop-schemas)
+ ("gtk+" ,gtk+)
+ ("python-pygobject" ,python-pygobject)))
+ (arguments
+ `(#:imported-modules ((guix build glib-or-gtk-build-system)
+ ,@%python-build-system-modules)
+ #:modules ((guix build python-build-system)
+ ((guix build glib-or-gtk-build-system) #:prefix glib-or-gtk:)
+ (guix build utils))
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'install 'wrap-program
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((prog (string-append (assoc-ref outputs "out")
+ "/bin/mcg")))
+ (wrap-program prog
+ `("PYTHONPATH" = (,(getenv "PYTHONPATH")))
+ `("GI_TYPELIB_PATH" = (,(getenv "GI_TYPELIB_PATH"))))
+ #t)))
+ (add-after 'wrap-program 'glib-or-gtk-wrap
+ (assoc-ref glib-or-gtk:%standard-phases 'glib-or-gtk-wrap)))))
+ (synopsis "Covergrid for the MPD")
+ (description
+ "mcg (CoverGrid) is a client for the Music Player Daemon (MPD), focusing
+on albums instead of single tracks. It is not intended to be a replacement
+for your favorite MPD client but an addition to get a better
+album-experience.")
+ (home-page "https://gitlab.com/coderkun/mcg")
+ (license license:gpl3+)))
diff --git a/gnu/packages/music.scm b/gnu/packages/music.scm
index fc6c29855d..5902cf56ba 100644
--- a/gnu/packages/music.scm
+++ b/gnu/packages/music.scm
@@ -2296,7 +2296,7 @@ export.")
(define-public pd
(package
(name "pd")
- (version "0.51-3")
+ (version "0.51-4")
(source (origin
(method url-fetch)
(uri
@@ -2304,7 +2304,7 @@ export.")
version ".src.tar.gz"))
(sha256
(base32
- "10cqg387xdpiirak5v9y1lpvcds9bpqz61znx6d1m1hb45n513aw"))))
+ "1hgw1ciwr59f4f9s0h7c2l36wcsn3jsddhr1r9qj97vf64c1ynaj"))))
(build-system gnu-build-system)
(arguments
(let ((wish (string-append "wish" (version-major+minor
@@ -3481,8 +3481,8 @@ websites such as Libre.fm.")
(synopsis "Bandcamp plugin for beets")
(description
"This plugin for beets automatically obtains tag data from @uref{Bandcamp,
- https://bandcamp.com/}. It's also capable of getting song lyrics and album art
- using the beets FetchArt plugin.")
+https://bandcamp.com/}. It's also capable of getting song lyrics and album art
+using the beets FetchArt plugin.")
(license license:gpl2)))
(define-public milkytracker
@@ -4434,7 +4434,7 @@ standalone JACK client and an LV2 plugin is also available.")
(define-public musescore
(package
(name "musescore")
- (version "3.5.2")
+ (version "3.6")
(source
(origin
(method git-fetch)
@@ -4443,7 +4443,7 @@ standalone JACK client and an LV2 plugin is also available.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "0yzps5xxa50cr2i5iv2ycjdywd0mcrdd6hx93l4p8lfljag3w3al"))
+ (base32 "0c9yf8irkism3ffzzpkx636wa6b1r1lgpsb2x63pr0gbi5ss5kyh"))
(modules '((guix build utils)))
(snippet
;; Remove unused libraries.
diff --git a/gnu/packages/musl.scm b/gnu/packages/musl.scm
index 466e472deb..e8c51036d7 100644
--- a/gnu/packages/musl.scm
+++ b/gnu/packages/musl.scm
@@ -28,14 +28,14 @@
(define-public musl
(package
(name "musl")
- (version "1.2.1")
+ (version "1.2.2")
(source (origin
(method url-fetch)
(uri (string-append "https://www.musl-libc.org/releases/"
"musl-" version ".tar.gz"))
(sha256
(base32
- "0jz8fzwgvfyjgxjbpw35ixdglp2apqjvp8m386f6yr4zacc6xbv8"))))
+ "1p8r6bac64y98ln0wzmnixysckq3crca69ys7p16sy9d04i975lv"))))
(build-system gnu-build-system)
(arguments
`(#:tests? #f ; musl has no tests
diff --git a/gnu/packages/nano.scm b/gnu/packages/nano.scm
index 0caa918267..5729448e18 100644
--- a/gnu/packages/nano.scm
+++ b/gnu/packages/nano.scm
@@ -2,7 +2,7 @@
;;; Copyright © 2012 Nikita Karetnikov <nikita@karetnikov.org>
;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 Rene Saavedra <rennes@openmailbox.org>
-;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -30,13 +30,13 @@
(define-public nano
(package
(name "nano")
- (version "5.4")
+ (version "5.5")
(source
(origin
(method url-fetch)
(uri (string-append "mirror://gnu/nano/nano-" version ".tar.xz"))
(sha256
- (base32 "1sc6xl9935k9s9clkv83hapijka4qknfnj6f15c3b1i2n84396gy"))))
+ (base32 "0jkyd3yzcidnvnj1k9bmplzlbd303x6xxblpp5np7zs1kfzq22rr"))))
(build-system gnu-build-system)
(inputs
`(("gettext" ,gettext-minimal)
diff --git a/gnu/packages/networking.scm b/gnu/packages/networking.scm
index fad917a7c0..4e8d91256d 100644
--- a/gnu/packages/networking.scm
+++ b/gnu/packages/networking.scm
@@ -913,14 +913,14 @@ transparently check connection attempts against an access control list.")
(define-public zeromq
(package
(name "zeromq")
- (version "4.3.3")
- (source (origin
- (method url-fetch)
- (uri (string-append "https://github.com/zeromq/libzmq/releases"
- "/download/v" version "/zeromq-" version ".tar.gz"))
- (sha256
- (base32
- "18km71p77jm1w7wly2a5mxvphjb0f2l6s08cg382x55f6zdqb4lx"))))
+ (version "4.3.4")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://github.com/zeromq/libzmq/releases"
+ "/download/v" version "/zeromq-" version ".tar.gz"))
+ (sha256
+ (base32 "1rf3jmi36ms8jh2g5cvi253h43l6xdfq0r7mvp95va7mi4d014y5"))))
(build-system gnu-build-system)
(arguments '(#:configure-flags '("--disable-static")))
(home-page "https://zeromq.org")
@@ -1664,7 +1664,7 @@ reusing frequently-requested web pages.")
(define-public bwm-ng
(package
(name "bwm-ng")
- (version "0.6.2")
+ (version "0.6.3")
(source
(origin
(method git-fetch)
@@ -1673,7 +1673,7 @@ reusing frequently-requested web pages.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "0k906wb4pw3dcqpcwnni78lahzi3bva483f8c17sjykic7as4y5n"))))
+ (base32 "1gpp2l3w479h1w5skjra5xy0gxd24kvmk6i4psbkafnv2399la4k"))))
(build-system gnu-build-system)
(arguments
`(#:phases
@@ -3756,14 +3756,14 @@ thousands of connections is clearly realistic with today's hardware.")
(define-public lldpd
(package
(name "lldpd")
- (version "1.0.7")
+ (version "1.0.8")
(source
(origin
(method url-fetch)
(uri (string-append "https://media.luffy.cx/files/lldpd/lldpd-"
version ".tar.gz"))
(sha256
- (base32 "1qc7k83zpcq27hpjv1lmgrj4la2zy1gspwk5jas43j49siwr3xqx"))
+ (base32 "1vrxr8lgkw7q6ixaaili6ac7i0j0326194s498n2dxihdvkh1llq"))
(modules '((guix build utils)))
(snippet
'(begin
@@ -3849,15 +3849,14 @@ stamps.")
(define-public nbd
(package
(name "nbd")
- (version "3.20")
+ (version "3.21")
(source
(origin
(method url-fetch)
- (uri (string-append "mirror://sourceforge/nbd/nbd/3.20/nbd-" version
- ".tar.xz"))
+ (uri (string-append "mirror://sourceforge/nbd/nbd/" version
+ "/nbd-" version ".tar.xz"))
(sha256
- (base32
- "1kfnyx52nna2mnw264njk1dl2zc8m78sz031yp65mbmpi99v7qg0"))))
+ (base32 "1ydylvvayi4w2d08flji9q03sl7y8hn0c26vsay3nwwikprqls77"))))
(build-system gnu-build-system)
(inputs
`(("glib" ,glib)))
diff --git a/gnu/packages/node.scm b/gnu/packages/node.scm
index 1ecf76b62a..77c47ec71f 100644
--- a/gnu/packages/node.scm
+++ b/gnu/packages/node.scm
@@ -8,6 +8,7 @@
;;; Copyright © 2018, 2019, 2020 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2020 Pierre Langlois <pierre.langlois@gmx.com>
;;; Copyright © 2020 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2021 Simon Tournier <zimon.toutoune@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -220,4 +221,5 @@ devices.")
`(cons* "--shared" "--without-npm" ,flags))
((#:phases phases '%standard-phases)
`(modify-phases ,phases
- (delete 'patch-npm-shebang)))))))
+ (delete 'patch-npm-shebang)
+ (delete 'patch-node-shebang)))))))
diff --git a/gnu/packages/ocaml.scm b/gnu/packages/ocaml.scm
index 2df16e7cd2..8a91a79c36 100644
--- a/gnu/packages/ocaml.scm
+++ b/gnu/packages/ocaml.scm
@@ -18,6 +18,7 @@
;;; Copyright © 2020 Simon Tournier <zimon.toutoune@gmail.com>
;;; Copyright © 2020 divoplade <d@divoplade.fr>
;;; Copyright © 2020 pukkamustard <pukkamustard@posteo.net>
+;;; Copyright © 2021 aecepoglu <aecepoglu@fastmail.fm>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -390,6 +391,69 @@ repository-wide uninstallability checks.")
;; with static-linking exception
(license license:lgpl2.1+)))
+(define-public ocaml-down
+ (package
+ (name "ocaml-down")
+ (version "0.0.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://erratique.ch/software/down/releases/down-"
+ version ".tbz"))
+ (sha256
+ (base32
+ "1nz2f5j17frgr2vrslcz9klmi6w9sm2vqwwwpi33ngcm3rgmsrlg"))))
+ (build-system ocaml-build-system)
+ (arguments
+ `(#:tests? #f ;no tests
+ #:phases
+ (modify-phases %standard-phases
+ (delete 'configure))
+ #:build-flags
+ (list "build" "--lib-dir"
+ (string-append (assoc-ref %outputs "out") "/lib/ocaml/site-lib"))))
+ (native-inputs
+ `(("ocaml-findlib" ,ocaml-findlib)
+ ("ocamlbuild" ,ocamlbuild)
+ ("ocaml-topkg" ,ocaml-topkg)
+ ("opam" ,opam)))
+ (home-page "https://erratique.ch/software/down")
+ (synopsis "OCaml toplevel (REPL) upgrade")
+ (description "Down is an unintrusive user experience upgrade for the
+@command{ocaml} toplevel (REPL).
+
+Simply load the zero dependency @code{down} library in the @command{ocaml}
+toplevel and you get line edition, history, session support and identifier
+completion and documentation with @command{ocp-index}.
+
+Add this to your @file{~/.ocamlinit}:
+
+@example
+#use \"down.top\"
+@end example
+
+You may also need to add this to your @file{~/.ocamlinit} and declare
+the environment variable @code{OCAML_TOPLEVEL_PATH}:
+
+@example
+let () =
+ try Topdirs.dir_directory (Sys.getenv \"OCAML_TOPLEVEL_PATH\")
+ with Not_found -> ()
+@end example
+
+OR
+
+@example
+let () = String.split_on_char ':' (Sys.getenv \"OCAMLPATH\")
+ |> List.filter (fun x -> Filename.check_suffix x \"/site-lib\")
+ |> List.map (fun x -> x ^ \"/toplevel\")
+ (* remove the line below if you don't want to see the text
+ every time you start the toplevel *)
+ |> List.map (fun x -> Printf.printf \"adding directory %s\\n\" x; x)
+ |> List.iter Topdirs.dir_directory;;
+@end example")
+ (license license:isc)))
+
(define-public ocaml-opam-file-format
(package
(name "ocaml-opam-file-format")
@@ -2362,6 +2426,77 @@ string values and to directly encode characters in OCaml Buffer.t values.")
the JSON data format. It can process JSON text without blocking on IO and
without a complete in-memory representation of the data.")
(license license:isc)))
+
+(define-public ocaml-ocp-indent
+ (package
+ (name "ocaml-ocp-indent")
+ (version "1.8.2")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/OCamlPro/ocp-indent")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1dvcl108ir9nqkk4mjm9xhhj4p9dx9bmg8bnms54fizs1x3x8ar3"))))
+ (build-system dune-build-system)
+ (arguments
+ `(#:test-target "tests"
+ #:build-flags (list "--profile=release")))
+ (propagated-inputs
+ `(("ocaml-cmdliner" ,ocaml-cmdliner)))
+ (home-page "https://www.typerex.org/ocp-indent.html")
+ (synopsis "Tool to indent OCaml programs")
+ (description
+ "Ocp-indent is based on an approximate, tolerant OCaml parser
+and a simple stack machine. Presets and configuration options are available,
+with the possibility to set them project-wide. It supports the most common
+syntax extensions, and it is extensible for others.
+
+This package includes:
+
+@itemize
+@item An indentor program, callable from the command-line or from within editors,
+@item Bindings for popular editors,
+@item A library that can be directly used by editor writers, or just for
+ fault-tolerant and approximate parsing.
+@end itemize")
+ (license license:lgpl2.1)))
+
+(define-public ocaml-ocp-index
+ (package
+ (name "ocaml-ocp-index")
+ (version "1.2.1")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/OCamlPro/ocp-index")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "08r7mxdnxmhff37fw4hmrpjgckgi5kaiiiirwp4rmdl594z0h9c8"))))
+ (build-system dune-build-system)
+ (arguments
+ `(#:package "ocp-index"))
+ (propagated-inputs
+ `(("ocaml-ocp-indent" ,ocaml-ocp-indent)
+ ("ocaml-re" ,ocaml-re)
+ ("ocaml-cmdliner" ,ocaml-cmdliner)))
+ (native-inputs
+ `(("ocaml-cppo" ,ocaml-cppo)))
+ (home-page "https://www.typerex.org/ocp-index.html")
+ (synopsis "Lightweight completion and documentation browsing for OCaml libraries")
+ (description "This package includes only the @code{ocp-index} library
+and command-line tool.")
+ ;; All files in libs/ are GNU lgpl2.1
+ ;; For static linking, clause 6 of LGPL is lifted
+ ;; All other files under GNU gpl3
+ (license (list license:gpl3+
+ license:lgpl2.1+))))
(define-public ocaml-ocurl
(package
diff --git a/gnu/packages/onc-rpc.scm b/gnu/packages/onc-rpc.scm
index e4b03b7858..14ff13c038 100644
--- a/gnu/packages/onc-rpc.scm
+++ b/gnu/packages/onc-rpc.scm
@@ -92,7 +92,7 @@ IPv4 and IPv6. ONC RPC is notably used by the network file system (NFS).")
(define-public rpcbind
(package
(name "rpcbind")
- (version "0.2.4")
+ (version "1.2.5")
(source
(origin
(method url-fetch)
@@ -102,7 +102,7 @@ IPv4 and IPv6. ONC RPC is notably used by the network file system (NFS).")
(patches (search-patches "rpcbind-CVE-2017-8779.patch"))
(sha256
(base32
- "0rjc867mdacag4yqvs827wqhkh27135rp9asj06ixhf71m9rljh7"))))
+ "0ynszy5hpc7wbz8xngqwyhgbi9cay73y43izqhcmrcv375l61qrc"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
diff --git a/gnu/packages/package-management.scm b/gnu/packages/package-management.scm
index a6863dc12f..669f69e755 100644
--- a/gnu/packages/package-management.scm
+++ b/gnu/packages/package-management.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015, 2017, 2020 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 Muriithi Frederick Muriuki <fredmanglis@gmail.com>
;;; Copyright © 2017, 2018 Oleg Pykhalov <go.wigust@gmail.com>
@@ -9,7 +9,7 @@
;;; Copyright © 2018, 2019 Rutger Helling <rhelling@mykolab.com>
;;; Copyright © 2018 Sou Bunnbu <iyzsong@member.fsf.org>
;;; Copyright © 2018, 2019 Eric Bavier <bavier@member.fsf.org>
-;;; Copyright © 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2019 Jonathan Brielmaier <jonathan.brielmaier@web.de>
;;; Copyright © 2020 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
@@ -132,8 +132,8 @@
;; Note: the 'update-guix-package.scm' script expects this definition to
;; start precisely like this.
(let ((version "1.2.0")
- (commit "db42ee65bd657bae9b1a598cbdbe86079dc85f81")
- (revision 9))
+ (commit "d4a562ba7ac4549cc2d57eff7f440026a2045f45")
+ (revision 11))
(package
(name "guix")
@@ -149,7 +149,7 @@
(commit commit)))
(sha256
(base32
- "1kizkw6cxh6mhc8kal2fglnhyp1i668b4ilqbxq72slbmf9jr9jl"))
+ "05gkymzfl0fdb2zjyvvn7w15arfnn7fgpbn3bch9r5yc7ldxg868"))
(file-name (string-append "guix-" version "-checkout"))))
(build-system gnu-build-system)
(arguments
@@ -301,6 +301,7 @@ $(prefix)/etc/init.d\n")))
(sqlite (assoc-ref inputs "guile-sqlite3"))
(zlib (assoc-ref inputs "guile-zlib"))
(lzlib (assoc-ref inputs "guile-lzlib"))
+ (zstd (assoc-ref inputs "guile-zstd"))
(git (assoc-ref inputs "guile-git"))
(bs (assoc-ref inputs
"guile-bytestructures"))
@@ -308,7 +309,7 @@ $(prefix)/etc/init.d\n")))
(gnutls (assoc-ref inputs "gnutls"))
(locales (assoc-ref inputs "glibc-utf8-locales"))
(deps (list gcrypt json sqlite gnutls git
- bs ssh zlib lzlib))
+ bs ssh zlib lzlib zstd))
(deps* ,@(if (%current-target-system)
'(deps)
'((cons avahi deps))))
@@ -362,6 +363,7 @@ $(prefix)/etc/init.d\n")))
("guile-sqlite3" ,guile-sqlite3)
("guile-zlib" ,guile-zlib)
("guile-lzlib" ,guile-lzlib)
+ ("guile-zstd" ,guile-zstd)
("guile-ssh" ,guile-ssh)
("guile-git" ,guile-git)
@@ -417,11 +419,19 @@ $(prefix)/etc/init.d\n")))
("guile-ssh" ,guile-ssh)
("guile-git" ,guile-git)
("guile-zlib" ,guile-zlib)
- ("guile-lzlib" ,guile-lzlib)))
+ ("guile-lzlib" ,guile-lzlib)
+ ("guile-zstd" ,guile-zstd)))
(native-search-paths
(list (search-path-specification
(variable "GUIX_EXTENSIONS_PATH")
- (files '("share/guix/extensions")))))
+ (files '("share/guix/extensions")))
+
+ ;; (guix git) and (guix build download) honor this variable whose
+ ;; name comes from OpenSSL.
+ (search-path-specification
+ (variable "SSL_CERT_DIR")
+ (separator #f) ;single entry
+ (files '("etc/ssl/certs")))))
(home-page "https://www.gnu.org/software/guix/")
(synopsis "Functional package manager for installed software packages and versions")
@@ -1130,7 +1140,7 @@ outputs of those builds.")
(define-public guix-jupyter
(package
(name "guix-jupyter")
- (version "0.1.0")
+ (version "0.2.1")
(home-page "https://gitlab.inria.fr/guix-hpc/guix-kernel")
(source (origin
(method git-fetch)
@@ -1138,24 +1148,7 @@ outputs of those builds.")
(commit (string-append "v" version))))
(sha256
(base32
- "01z7jjkc7r7lj6637rcgpz40v8xqqyfp6871h94yvcnwm7zy9h1n"))
- (modules '((guix build utils)))
- (snippet
- '(begin
- ;; Allow builds with Guile 3.0.
- (substitute* "configure.ac"
- (("^GUILE_PKG.*")
- "GUILE_PKG([3.0 2.2])\n"))
-
- ;; Avoid name clash and build failure now that
- ;; 'define-json-mapping' is also provided by Guile-JSON, as
- ;; of version 4.3.
- (substitute* (find-files "." "\\.scm$")
- (("define-json-mapping")
- "define-json-mapping*")
- (("<=>")
- "<->"))
- #t))
+ "1kqwfp5h95s6mirq5nbydsbmlhsinn32grz1ld5mbxvhl6sn2i0j"))
(file-name (string-append "guix-jupyter-" version "-checkout"))))
(build-system gnu-build-system)
(arguments
@@ -1348,14 +1341,14 @@ the boot loader configuration.")
(define-public flatpak
(package
(name "flatpak")
- (version "1.8.2")
+ (version "1.10.1")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/flatpak/flatpak/releases/download/"
version "/flatpak-" version ".tar.xz"))
(sha256
- (base32 "1c45a0k7wx685n5b3ihv7dk0mm2kmwbw7cx8w5g2la62yxfn49kr"))))
+ (base32 "1dywvfpmszvp2wy5hvpzy8z6gz2gzmi9p302njp52p9vpx14ydf1"))))
;; Wrap 'flatpak' so that GIO_EXTRA_MODULES is set, thereby allowing GIO to
;; find the TLS backend in glib-networking.
diff --git a/gnu/packages/password-utils.scm b/gnu/packages/password-utils.scm
index bd411f59d0..2053457375 100644
--- a/gnu/packages/password-utils.scm
+++ b/gnu/packages/password-utils.scm
@@ -9,7 +9,7 @@
;;; Copyright © 2016, 2019, 2020 Alex Griffin <a@ajgrf.com>
;;; Copyright © 2017 Leo Famulari <leo@famulari.name>
;;; Copyright © 2017, 2018 Clément Lassieur <clement@lassieur.org>
-;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Jelle Licht <jlicht@fsfe.org>
;;; Copyright © 2017, 2019 Eric Bavier <bavier@member.fsf.org>
;;; Copyright © 2017, 2020 Nicolas Goaziou <mail@nicolasgoaziou.fr>
@@ -123,7 +123,7 @@ human.")
(define-public keepassxc
(package
(name "keepassxc")
- (version "2.6.2")
+ (version "2.6.3")
(source
(origin
(method url-fetch)
@@ -131,7 +131,7 @@ human.")
"/releases/download/" version "/keepassxc-"
version "-src.tar.xz"))
(sha256
- (base32 "0f3ygnjzjijqmmrvrslwsbnz208jgxp5bwy4p336w3bn1bggl6qh"))))
+ (base32 "1lgp20597dzj8qn8a71x3a6b549rvqybqx4haywwb09qiznvdq77"))))
(build-system cmake-build-system)
(arguments
'(#:configure-flags '("-DWITH_XC_ALL=YES"
diff --git a/gnu/packages/patches/freebayes-devendor-deps.patch b/gnu/packages/patches/freebayes-devendor-deps.patch
new file mode 100644
index 0000000000..7e84666b85
--- /dev/null
+++ b/gnu/packages/patches/freebayes-devendor-deps.patch
@@ -0,0 +1,152 @@
+This patch is original to Guix, ongoing work to upstream bits as possible.
+
+From 9acc56db5e7469f5976be38b52ba4993de98ee38 Mon Sep 17 00:00:00 2001
+From: Efraim Flashner <efraim@flashner.co.il>
+Date: Sun, 17 Jan 2021 13:27:17 +0200
+Subject: [PATCH] devendor-dependants
+
+---
+ meson.build | 84 +++++++++++++++++++++++++++++++++++++++++------------
+ 1 file changed, 66 insertions(+), 18 deletions(-)
+
+diff --git a/meson.build b/meson.build
+index f6bf242..bded4af 100644
+--- a/meson.build
++++ b/meson.build
+@@ -9,8 +9,13 @@ project('freebayes', ['cpp', 'c'],
+
+ zlib_dep = dependency('zlib')
+ lzma_dep = dependency('liblzma')
++simde_dep = dependency('simde')
+ bzip2_dep = dependency('bz2lib', required: false)
+ htslib_dep = dependency('htslib', required : false)
++tabixpp_dep = dependency('tabixpp', required : false)
++fastahack_dep = dependency('fastahack', required : false)
++smithwaterman_dep = dependency('smithwaterman', required : false)
++vcflib_dep = dependency('libvcflib', required: false)
+ thread_dep = dependency('threads')
+
+ if htslib_dep.found()
+@@ -59,6 +64,56 @@ else
+ ]
+ endif
+
++if tabixpp_dep.found()
++ tabixpp_includes = ''
++ tabixpp_src = []
++else
++ tabixpp_includes = [
++ 'vcflib/tabixpp',
++ ]
++ tabixpp_src = [
++ 'vcflib/tabixpp/tabix.cpp',
++ ]
++endif
++
++if vcflib_dep.found()
++ vcflib_includes = ''
++ vcflib_src = []
++else
++ vcflib_includes = [
++ 'vcflib/src',
++ 'vcflib/multichoose',
++ 'vcflib/filevercmp',
++ ]
++ vcflib_src = [
++ 'vcflib/src/Variant.cpp',
++ ]
++endif
++
++if fastahack_dep.found()
++ fastahack_src = []
++else
++ fastahack_src = [
++ 'vcflib/fastahack/Fasta.cpp',
++ 'vcflib/src/split.cpp',
++ ]
++endif
++
++if smithwaterman_dep.found()
++ smithwaterman_includes = ''
++ smithwaterman_src = []
++else
++ smithwaterman_includes = [
++ 'vcflib/smithwaterman',
++ ]
++ smithwaterman_src = [
++ 'vcflib/smithwaterman/SmithWatermanGotoh.cpp',
++ 'vcflib/smithwaterman/disorder.cpp',
++ 'vcflib/smithwaterman/Repeats.cpp',
++ 'vcflib/smithwaterman/LeftAlign.cpp',
++ 'vcflib/smithwaterman/IndelAllele.cpp',
++ ]
++endif
+
+
+ #
+@@ -105,23 +160,18 @@ seqlib_src = [
+ ]
+
+ vcflib_src = [
+- 'vcflib/tabixpp/tabix.cpp',
+- 'vcflib/src/Variant.cpp',
+- 'vcflib/smithwaterman/SmithWatermanGotoh.cpp',
+- 'vcflib/smithwaterman/disorder.cpp',
+- 'vcflib/smithwaterman/Repeats.cpp',
+- 'vcflib/smithwaterman/LeftAlign.cpp',
+- 'vcflib/smithwaterman/IndelAllele.cpp',
++ vcflib_src,
++ tabixpp_src,
++ smithwaterman_src,
+ ]
+
+ bamleftalign_src = [
+ 'src/bamleftalign.cpp',
+ 'src/IndelAllele.cpp',
+ 'contrib/SeqLib/src/BamWriter.cpp',
+- 'vcflib/fastahack/Fasta.cpp',
+- 'vcflib/smithwaterman/LeftAlign.cpp',
+- 'vcflib/smithwaterman/IndelAllele.cpp',
+- 'vcflib/src/split.cpp',
++ fastahack_src,
++ smithwaterman_src,
++ vcflib_src,
+ 'src/LeftAlign.cpp',
+ ]
+
+@@ -134,11 +184,9 @@ incdir = include_directories(
+ 'ttmath',
+ 'contrib',
+ 'contrib/SeqLib',
+- 'vcflib/src',
+- 'vcflib/tabixpp',
+- 'vcflib/smithwaterman',
+- 'vcflib/multichoose',
+- 'vcflib/filevercmp')
++ tabixpp_includes,
++ smithwaterman_includes,
++ vcflib_includes)
+
+ c_args = ['-fpermissive','-w']
+ cpp_args = ['-fpermissive','-w','-Wc++14-compat']
+@@ -152,7 +200,7 @@ executable('freebayes',
+ include_directories : incdir,
+ cpp_args : cpp_args,
+ c_args : c_args,
+- dependencies: [zlib_dep, lzma_dep, htslib_dep, thread_dep],
++ dependencies: [zlib_dep, lzma_dep, simde_dep, htslib_dep, tabixpp_dep, smithwaterman_dep, vcflib_dep, thread_dep],
+ install: true
+ )
+
+@@ -165,7 +213,7 @@ executable('bamleftalign',
+ include_directories : incdir,
+ cpp_args : cpp_args,
+ c_args : c_args,
+- dependencies: [zlib_dep, lzma_dep, htslib_dep, thread_dep],
++ dependencies: [zlib_dep, lzma_dep, simde_dep, htslib_dep, tabixpp_dep, fastahack_dep, smithwaterman_dep, vcflib_dep, thread_dep],
+ install: true
+ )
+
+--
+2.30.0
+
diff --git a/gnu/packages/patches/guile-2.2-skip-so-test.patch b/gnu/packages/patches/guile-2.2-skip-so-test.patch
new file mode 100644
index 0000000000..e7c2594e91
--- /dev/null
+++ b/gnu/packages/patches/guile-2.2-skip-so-test.patch
@@ -0,0 +1,23 @@
+Skip 'test-stack-overflow' that crashes when using QEMU transparent emulation.
+
+--- a/test-suite/standalone/Makefile.in 1970-01-01 01:00:01.000000000 +0100
++++ b/test-suite/standalone/Makefile.in 2021-01-11 10:59:31.606269449 +0100
+@@ -102,8 +102,7 @@
+ test-scm-to-latin1-string$(EXEEXT) test-scm-values$(EXEEXT) \
+ test-scm-c-bind-keyword-arguments$(EXEEXT) \
+ test-srfi-4$(EXEEXT) $(am__append_6) $(am__EXEEXT_1) \
+- test-smob-mark$(EXEEXT) test-smob-mark-race$(EXEEXT) \
+- test-stack-overflow
++ test-smob-mark$(EXEEXT) test-smob-mark-race$(EXEEXT)
+ check_PROGRAMS = test-num2integral$(EXEEXT) test-round$(EXEEXT) \
+ test-foreign-object-c$(EXEEXT) test-list$(EXEEXT) \
+ test-unwind$(EXEEXT) test-conversion$(EXEEXT) \
+@@ -1938,7 +1937,7 @@
+ test-command-line-encoding test-command-line-encoding2 \
+ test-language test-guild-compile $(am__append_3) \
+ test-foreign-object-scm test-fast-slot-ref test-mb-regexp \
+- test-use-srfi $(am__append_5) test-stack-overflow
++ test-use-srfi $(am__append_5)
+ BUILT_SOURCES = $(am__append_2)
+ EXTRA_DIST = test-import-order-a.scm test-import-order-b.scm \
+ test-import-order-c.scm test-import-order-d.scm \
diff --git a/gnu/packages/patches/idris-disable-test.patch b/gnu/packages/patches/idris-disable-test.patch
new file mode 100644
index 0000000000..ec8c7c8451
--- /dev/null
+++ b/gnu/packages/patches/idris-disable-test.patch
@@ -0,0 +1,19 @@
+The "pkg010" test output depends on the version of optparse-applicative being
+used. The expected output requires optparse-applicative >= 0.15.1.0. Skip
+the test for now.
+
+--- idris-1.3.3/test/TestData.hs 2021-01-19 23:05:24.238958262 -0600
++++ idris-1.3.3/test/TestData.hs 2021-01-19 23:10:33.314390997 -0600
+@@ -212,8 +212,10 @@
+ ( 5, ANY ),
+ ( 6, ANY ),
+ ( 7, ANY ),
+- ( 8, ANY ),
+- ( 10, ANY )]),
++ ( 8, ANY )]),
++-- FIXME: Expected output depends on optparse-applicative version.
++-- See https://github.com/idris-lang/Idris-dev/issues/4896
++-- ( 10, ANY )]),
+ ("prelude", "Prelude",
+ [ ( 1, ANY )]),
+ ("primitives", "Primitive types",
diff --git a/gnu/packages/patches/ipxe-reproducible-geniso.patch b/gnu/packages/patches/ipxe-reproducible-geniso.patch
new file mode 100644
index 0000000000..ff6aa1da94
--- /dev/null
+++ b/gnu/packages/patches/ipxe-reproducible-geniso.patch
@@ -0,0 +1,77 @@
+From 052d24d8217c51c572c2f6cbb4a687be2e8ba52d Mon Sep 17 00:00:00 2001
+From: Brice Waegeneire <brice@waegenei.re>
+Date: Fri, 5 Jun 2020 14:38:43 +0200
+Subject: [PATCH] [geniso] Make it reproducible
+
+Some timestamps get embedded in the generated ISO, making it
+unreproducible so we overwrite those timestamps to be at the UNIX epoch.
+---
+ src/util/geniso | 24 +++++++++++++++++++++---
+ 1 file changed, 21 insertions(+), 3 deletions(-)
+
+diff --git a/src/util/geniso b/src/util/geniso
+index ff090d4a..e032ffb0 100755
+--- a/src/util/geniso
++++ b/src/util/geniso
+@@ -11,6 +11,13 @@ function help() {
+ echo " -o FILE save iso image to file"
+ }
+
++function reset_timestamp() {
++ for f in "$1"/*; do
++ touch -t 197001010100 "$f"
++ done
++ touch -t 197001010100 "$1"
++}
++
+ LEGACY=0
+ FIRST=""
+
+@@ -37,8 +44,9 @@ if [ -z "${OUT}" ]; then
+ exit 1
+ fi
+
+-# There should either be mkisofs or the compatible genisoimage program
+-for command in genisoimage mkisofs; do
++# There should either be mkisofs, xorriso or the compatible genisoimage
++# program
++for command in xorriso genisoimage mkisofs; do
+ if ${command} --version >/dev/null 2>/dev/null; then
+ mkisofs=(${command})
+ break
+@@ -46,8 +54,10 @@ for command in genisoimage mkisofs; do
+ done
+
+ if [ -z "${mkisofs}" ]; then
+- echo "${0}: mkisofs or genisoimage not found, please install or set PATH" >&2
++ echo "${0}: mkisofs, xorriso or genisoimage not found, please install or set PATH" >&2
+ exit 1
++elif [ "$mkisofs" = "xorriso" ]; then
++ mkisofs+=(-as mkisofs)
+ fi
+
+ dir=$(mktemp -d bin/iso.dir.XXXXXX)
+@@ -115,6 +125,8 @@ case "${LEGACY}" in
+ exit 1
+ fi
+
++ reset_timestamp "$dir"
++
+ # generate the iso image
+ "${mkisofs[@]}" -b boot.img -output ${OUT} ${dir}
+ ;;
+@@ -127,6 +139,12 @@ case "${LEGACY}" in
+ cp ${LDLINUX_C32} ${dir}
+ fi
+
++ reset_timestamp "$dir"
++
++ if [ "${mkisofs[0]}" = "xorriso" ]; then
++ mkisofs+=(-isohybrid-mbr "$SYSLINUX_MBR_DISK_PATH")
++ fi
++
+ # generate the iso image
+ "${mkisofs[@]}" -b isolinux.bin -no-emul-boot -boot-load-size 4 -boot-info-table -output ${OUT} ${dir}
+
+--
+2.26.2
diff --git a/gnu/packages/patches/mutt-CVE-2021-3181.patch b/gnu/packages/patches/mutt-CVE-2021-3181.patch
new file mode 100644
index 0000000000..df5214b052
--- /dev/null
+++ b/gnu/packages/patches/mutt-CVE-2021-3181.patch
@@ -0,0 +1,45 @@
+Fix CVE-2021-3181:
+
+https://cve.mitre.org/cgi-bin/cvename.cgi?name=CVE-2021-3181
+
+Patch copied from upstream source repository:
+
+https://gitlab.com/muttmua/mutt/-/commit/c059e20ea4c7cb3ee9ffd3500ffe313ae84b2545
+
+From c059e20ea4c7cb3ee9ffd3500ffe313ae84b2545 Mon Sep 17 00:00:00 2001
+From: Kevin McCarthy <kevin@8t8.us>
+Date: Sun, 17 Jan 2021 10:40:37 -0800
+Subject: [PATCH] Fix memory leak parsing group address.
+
+When there was a group address terminator with no previous addresses,
+an address would be allocated but not attached to the address list.
+
+Change this to only allocate when last exists.
+
+It would be more correct to not allocate at all unless we are inside a
+group list, but I will address that in a separate commit to master.
+---
+ rfc822.c | 5 ++---
+ 1 file changed, 2 insertions(+), 3 deletions(-)
+
+diff --git a/rfc822.c b/rfc822.c
+index 7ff4eaa3..ced619f2 100644
+--- a/rfc822.c
++++ b/rfc822.c
+@@ -587,11 +587,10 @@ ADDRESS *rfc822_parse_adrlist (ADDRESS *top, const char *s)
+ #endif
+
+ /* add group terminator */
+- cur = rfc822_new_address ();
+ if (last)
+ {
+- last->next = cur;
+- last = cur;
++ last->next = rfc822_new_address ();
++ last = last->next;
+ }
+
+ phraselen = 0;
+--
+GitLab
+
diff --git a/gnu/packages/patches/podofo-cmake-3.12.patch b/gnu/packages/patches/podofo-cmake-3.12.patch
deleted file mode 100644
index 0a3c19b21a..0000000000
--- a/gnu/packages/patches/podofo-cmake-3.12.patch
+++ /dev/null
@@ -1,19 +0,0 @@
-The build fails with cmake 3.12.0. This patch will be obsolete with the next
-release.
-
-https://sourceforge.net/p/podofo/tickets/24/attachment/podofo-cmake-3.12.patch
-
-
---- a/test/TokenizerTest/CMakeLists.txt 2018-07-20 18:26:02.921494293 +0200
-+++ b/test/TokenizerTest/CMakeLists.txt 2018-07-20 18:34:53.727136443 +0200
-@@ -2,10 +2,3 @@
- TARGET_LINK_LIBRARIES(TokenizerTest ${PODOFO_LIB} ${PODOFO_LIB_DEPENDS})
- SET_TARGET_PROPERTIES(TokenizerTest PROPERTIES COMPILE_FLAGS "${PODOFO_CFLAGS}")
- ADD_DEPENDENCIES(TokenizerTest ${PODOFO_DEPEND_TARGET})
--
--# Copy the test samples over to the build tree
--ADD_CUSTOM_COMMAND(
-- TARGET TokenizerTest
-- POST_BUILD
-- COMMAND "${CMAKE_COMMAND}" -E copy_directory "${CMAKE_CURRENT_SOURCE_DIR}/objects" "${CMAKE_CURRENT_BINARY_DIR}/objects"
-- )
diff --git a/gnu/packages/patches/r-httpuv-1.5.4-unvendor-libuv.patch b/gnu/packages/patches/r-httpuv-1.5.5-unvendor-libuv.patch
index 0947718059..0947718059 100644
--- a/gnu/packages/patches/r-httpuv-1.5.4-unvendor-libuv.patch
+++ b/gnu/packages/patches/r-httpuv-1.5.5-unvendor-libuv.patch
diff --git a/gnu/packages/patches/tipp10-disable-downloader.patch b/gnu/packages/patches/tipp10-disable-downloader.patch
new file mode 100644
index 0000000000..4917a927f9
--- /dev/null
+++ b/gnu/packages/patches/tipp10-disable-downloader.patch
@@ -0,0 +1,165 @@
+https://salsa.debian.org/debian/tipp10/-/raw/debian/2.1.0-5/debian/patches/disable_downloaders.patch
+
+Author: Reiner Herrmann <reiner@reiner-h.de>
+Description: Disable downloaders
+ This makes porting to Qt5 much easier, as QHttp is no longer available.
+ But the functionality was not enabled anyway or is no longer useful.
+ .
+ - checkversion.h/.cpp:
+ At startup (while loading settings), Tipp10 "phones home" to do an
+ update check (www.tipp10.com/update/version.tipp10v210).
+ For a packaged software and one that is no longer being developed,
+ this does not make much sense.
+ - updatedialog.h/.cpp:
+ Can download newer sqlite database (www.tipp10.com/update/sql.tipp10v210.utf),
+ but this file is no longer available on the server (404).
+ The update action has also not been enabled in the menu, so the update
+ functionality was currently not active:
+ widget/mainwindow.cpp:143: //fileMenu->addAction(updateAction);
+ - downloaddialog.h/.cpp:
+ Allows downloading lessons from user-specified location.
+ But the action (widget/startwidget.cpp -> lessonDownload) has not been part
+ of any menu, so it was also not in use.
+
+--- a/tipp10.pro
++++ b/tipp10.pro
+@@ -15,7 +15,6 @@
+ INCLUDEPATH += .
+ CONFIG += qt
+ QT += sql
+-QT += network
+ RC_FILE += tipp10.rc
+ RESOURCES += tipp10.qrc
+ HEADERS += def/defines.h \
+@@ -36,15 +35,12 @@
+ widget/settingspages.h \
+ widget/lessondialog.h \
+ widget/regexpdialog.h \
+- widget/downloaddialog.h \
+ widget/lessonprintdialog.h \
+ widget/lessonresult.h \
+- widget/updatedialog.h \
+ widget/helpbrowser.h \
+ widget/companylogo.h \
+ widget/errormessage.h \
+ widget/txtmessagedialog.h \
+- widget/checkversion.h \
+ sql/connection.h \
+ sql/lessontablesql.h \
+ sql/chartablesql.h \
+@@ -70,15 +66,12 @@
+ widget/settingspages.cpp \
+ widget/lessondialog.cpp \
+ widget/regexpdialog.cpp \
+- widget/downloaddialog.cpp \
+ widget/lessonprintdialog.cpp \
+ widget/lessonresult.cpp \
+- widget/updatedialog.cpp \
+ widget/helpbrowser.cpp \
+ widget/companylogo.cpp \
+ widget/errormessage.cpp \
+ widget/txtmessagedialog.cpp \
+- widget/checkversion.cpp \
+ sql/lessontablesql.cpp \
+ sql/chartablesql.cpp \
+ sql/trainingsql.cpp \
+--- a/widget/mainwindow.cpp
++++ b/widget/mainwindow.cpp
+@@ -41,11 +41,9 @@
+
+ #include "mainwindow.h"
+ #include "settingsdialog.h"
+-#include "updatedialog.h"
+ #include "def/defines.h"
+ #include "def/errordefines.h"
+ #include "errormessage.h"
+-#include "checkversion.h"
+
+ MainWindow::MainWindow() {
+ trainingStarted = false;
+@@ -214,8 +212,8 @@
+ }
+
+ void MainWindow::showUpdate() {
+- UpdateDialog updateDialog(this);
+- updateDialog.exec();
++ //UpdateDialog updateDialog(this);
++ //updateDialog.exec();
+ // Fill lesson list after online update
+ startWidget->fillLessonList(false);
+ }
+@@ -486,6 +484,7 @@
+ settings.endGroup();
+
+ settings.beginGroup("general");
++#if 0
+ if (settings.value("check_new_version", true).toBool()) {
+
+ QDate lastVersionCheck = settings.value("last_version_check").toDate();
+@@ -499,6 +498,7 @@
+ }
+ settings.setValue("last_version_check", today);
+ }
++#endif
+ settings.endGroup();
+ }
+
+--- a/widget/settingspages.cpp
++++ b/widget/settingspages.cpp
+@@ -581,7 +581,7 @@
+
+ // Layout of group box vertical
+ QVBoxLayout *layout = new QVBoxLayout;
+- layout->addWidget(checkNewVersion);
++ //layout->addWidget(checkNewVersion);
+ layout->addSpacing(1);
+ layout->addWidget(checkNativeStyle);
+ layout->setMargin(16);
+@@ -610,7 +610,6 @@
+ checkIntelligence->setChecked(settings.value("check_toggle_intelligence", true).toBool());
+ checkLimitLesson->setChecked(settings.value("check_limit_lesson", true).toBool());
+ checkLessonPublish->setChecked(settings.value("check_lesson_publish", true).toBool());
+- checkNewVersion->setChecked(settings.value("check_new_version", true).toBool());
+ checkNativeStyle->setChecked(settings.value("check_native_style", false).toBool());
+ settings.endGroup();
+ }
+@@ -636,7 +635,6 @@
+ settings.setValue("check_limit_lesson", checkLimitLesson->isChecked());
+ settings.setValue("check_lesson_publish", checkLessonPublish->isChecked());
+ settings.setValue("check_native_style", checkNativeStyle->isChecked());
+- settings.setValue("check_new_version", checkNewVersion->isChecked());
+ settings.endGroup();
+
+ return requireRestart;
+--- a/widget/startwidget.cpp
++++ b/widget/startwidget.cpp
+@@ -43,12 +43,10 @@
+
+ #include "startwidget.h"
+ #include "sql/startsql.h"
+-#include "updatedialog.h"
+ #include "def/defines.h"
+ #include "def/errordefines.h"
+ #include "errormessage.h"
+ #include "lessondialog.h"
+-#include "downloaddialog.h"
+ #include "illustrationdialog.h"
+ #include "txtmessagedialog.h"
+
+@@ -1048,7 +1046,7 @@
+ }
+
+ void StartWidget::clickDownloadLesson() {
+-
++#if 0
+ QStringList lessonData;
+
+ DownloadDialog downloadDialog(&lessonData, this);
+@@ -1083,6 +1081,7 @@
+ }
+ }
+ }
++#endif
+ }
+
+ void StartWidget::clickEditLesson() {
diff --git a/gnu/packages/patches/tipp10-qt5.patch b/gnu/packages/patches/tipp10-qt5.patch
new file mode 100644
index 0000000000..34ad5cd708
--- /dev/null
+++ b/gnu/packages/patches/tipp10-qt5.patch
@@ -0,0 +1,69 @@
+https://salsa.debian.org/debian/tipp10/-/raw/debian/2.1.0-5/debian/patches/qt5.patch
+
+Author: Reiner Herrmann <reiner@reiner-h.de>
+Description: Port to Qt5
+Bug-Debian: https://bugs.debian.org/875207
+
+--- a/tipp10.pro
++++ b/tipp10.pro
+@@ -14,6 +14,7 @@
+ DEPENDPATH += .
+ INCLUDEPATH += .
+ CONFIG += qt
++QT += widgets multimedia printsupport
+ QT += sql
+ RC_FILE += tipp10.rc
+ RESOURCES += tipp10.qrc
+--- a/main.cpp
++++ b/main.cpp
+@@ -24,7 +24,6 @@
+ ****************************************************************/
+
+ #include <QApplication>
+-#include <QPlastiqueStyle>
+ #include <QString>
+ #include <QSettings>
+ #include <QCoreApplication>
+@@ -212,7 +211,7 @@
+
+ // Set windows style
+ if (!useNativeStyle) {
+- app.setStyle("plastique");
++ app.setStyle("fusion");
+ }
+
+ // Translation
+--- a/games/abcrainwidget.cpp
++++ b/games/abcrainwidget.cpp
+@@ -235,8 +235,7 @@
+ charballs.last()->wind = (qrand() % 8) + 2;
+ charballs.last()->rad = 0;
+
+- chartext.append(new QGraphicsTextItem(QString(characterTemp),
+- charballs.last(), scene));
++ chartext.append(new QGraphicsTextItem(QString(characterTemp), charballs.last()));
+ chartext.last()->setFont(QFont("Courier", 16, 100));
+ chartext.last()->setPos(-(chartext.last()->boundingRect().width() / 2), -(chartext.last()->boundingRect().height() / 2));
+
+--- a/sql/chartablesql.cpp
++++ b/sql/chartablesql.cpp
+@@ -137,7 +137,7 @@
+ sortColumn(4);
+
+ headerview->setStretchLastSection(true);
+- headerview->setResizeMode(QHeaderView::Interactive);
++ headerview->setSectionResizeMode(QHeaderView::Interactive);
+ headerview->setSortIndicatorShown(true);
+
+ // Resize the columns
+--- a/sql/lessontablesql.cpp
++++ b/sql/lessontablesql.cpp
+@@ -202,7 +202,7 @@
+ sortColumn(-1);
+
+ headerview->setStretchLastSection(true);
+- headerview->setResizeMode(QHeaderView::Interactive);
++ headerview->setSectionResizeMode(QHeaderView::Interactive);
+ headerview->setSortIndicatorShown(true);
+
+ // Resize the columns
diff --git a/gnu/packages/patches/vcflib-use-shared-libraries.patch b/gnu/packages/patches/vcflib-use-shared-libraries.patch
deleted file mode 100644
index e198ec663c..0000000000
--- a/gnu/packages/patches/vcflib-use-shared-libraries.patch
+++ /dev/null
@@ -1,135 +0,0 @@
-This patch is a combination of many of the patches from Debian:
-https://sources.debian.org/src/libvcflib/1.0.1+dfsg-3/debian/patches/
-
----
- Makefile | 63 +++++++++++---------------------------------------------
- 1 file changed, 12 insertions(+), 51 deletions(-)
-
-diff --git a/Makefile b/Makefile
-index 6b13350..be85f22 100644
---- a/Makefile
-+++ b/Makefile
-@@ -114,43 +114,25 @@ BIN_SOURCES = src/vcfecho.cpp \
- src/vcfnull2ref.cpp \
- src/vcfinfosummarize.cpp
-
--# when we can figure out how to build on mac
--# src/vcfsom.cpp
--
- #BINS = $(BIN_SOURCES:.cpp=)
- BINS = $(addprefix $(BIN_DIR)/,$(notdir $(BIN_SOURCES:.cpp=)))
- SHORTBINS = $(notdir $(BIN_SOURCES:.cpp=))
-
--TABIX = tabixpp/tabix.o
--FASTAHACK = fastahack/Fasta.o
--SMITHWATERMAN = smithwaterman/SmithWatermanGotoh.o
--REPEATS = smithwaterman/Repeats.o
--INDELALLELE = smithwaterman/IndelAllele.o
--DISORDER = smithwaterman/disorder.o
--LEFTALIGN = smithwaterman/LeftAlign.o
--FSOM = fsom/fsom.o
- FILEVERCMP = filevercmp/filevercmp.o
-
--# Work out how to find htslib
--# Use the one we ship in tabixpp unless told otherwise by the environment
--HTS_LIB ?= $(VCF_LIB_LOCAL)/tabixpp/htslib/libhts.a
--HTS_INCLUDES ?= -I$(VCF_LIB_LOCAL)/tabixpp/htslib
--HTS_LDFLAGS ?= -L$(VCF_LIB_LOCAL)/tabixpp/htslib -lhts -lbz2 -lm -lz -llzma -pthread
--
--
--INCLUDES = $(HTS_INCLUDES) -I$(INC_DIR)
--LDFLAGS = -L$(LIB_DIR) -lvcflib $(HTS_LDFLAGS) -lpthread -lz -lm -llzma -lbz2
-+INCLUDES = -I$(INC_DIR) $(shell pkg-config --cflags htslib fastahack smithwaterman tabixpp)
-+LDFLAGS = -L$(LIB_DIR) -lvcflib -lpthread -lz -lstdc++ -lm -llzma -lbz2 $(shell pkg-config --libs htslib fastahack smithwaterman tabixpp)
-
-
-
--all: $(OBJECTS) $(BINS) scriptToBin
-+all: $(OBJECTS) $(BINS) scriptToBin libvcflib.a
-
- scriptToBin: $(BINS)
- $(CP) scripts/* $(BIN_DIR)
-
- GIT_VERSION += $(shell git describe --abbrev=4 --dirty --always)
-
--CXXFLAGS = -Ofast -D_FILE_OFFSET_BITS=64 -std=c++0x
-+CXXFLAGS = -Ofast -D_FILE_OFFSET_BITS=64 -std=c++0x -fPIC
- #CXXFLAGS = -O2
- #CXXFLAGS = -pedantic -Wall -Wshadow -Wpointer-arith -Wcast-qual
-
-@@ -168,7 +150,7 @@ profiling:
- gprof:
- $(MAKE) CXXFLAGS="$(CXXFLAGS) -pg" all
-
--$(OBJECTS): $(SOURCES) $(HEADERS) $(TABIX) multichoose pre $(SMITHWATERMAN) $(FILEVERCMP) $(FASTAHACK)
-+$(OBJECTS): $(SOURCES) $(HEADERS) multichoose pre $(FILEVERCMP)
- $(CXX) -c -o $@ src/$(*F).cpp $(INCLUDES) $(LDFLAGS) $(CXXFLAGS) && $(CP) src/*.h* $(VCF_LIB_LOCAL)/$(INC_DIR)/
-
- multichoose: pre
-@@ -177,39 +159,22 @@ multichoose: pre
- intervaltree: pre
- cd intervaltree && $(MAKE) && $(CP) *.h* $(VCF_LIB_LOCAL)/$(INC_DIR)/
-
--$(TABIX): pre
-- cd tabixpp && INCLUDES="$(HTS_INCLUDES)" LIBPATH="-L. $(HTS_LDFLAGS)" HTSLIB="$(HTS_LIB)" $(MAKE) && $(CP) *.h* $(VCF_LIB_LOCAL)/$(INC_DIR)/
--
--$(SMITHWATERMAN): pre
-- cd smithwaterman && $(MAKE) && $(CP) *.h* $(VCF_LIB_LOCAL)/$(INC_DIR)/ && $(CP) *.o $(VCF_LIB_LOCAL)/$(OBJ_DIR)/
--
--$(DISORDER): $(SMITHWATERMAN)
--
--$(REPEATS): $(SMITHWATERMAN)
--
--$(LEFTALIGN): $(SMITHWATERMAN)
--
--$(INDELALLELE): $(SMITHWATERMAN)
--
--$(FASTAHACK): pre
-- cd fastahack && $(MAKE) && $(CP) *.h* $(VCF_LIB_LOCAL)/$(INC_DIR)/ && $(CP) Fasta.o $(VCF_LIB_LOCAL)/$(OBJ_DIR)/
--
--#$(FSOM):
--# cd fsom && $(CXX) $(CXXFLAGS) -c fsom.c -lm
--
- $(FILEVERCMP): pre
- cd filevercmp && make && $(CP) *.h* $(VCF_LIB_LOCAL)/$(INC_DIR)/ && $(CP) *.o $(VCF_LIB_LOCAL)/$(INC_DIR)/
-
- $(SHORTBINS): pre
- $(MAKE) $(BIN_DIR)/$@
-
--$(BINS): $(BIN_SOURCES) libvcflib.a $(OBJECTS) $(SMITHWATERMAN) $(FASTAHACK) $(DISORDER) $(LEFTALIGN) $(INDELALLELE) $(SSW) $(FILEVERCMP) pre intervaltree
-+$(BINS): $(BIN_SOURCES) libvcflib.so $(OBJECTS) $(SSW) $(FILEVERCMP) pre intervaltree
- $(CXX) src/$(notdir $@).cpp -o $@ $(INCLUDES) $(LDFLAGS) $(CXXFLAGS) -DVERSION=\"$(GIT_VERSION)\"
-
--libvcflib.a: $(OBJECTS) $(SMITHWATERMAN) $(REPEATS) $(FASTAHACK) $(DISORDER) $(LEFTALIGN) $(INDELALLELE) $(SSW) $(FILEVERCMP) $(TABIX) pre
-- ar rs libvcflib.a $(OBJECTS) smithwaterman/sw.o $(FASTAHACK) $(SSW) $(FILEVERCMP) $(TABIX)
-+libvcflib.a: $(OBJECTS) $(SSW) $(FILEVERCMP) pre
-+ ar rs libvcflib.a $(OBJECTS) $(SSW) $(FILEVERCMP)
- $(CP) libvcflib.a $(LIB_DIR)
-
-+libvcflib.so: $(OBJECTS) $(SSW) $(FILEVERCMP) pre
-+ $(CXX) -shared -o libvcflib.so $(OBJECTS) $(SSW) $(FILEVERCMP)
-+ $(CP) libvcflib.so $(LIB_DIR)
-
- test: $(BINS)
- @prove -Itests/lib -w tests/*.t
-@@ -230,16 +195,12 @@ clean:
- $(RM) $(BINS) $(OBJECTS)
- $(RM) ssw_cpp.o ssw.o
- $(RM) libvcflib.a
-+ $(RM) libvcflib.so
- $(RM) -r $(BIN_DIR)
- $(RM) -r $(LIB_DIR)
- $(RM) -r $(INC_DIR)
- $(RM) -r $(OBJ_DIR)
-- $(MAKE) clean -C tabixpp
-- $(MAKE) clean -C smithwaterman
-- $(MAKE) clean -C fastahack
- $(MAKE) clean -C multichoose
-- $(MAKE) clean -C fsom
-- $(MAKE) clean -C libVCFH
- $(MAKE) clean -C test
- $(MAKE) clean -C filevercmp
- $(MAKE) clean -C intervaltree
---
-2.28.0
-
diff --git a/gnu/packages/pdf.scm b/gnu/packages/pdf.scm
index 224bd792bd..d03379c113 100644
--- a/gnu/packages/pdf.scm
+++ b/gnu/packages/pdf.scm
@@ -13,7 +13,7 @@
;;; Copyright © 2017, 2018 Leo Famulari <leo@famulari.name>
;;; Copyright © 2017 Alex Vong <alexvong1995@gmail.com>
;;; Copyright © 2017, 2018 Rene Saavedra <pacoon@protonmail.com>
-;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Alex Griffin <a@ajgrf.com>
;;; Copyright © 2019 Ben Sturmfels <ben@sturm.com.au>
;;; Copyright © 2019,2020 Hartmut Goebel <h.goebel@crazy-compilers.com>
@@ -648,15 +648,14 @@ interaction.")
(define-public podofo
(package
(name "podofo")
- (version "0.9.6")
+ (version "0.9.7")
(source (origin
(method url-fetch)
(uri (string-append "mirror://sourceforge/podofo/podofo/" version
"/podofo-" version ".tar.gz"))
(sha256
(base32
- "0wj0y4zcmj4q79wrn3vv3xq4bb0vhhxs8yifafwy9f2sjm83c5p9"))
- (patches (search-patches "podofo-cmake-3.12.patch"))))
+ "1f0yvkx6nf99fp741w2y706d8bs9824x1z2gqm3rdy5fv8bfgwkw"))))
(build-system cmake-build-system)
(native-inputs
`(("cppunit" ,cppunit)
@@ -671,8 +670,8 @@ interaction.")
("openssl" ,openssl)
("zlib" ,zlib)))
(arguments
- `(#:configure-flags '("-DPODOFO_BUILD_SHARED=ON"
- "-DPODOFO_BUILD_STATIC=ON")
+ `(#:configure-flags
+ (list "-DPODOFO_BUILD_SHARED=ON")
#:phases
(modify-phases %standard-phases
(add-before 'configure 'patch
diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm
index 896a474bba..da05f7a95b 100644
--- a/gnu/packages/perl.scm
+++ b/gnu/packages/perl.scm
@@ -11141,6 +11141,39 @@ package takes some liberties with the SDL API, and attempts to adhere to the
spirit of both the SDL and Perl.")
(license license:lgpl2.1)))
+(define-public perl-sgmls
+ (package
+ (name "perl-sgmls")
+ (version "1.1")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "mirror://cpan/authors/id/R/RA/RAAB/SGMLSpm-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "1gdjf3mcz2bxir0l9iljxiz6qqqg3a9gg23y5wjg538w552r432m"))))
+ (build-system perl-build-system)
+ (arguments
+ `(#:phases (modify-phases %standard-phases
+ (add-after 'install 'wrap-script
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (site (string-append out "/lib/perl5/site_perl")))
+ (with-directory-excursion out
+ (rename-file "bin/sgmlspl.pl" "bin/sgmlspl")
+ (wrap-program "bin/sgmlspl"
+ `("PERL5LIB" suffix (,site))))
+ #t))))))
+ (native-inputs
+ `(("perl-module-build" ,perl-module-build)))
+ (home-page "https://metacpan.org/release/RAAB/SGMLSpm-1.1")
+ (synopsis "Perl module for processing SGML parser output")
+ (description "This package contains @code{SGMLS.pm}, a perl5 class library
+for parsing the output from an SGML parser such as OpenSP. It also includes
+the @command{sgmlspl} command, an Perl script showcasing how the library can
+be used.")
+ (license license:gpl2+)))
+
(define-public perl-shell-command
(package
(name "perl-shell-command")
diff --git a/gnu/packages/printers.scm b/gnu/packages/printers.scm
index e03582c47b..9ab9da37fb 100644
--- a/gnu/packages/printers.scm
+++ b/gnu/packages/printers.scm
@@ -1,7 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2018 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2018 Tobias Geerinckx-Rice <me@tobias.gr>
-;;; Copyright © 2019, 2021 Ricardo Wurmus <rekado@elephly.net>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -21,13 +20,9 @@
(define-module (gnu packages printers)
#:use-module (guix packages)
#:use-module (guix git-download)
- #:use-module (guix build-system cmake)
#:use-module (guix build-system gnu)
#:use-module ((guix licenses) #:prefix license:)
- #:use-module (gnu packages compression)
- #:use-module (gnu packages cups)
#:use-module (gnu packages libusb)
- #:use-module (gnu packages ghostscript)
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages qt))
@@ -73,70 +68,3 @@
with Graphtec and Sihouette plotting cutters using an SVG file as its input.")
(home-page "http://robocut.org")
(license license:gpl3+)))
-
-(define-public brlaser
- (let ((commit "9d7ddda8383bfc4d205b5e1b49de2b8bcd9137f1")
- (revision "1"))
- (package
- (name "brlaser")
- (version (git-version "6" revision commit))
- (source (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/pdewacht/brlaser")
- (commit commit)))
- (file-name (git-file-name name version))
- (sha256
- (base32
- "1drh0nk7amn9a8wykki4l9maqa4vy7vwminypfy1712alwj31nd4"))))
- (build-system cmake-build-system)
- (arguments
- `(#:configure-flags
- (list (string-append "-DCUPS_DATA_DIR="
- (assoc-ref %outputs "out")
- "/share/cups")
- (string-append "-DCUPS_SERVER_BIN="
- (assoc-ref %outputs "out")
- "/lib/cups"))))
- (inputs
- `(("ghostscript" ,ghostscript)
- ("cups" ,cups)
- ("zlib" ,zlib)))
- (home-page "https://github.com/pdewacht/brlaser")
- (synopsis "Brother laser printer driver")
- (description "Brlaser is a CUPS driver for Brother laser printers. This
-driver is known to work with these printers:
-
-@enumerate
-@item Brother DCP-1510 series
-@item Brother DCP-1600 series
-@item Brother DCP-7030
-@item Brother DCP-7040
-@item Brother DCP-7055
-@item Brother DCP-7055W
-@item Brother DCP-7060D
-@item Brother DCP-7065DN
-@item Brother DCP-7080
-@item Brother DCP-L2500D series
-@item Brother DCP-L2520D series
-@item Brother DCP-L2540DW series
-@item Brother HL-1110 series
-@item Brother HL-1200 series
-@item Brother HL-2030 series
-@item Brother HL-2140 series
-@item Brother HL-2220 series
-@item Brother HL-2270DW series
-@item Brother HL-5030 series
-@item Brother HL-L2300D series
-@item Brother HL-L2320D series
-@item Brother HL-L2340D series
-@item Brother HL-L2360D series
-@item Brother MFC-1910W
-@item Brother MFC-7240
-@item Brother MFC-7360N
-@item Brother MFC-7365DN
-@item Brother MFC-7840W
-@item Brother MFC-L2710DW series
-@item Lenovo M7605D
-@end enumerate")
- (license license:gpl2+))))
diff --git a/gnu/packages/python-xyz.scm b/gnu/packages/python-xyz.scm
index 2c471fba58..9f5e3ba559 100644
--- a/gnu/packages/python-xyz.scm
+++ b/gnu/packages/python-xyz.scm
@@ -8260,14 +8260,14 @@ PEP 8.")
(define-public python-pep517
(package
(name "python-pep517")
- (version "0.8.2")
+ (version "0.9.1")
(source
(origin
(method url-fetch)
(uri (pypi-uri "pep517" version))
(sha256
(base32
- "17m2bcabx3sr5wjalgzppfx5xahqrwm12zq58h68mm482b7rjqcf"))))
+ "0zqidxah03qpnp6zkg3zd1kmd5f79hhdsfmlc0cldaniy80qddxf"))))
(build-system python-build-system)
(arguments
'(#:phases
@@ -18762,14 +18762,14 @@ implemented using @code{ctypes}.")
(define-public python-userspacefs
(package
(name "python-userspacefs")
- (version "2.0.2")
+ (version "2.0.3")
(source
(origin
(method url-fetch)
(uri (pypi-uri "userspacefs" version))
(sha256
(base32
- "0ayfcz9pjwq7h3ws0qas71842s1wm7dxlmg8dccxl2j6yavpv83f"))))
+ "1v6saf62ml3j63adalvlkj4iavxjbsbapl20b21mn73p7kvn4ayf"))))
(build-system python-build-system)
(propagated-inputs
`(("python-fusepyng" ,python-fusepyng)))
diff --git a/gnu/packages/qt.scm b/gnu/packages/qt.scm
index 526054c896..012f9a106f 100644
--- a/gnu/packages/qt.scm
+++ b/gnu/packages/qt.scm
@@ -1,7 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2013, 2014, 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com>
-;;; Copyright © 2015, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2015, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015, 2016, 2017, 2018, 2019 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016, 2017 Nikita <nikita@n0.is>
;;; Copyright © 2016 Thomas Danckaert <post@thomasdanckaert.be>
@@ -343,16 +343,31 @@ developers using C++ or QML, a CSS & JavaScript like language.")
;; Qt 5: assembler error; see <http://hydra.gnu.org/build/112526>.
(supported-systems (delete "mips64el-linux" %supported-systems))))
+(define (qt5-urls component version)
+ "Return a list of URLs for VERSION of the Qt5 COMPONENT."
+ ;; We can't use a mirror:// scheme because these URLs are not exact copies:
+ ;; the layout differs between them.
+ (list (string-append "https://download.qt.io/official_releases/qt/"
+ (version-major+minor version) "/" version
+ "/submodules/" component "-everywhere-src-"
+ version ".tar.xz")
+ (string-append "https://download.qt.io/archive/qt/"
+ (version-major+minor version) "/" version
+ "/submodules/" component "-everywhere-src-"
+ version ".tar.xz")
+ (let ((directory (string-append "qt5" (string-drop component 2))))
+ (string-append "http://sources.buildroot.net/" directory "/"
+ component "-everywhere-src-" version ".tar.xz"))
+ (string-append "https://distfiles.macports.org/qt5/"
+ component "-everywhere-src-" version ".tar.xz")))
+
(define-public qtbase
(package
(name "qtbase")
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1y70libf2x52lpbqvhz10lpk7nyl1ajjwzjxly9pjdpfj4jsv7wh"))
@@ -610,10 +625,7 @@ developers using C++ or QML, a CSS & JavaScript like language.")
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"0pjqrdmd1991x9h4rl8sf81pkd89hfd5h1a2gp3fjw96pk0w5hwb"))))
@@ -685,10 +697,7 @@ HostData=lib/qt5
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1msk8a0z8rr16hkp2fnv668vf6wayiydqgc2mcklaa04rv3qb0mz"))
@@ -726,10 +735,7 @@ support for MNG, TGA, TIFF and WBMP image formats.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"0gkfzj195v9flwljnqpdz3a532618yn4h2577nlsai56x4p7053h"))))
@@ -750,10 +756,7 @@ from within Qt 5.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1ypj5jpa31rlx8yfw3y9jia212lfnxvnqkvygs6ihjf3lxi23skn"))))
@@ -781,10 +784,7 @@ xmlpatternsvalidator.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"0lancdn7y0lrlmyn5cbdm0izd5yprvd5n77nhkb7a3wl2sbx0066"))))
@@ -825,10 +825,7 @@ with JavaScript and C++.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"185zci61ip1wpjrygcw2m6v55lvninc0b8y2p3jh6qgpf5w35003"))))
@@ -849,10 +846,7 @@ with Bluetooth and NFC.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"0gr399fn5n8j3m9d3vv01vcbr1cb7pw043j04cnnxzrlvn2jvd50"))))
@@ -876,10 +870,7 @@ consume data received from the server, or both.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"0fa81r7bn1mf9ynwsx524a55dx1q0jb4vda6j48ssb4lx7wi201z"))))
@@ -909,10 +900,7 @@ recognition API for devices.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1xbd6kc7i0iablqdkvfrajpi32cbq7j6ajbfyyyalcai1s0mhdqc"))
@@ -960,10 +948,7 @@ set of plugins for interacting with pulseaudio and GStreamer.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1ddfx4nak16xx0zh1kl836zxvpbixmmjyplsmfmg65pqkwi34dqr"))))
@@ -1015,10 +1000,7 @@ compositor libraries.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"17gp5qzg4wdg8qlxk2p3mh8x1vk33rf33wic3fy0cws193bmkiar"))))
@@ -1049,10 +1031,7 @@ interacting with serial ports from within Qt.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"125x6756fjpldqy6wbw6cg7ngjh2016aiq92bchh719z1mf7xsxf"))))
@@ -1084,10 +1063,7 @@ and others.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1h9y634phvvk557mhmf9z4lmxr41rl8x9mqy2lzp31mk8ffffzqj"))))
@@ -1108,10 +1084,7 @@ popular web engines, Qt WebKit 2 and Qt WebEngine.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"0ihlnhv8ldkqz82v3j7j22lrhk17b6ghra8sx85y2agd2ysq5rw1"))))
@@ -1144,10 +1117,7 @@ OpenGL ES 2.0 and can be used in HTML5 canvas elements")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1rw1wibmbxlj6xc86qs3y8h42al1vczqiksyxzaylxs9gqb4d7xy"))))
@@ -1197,10 +1167,7 @@ positioning and geolocation plugins.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1k618f7v6jaj0ygy8d7jvgb8zjr47sn55kiskbdkkizp3z7d12f1"))))
@@ -1225,10 +1192,7 @@ that helps in Qt development.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"0gk74hk488k9ldacxbxcranr3arf8ifqg8kz9nm1rgdgd59p36d2"))
@@ -1249,10 +1213,7 @@ ECMAScript and Qt.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1dczakl868mg0lnwpf082jjc5976ycn879li1vqlgw5ihirzp4y3"))))
@@ -1273,10 +1234,7 @@ can be used to build complete interfaces in Qt Quick.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"06c9vrwvbjmzapmfa25y34lgjkzg57xxbm92nr6wkv5qykjnq6v7"))))
@@ -1298,10 +1256,7 @@ not available.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1r6zfc0qga2ax155js7c8y5rx6vgayf582s921j09mb797v6g3gc"))))
@@ -1325,10 +1280,7 @@ coloring, and many more.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"0p07bg93fdfn4gr2kv38qgnws5znhswajrxdfs8xc9l3i7vi2xn7"))))
@@ -1355,10 +1307,7 @@ and mobile applications targeting TV-like form factors.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1p5771b9hnpchfcdgy0zkhwg09a6xq88934aggp0rij1k85mkfb0"))
@@ -1386,10 +1335,7 @@ also contains functionality to support data models and executable content.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"09rjx53519dfk4qj2gbn3vlxyriasyb747wpg1p11y7jkwqhs4l7"))))
@@ -1406,10 +1352,7 @@ purchasing goods and services.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"049x7z8zcp9jixmdv2fjscy2ggpd6za9hkdbb2bqp2mxjm0hwxg0"))))
@@ -1433,10 +1376,7 @@ selecting one of the charts themes.")
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1zdn3vm0nfy9ny7c783aabp3mhlnqhi9fw2rljn7ibbksmsnasi2"))))
@@ -1460,10 +1400,7 @@ customized by using themes or by adding custom items and labels to them.")
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"11fdgacv4syr8bff2vdw7rb0dg1gcqpdf37hm3pn31d6z91frhpw"))))
@@ -1489,10 +1426,7 @@ implementation of OAuth and OAuth2 authenticathon methods for Qt.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1hngbp0vkr35rpsrac7b9vx6f360v8v2g0fffzm590l8j2ybd0b7"))))
@@ -1526,10 +1460,7 @@ processes or computers.")))
(version "5.15.2")
(source (origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1xc3x3ghnhgchsg1kgj156yg69wn4rwjx8r28i1jd05hxjggn468"))))
@@ -1591,10 +1522,7 @@ using the Enchant spell-checking library.")
(source
(origin
(method url-fetch)
- (uri (string-append "https://download.qt.io/official_releases/qt/"
- (version-major+minor version) "/" version
- "/submodules/" name "-everywhere-src-"
- version ".tar.xz"))
+ (uri (qt5-urls name version))
(sha256
(base32
"1q4idxdm81sx102xc12ixj0xpfx52d6vwvs3jpapnkyq8c7cmby8"))
diff --git a/gnu/packages/radio.scm b/gnu/packages/radio.scm
index 0a4b623360..95e86e560a 100644
--- a/gnu/packages/radio.scm
+++ b/gnu/packages/radio.scm
@@ -2,7 +2,7 @@
;;; Copyright © 2017, 2018, 2019, 2020 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2019, 2020 Christopher Howard <christopher@librehacker.com>
;;; Copyright © 2019, 2020 Evan Straw <evan.straw99@gmail.com>
-;;; Copyright © 2020 Guillaume Le Vaillant <glv@posteo.net>
+;;; Copyright © 2020, 2021 Guillaume Le Vaillant <glv@posteo.net>
;;; Copyright © 2020 Danny Milosavljevic <dannym@scratchpost.org>
;;; Copyright © 2020 Charlie Ritter <chewzerita@posteo.net>
;;; Copyright © 2020, 2021 Tobias Geerinckx-Rice <me@tobias.gr>
@@ -538,7 +538,7 @@ to the fix block above.
(define-public gqrx
(package
(name "gqrx")
- (version "2.13.5")
+ (version "2.14.4")
(source
(origin
(method git-fetch)
@@ -547,7 +547,7 @@ to the fix block above.
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "168wjad5g0ka555hwsciwbj7fqx1c89q59hq1yxj8aiyp5kfcahx"))))
+ (base32 "0m4ncydihz4n4i80c252vk3c5v672yab1jv85n6ndn7a92xv3ilq"))))
(build-system qt-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
@@ -1057,7 +1057,7 @@ their position, altitude, speed, etc.")
(define-public rtl-433
(package
(name "rtl-433")
- (version "20.02")
+ (version "20.11")
(source
(origin
(method git-fetch)
@@ -1066,7 +1066,7 @@ their position, altitude, speed, etc.")
(commit version)))
(file-name (git-file-name name version))
(sha256
- (base32 "11991xky9gawkragdyg27qsf7kw5bhlg7ygvf3fn7ng00x4xbh1z"))))
+ (base32 "093bxjxkg7yf78wqj5gpijbfa2p05ny09qqsj84kzi1svnzsa369"))))
(build-system cmake-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
@@ -1117,3 +1117,33 @@ modes:
@item X10
@end itemize")
(license license:gpl2+)))
+
+(define-public nanovna-saver
+ (package
+ (name "nanovna-saver")
+ (version "0.3.8")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/NanoVNA-Saver/nanovna-saver")
+ (commit (string-append "v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0z83rwpnbbs1n74mx8dgh1d1crp90mannj9vfy161dmy4wzc5kpv"))))
+ (build-system python-build-system)
+ (native-inputs
+ `(("python-cython" ,python-cython)))
+ (inputs
+ `(("python-numpy" ,python-numpy)
+ ("python-pyqt" ,python-pyqt)
+ ("python-pyserial" ,python-pyserial)
+ ("python-scipy" ,python-scipy)))
+ (arguments
+ '(#:tests? #f))
+ (home-page "https://github.com/NanoVNA-Saver/nanovna-saver")
+ (synopsis "GUI for NanoVNA devices")
+ (description
+ "NanoVNA-Saver is a tool for reading, displaying and saving data from the
+NanoVNA vector network analyzers.")
+ (license license:gpl3+)))
diff --git a/gnu/packages/rdf.scm b/gnu/packages/rdf.scm
index be426e102a..0841c1fd8d 100644
--- a/gnu/packages/rdf.scm
+++ b/gnu/packages/rdf.scm
@@ -1,7 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2013, 2014, 2015 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2015, 2016, 2018 Ricardo Wurmus <rekado@elephly.net>
-;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2020 Alexandros Theodotou <alex@zrythm.org>
;;; Copyright © 2020 Pjotr Prins <pjotr.guix@thebird.nl>
@@ -268,14 +268,14 @@ and triple stores.")
(define-public serd
(package
(name "serd")
- (version "0.30.6")
+ (version "0.30.8")
(source (origin
(method url-fetch)
(uri (string-append "https://download.drobilla.net/serd-"
version ".tar.bz2"))
(sha256
(base32
- "1vrprliknw9s0mz99dk7qf8i8xx38dd173q6b60332wxcm6cg8pm"))))
+ "11zs53yx40mv62vxsl15mvdh7s17y5v6lgcgahdvzxgnan7w8bk7"))))
(build-system waf-build-system)
(arguments
`(#:tests? #f ; no check target
@@ -302,14 +302,14 @@ ideal (e.g. in LV2 implementations or embedded applications).")
(define-public sord
(package
(name "sord")
- (version "0.16.6")
+ (version "0.16.8")
(source (origin
(method url-fetch)
(uri (string-append "https://download.drobilla.net/sord-"
version ".tar.bz2"))
(sha256
(base32
- "0i4x49ckdi1d24kwp6rmnf2mz78sncdpq22xhv9kclq8frxg4yk6"))))
+ "052y7zllrg0bzyky2rmrrwnnf16p6bk7q40rq9mgm0mzm8p9sa3w"))))
(build-system waf-build-system)
(arguments
`(#:tests? #f ; no check target
diff --git a/gnu/packages/ruby.scm b/gnu/packages/ruby.scm
index c5b1af79d3..b811cbd2c4 100644
--- a/gnu/packages/ruby.scm
+++ b/gnu/packages/ruby.scm
@@ -5020,10 +5020,16 @@ both CSS3 selector and XPath 1.0 support.")
"1pnyh44qycnf9mzi1j6fywd5fkskv3x7nmsqrrws0rjn5dd4ayfp"))))
(build-system ruby-build-system)
(arguments
- `(#:test-target "spec"))
+ `(#:test-target "spec"
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'remove-git-ls-files
+ (lambda* (#:key outputs #:allow-other-keys)
+ (substitute* "Rakefile"
+ (("git ls-files") "find . -type f"))
+ #t)))))
(native-inputs
- `(("ruby-rspec" ,ruby-rspec)
- ("git" ,git)))
+ `(("ruby-rspec" ,ruby-rspec)))
(synopsis "Retrieve the source code for Ruby methods")
(description "Method_source retrieves the source code for Ruby methods.
Additionally, it can extract source code from Proc and Lambda objects or just
diff --git a/gnu/packages/rust-apps.scm b/gnu/packages/rust-apps.scm
index 3745a8377c..e7a0c4fab2 100644
--- a/gnu/packages/rust-apps.scm
+++ b/gnu/packages/rust-apps.scm
@@ -8,6 +8,7 @@
;;; Copyright © 2020 Gabriel Arazas <foo.dogsquared@gmail.com>
;;; Copyright © 2020, 2021 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2021 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2021 Sharlatan Hellseher <sharlatanus@gmail.ccom>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -33,6 +34,8 @@
#:use-module (gnu packages crates-io)
#:use-module (gnu packages crates-graphics)
#:use-module (gnu packages documentation)
+ #:use-module (gnu packages fontutils)
+ #:use-module (gnu packages gtk)
#:use-module (gnu packages jemalloc)
#:use-module (gnu packages pcre)
#:use-module (gnu packages pkg-config)
@@ -90,6 +93,47 @@ highlighting for a large number of languages, git integration, and automatic
paging.")
(license (list license:expat license:asl2.0))))
+(define-public drill
+ (package
+ (name "drill")
+ (version "0.7.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "drill" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "1m73d7rzi0p5c1hn0081d2235kcyapdza7h0vqf5jhnirpnjn793"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:cargo-inputs
+ (("rust-async-trait" ,rust-async-trait-0.1)
+ ("rust-clap" ,rust-clap-2)
+ ("rust-colored" ,rust-colored-1)
+ ("rust-csv" ,rust-csv-1)
+ ("rust-futures" ,rust-futures-0.3)
+ ("rust-lazy-static" ,rust-lazy-static-1)
+ ("rust-linked-hash-map" ,rust-linked-hash-map-0.5)
+ ("rust-num-cpus" ,rust-num-cpus-1)
+ ("rust-rand" ,rust-rand-0.7)
+ ("rust-regex" ,rust-regex-1)
+ ("rust-reqwest" ,rust-reqwest-0.10)
+ ("rust-serde" ,rust-serde-1)
+ ("rust-serde-json" ,rust-serde-json-1)
+ ("rust-tokio" ,rust-tokio-0.2)
+ ("rust-url" ,rust-url-2)
+ ("rust-yaml-rust" ,rust-yaml-rust-0.4))))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)))
+ (inputs
+ `(("openssl" ,openssl)))
+ (home-page "https://github.com/fcsonline/drill")
+ (synopsis "HTTP load testing application")
+ (description
+ "Drill is a HTTP load testing application written in Rust inspired by
+Ansible syntax. Benchmark files can be written in YAML.")
+ (license license:gpl3)))
+
(define-public exa
(package
(name "exa")
@@ -458,46 +502,117 @@ gitignore rules.")
(base32
"13jzbmjz1bmmfr0i80hw6ar484mgabx3hbpb2ynhk0ddqi0yr58m"))))))
+(define-public tectonic
+ (package
+ (name "tectonic")
+ (version "0.4.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "tectonic" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "16fm2bfvfizrydmirzf0bhr1fidb5slcbvr6150and8yqr8jc4lf"))))
+ (build-system cargo-build-system)
+ (arguments
+ `(#:cargo-inputs
+ (("rust-app-dirs2" ,rust-app-dirs2-2)
+ ("rust-atty" ,rust-atty-0.2)
+ ("rust-byte-unit" ,rust-byte-unit-4)
+ ("rust-cbindgen" ,rust-cbindgen-0.16)
+ ("rust-cc" ,rust-cc-1)
+ ("rust-cfg-if" ,rust-cfg-if-1)
+ ("rust-error-chain" ,rust-error-chain-0.12)
+ ("rust-flate2" ,rust-flate2-1)
+ ("rust-fs2" ,rust-fs2-0.4)
+ ("rust-headers" ,rust-headers-0.2)
+ ("rust-lazy-static" ,rust-lazy-static-1)
+ ("rust-libc" ,rust-libc-0.2)
+ ("rust-md-5" ,rust-md-5-0.9)
+ ("rust-pkg-config" ,rust-pkg-config-0.3)
+ ("rust-regex" ,rust-regex-1)
+ ("rust-reqwest" ,rust-reqwest-0.9)
+ ("rust-serde" ,rust-serde-1)
+ ("rust-sha2" ,rust-sha2-0.9)
+ ("rust-structopt" ,rust-structopt-0.3)
+ ("rust-tectonic-cfg-support" ,rust-tectonic-cfg-support-0.1)
+ ("rust-tectonic-xdv" ,rust-tectonic-xdv-0.1)
+ ("rust-tempfile" ,rust-tempfile-3)
+ ("rust-termcolor" ,rust-termcolor-1)
+ ("rust-toml" ,rust-toml-0.5)
+ ("rust-vcpkg" ,rust-vcpkg-0.2)
+ ("rust-zip" ,rust-zip-0.5))
+ #:cargo-development-inputs
+ (("rust-filetime" ,rust-filetime-0.2)
+ ("rust-futures" ,rust-futures-0.1)
+ ("rust-headers" ,rust-headers-0.2)
+ ("rust-hyper" ,rust-hyper-0.12)
+ ("rust-tempfile" ,rust-tempfile-3)
+ ("rust-tokio" ,rust-tokio-0.1))
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'install 'install-doc
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (doc (string-append out "/share/doc/" ,name "-" ,version)))
+ (copy-recursively "docs/src" doc)
+ #t))))))
+ (native-inputs
+ `(("pkg-config" ,pkg-config)))
+ (inputs
+ `(("fontconfig" ,fontconfig)
+ ("harfbuzz" ,harfbuzz)
+ ("openssl" ,openssl)
+ ("zlib" ,zlib)))
+ (home-page "https://tectonic-typesetting.github.io/")
+ (synopsis "Complete, embeddable TeX/LaTeX engine")
+ (description
+ "This package provides a modernized, complete, embeddable
+TeX/LaTeX engine. Tectonic is forked from the XeTeX extension to the
+classic Web2C implementation of TeX and uses the TeXLive distribution
+of support files.")
+ (license license:expat)))
+
(define-public tokei
(package
(name "tokei")
- (version "10.1.1")
+ (version "12.1.2")
(source
- (origin
- (method url-fetch)
- (uri (crate-uri "tokei" version))
- (file-name
- (string-append name "-" version ".tar.gz"))
- (sha256
- (base32
- "07f5laqw2k9l3k8wrg9h8p2m5d9hkfxngyacwrn3vs7mlnw8l81m"))))
+ (origin
+ (method url-fetch)
+ (uri (crate-uri "tokei" version))
+ (file-name (string-append name "-" version ".tar.gz"))
+ (sha256
+ (base32 "000w549v1bpw7r57xw656p40ywf1gimvxxx5cjnri2js0xg927x4"))))
(build-system cargo-build-system)
(arguments
`(#:cargo-inputs
- (("rust-clap" ,rust-clap-2)
- ("rust-crossbeam-channel" ,rust-crossbeam-channel-0.4)
- ("rust-dirs" ,rust-dirs-2.0)
+ (("rust-aho-corasick" ,rust-aho-corasick-0.7)
+ ("rust-clap" ,rust-clap-2)
+ ("rust-crossbeam-channel" ,rust-crossbeam-channel-0.5)
+ ("rust-dashmap" ,rust-dashmap-4)
+ ("rust-dirs" ,rust-dirs-3)
("rust-encoding-rs-io" ,rust-encoding-rs-io-0.1)
- ("rust-env-logger" ,rust-env-logger-0.7)
+ ("rust-env-logger" ,rust-env-logger-0.8)
("rust-grep-searcher" ,rust-grep-searcher-0.1)
("rust-hex" ,rust-hex-0.4)
("rust-ignore" ,rust-ignore-0.4)
("rust-log" ,rust-log-0.4)
+ ("rust-num-format" ,rust-num-format-0.4)
+ ("rust-once-cell" ,rust-once-cell-1)
+ ("rust-parking-lot" ,rust-parking-lot-0.11)
("rust-rayon" ,rust-rayon-1)
+ ("rust-regex" ,rust-regex-1)
("rust-serde" ,rust-serde-1)
- ("rust-serde-cbor" ,rust-serde-cbor-0.10)
- ("rust-serde-derive" ,rust-serde-derive-1)
+ ("rust-serde-cbor" ,rust-serde-cbor-0.11)
("rust-serde-json" ,rust-serde-json-1)
("rust-serde-yaml" ,rust-serde-yaml-0.8)
+ ("rust-tera" ,rust-tera-1)
("rust-term-size" ,rust-term-size-0.3)
("rust-toml" ,rust-toml-0.5))
#:cargo-development-inputs
- (("rust-git2" ,rust-git2-0.11)
- ("rust-handlebars" ,rust-handlebars-2.0)
- ("rust-ignore" ,rust-ignore-0.4)
- ("rust-lazy-static" ,rust-lazy-static-1)
+ (("rust-git2" ,rust-git2-0.13)
("rust-regex" ,rust-regex-1)
- ("rust-serde-json" ,rust-serde-json-1)
("rust-tempfile" ,rust-tempfile-3))))
(native-inputs
`(("pkg-config" ,pkg-config)))
diff --git a/gnu/packages/samba.scm b/gnu/packages/samba.scm
index 679e2ab869..13e03d7ac7 100644
--- a/gnu/packages/samba.scm
+++ b/gnu/packages/samba.scm
@@ -443,51 +443,48 @@ key-value pair databases and a real LDAP database.")
(license lgpl3+)))
(define-public ppp
- ;; This git commit contains unreleased fixes for CVE-2020-8597.
- (let ((revision "1")
- (commit "8d45443bb5c9372b4c6a362ba2f443d41c5636af"))
- (package
- (name "ppp")
- (version (git-version "2.4.8" revision commit))
- (source (origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/paulusmack/ppp")
- (commit commit)))
- (file-name (git-file-name name version))
- (sha256
- (base32
- "06cf8fb84l3h2zy5da4j7k2j1qjv2gfqn986sf43xgj75605aks2"))))
- (build-system gnu-build-system)
- (arguments
- '(#:tests? #f ; no check target
- #:make-flags '("CC=gcc")
- #:phases
- (modify-phases %standard-phases
- (add-before 'configure 'patch-Makefile
- (lambda* (#:key inputs #:allow-other-keys)
- (let ((libc (assoc-ref inputs "libc"))
- (openssl (assoc-ref inputs "openssl"))
- (libpcap (assoc-ref inputs "libpcap")))
- (substitute* "pppd/Makefile.linux"
- (("/usr/include/crypt\\.h")
- (string-append libc "/include/crypt.h"))
- (("/usr/include/openssl")
- (string-append openssl "/include/openssl"))
- (("/usr/include/pcap-bpf.h")
- (string-append libpcap "/include/pcap-bpf.h")))
- #t))))))
- (inputs
- `(("libpcap" ,libpcap)
- ("openssl" ,(@ (gnu packages tls) openssl))))
- (synopsis "Implementation of the Point-to-Point Protocol")
- (home-page "https://ppp.samba.org/")
- (description
- "The Point-to-Point Protocol (PPP) provides a standard way to establish
+ (package
+ (name "ppp")
+ (version "2.4.9")
+ (source (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/paulusmack/ppp")
+ (commit version)))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32
+ "1bhhksdclsnkw54a517ndrw55q5zljjbh9pcqz1z4a2z2flxpsgk"))))
+ (build-system gnu-build-system)
+ (arguments
+ '(#:tests? #f ; no check target
+ #:make-flags '("CC=gcc")
+ #:phases
+ (modify-phases %standard-phases
+ (add-before 'configure 'patch-Makefile
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((libc (assoc-ref inputs "libc"))
+ (openssl (assoc-ref inputs "openssl"))
+ (libpcap (assoc-ref inputs "libpcap")))
+ (substitute* "pppd/Makefile.linux"
+ (("/usr/include/crypt\\.h")
+ (string-append libc "/include/crypt.h"))
+ (("/usr/include/openssl")
+ (string-append openssl "/include/openssl"))
+ (("/usr/include/pcap-bpf.h")
+ (string-append libpcap "/include/pcap-bpf.h")))
+ #t))))))
+ (inputs
+ `(("libpcap" ,libpcap)
+ ("openssl" ,(@ (gnu packages tls) openssl))))
+ (synopsis "Implementation of the Point-to-Point Protocol")
+ (home-page "https://ppp.samba.org/")
+ (description
+ "The Point-to-Point Protocol (PPP) provides a standard way to establish
a network connection over a serial link. At present, this package supports IP
and IPV6 and the protocols layered above them, such as TCP and UDP.")
- ;; pppd, pppstats and pppdump are under BSD-style notices.
- ;; some of the pppd plugins are GPL'd.
- ;; chat is public domain.
- (license (list bsd-3 bsd-4 gpl2+ public-domain)))))
+ ;; pppd, pppstats and pppdump are under BSD-style notices.
+ ;; some of the pppd plugins are GPL'd.
+ ;; chat is public domain.
+ (license (list bsd-3 bsd-4 gpl2+ public-domain))))
diff --git a/gnu/packages/scribus.scm b/gnu/packages/scribus.scm
index f699824a05..9a6b75333b 100644
--- a/gnu/packages/scribus.scm
+++ b/gnu/packages/scribus.scm
@@ -4,7 +4,7 @@
;;; Copyright © 2017, 2018 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2018 Clément Lassieur <clement@lassieur.org>
;;; Copyright © 2019 Marius Bakke <mbakke@fastmail.com>
-;;; Copyright © 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2020, 2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -46,6 +46,26 @@
#:use-module (gnu packages tls)
#:use-module (gnu packages xml))
+(define podofo-for-scribus
+ (package
+ (inherit podofo)
+ (version "0.9.6")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "mirror://sourceforge/podofo/podofo/" version
+ "/podofo-" version ".tar.gz"))
+ (sha256
+ (base32 "0wj0y4zcmj4q79wrn3vv3xq4bb0vhhxs8yifafwy9f2sjm83c5p9"))
+ (modules '((guix build utils)))
+ (snippet
+ '(begin
+ ;; Fix the build with CMake 3.12.0.
+ (substitute* "test/TokenizerTest/CMakeLists.txt"
+ (("\\$\\{CMAKE_COMMAND\\}")
+ "true"))
+ #t))))))
+
(define-public scribus
(package
(name "scribus")
@@ -96,7 +116,9 @@
("libxml2" ,libxml2)
("libzmf" ,libzmf)
("openssl" ,openssl)
- ("podofo" ,podofo)
+ ;; Scribus 1.5.6.1 does not build with later versions, see
+ ;; <https://bugs.scribus.net/view.php?id=16427>.
+ ("podofo" ,podofo-for-scribus)
("poppler" ,poppler)
("python" ,python) ; need Python library
("qtbase" ,qtbase)
diff --git a/gnu/packages/search.scm b/gnu/packages/search.scm
index 8293d562b3..e261e64a7f 100644
--- a/gnu/packages/search.scm
+++ b/gnu/packages/search.scm
@@ -49,14 +49,14 @@
(define-public xapian
(package
(name "xapian")
- (version "1.4.17")
+ (version "1.4.18")
;; Note: When updating Xapian, remember to update xapian-bindings below.
(source (origin
(method url-fetch)
(uri (string-append "https://oligarchy.co.uk/xapian/" version
"/xapian-core-" version ".tar.xz"))
(sha256
- (base32 "0bjpaavdckl4viznr8gbq476fvg648sj4rks2vacmc51vrb8bsxm"))))
+ (base32 "0xsb4ihf3p767f0zx9p4janwni6r9sg5j6lry0002i8hmnsdnv8r"))))
(build-system gnu-build-system)
(inputs `(("zlib" ,zlib)
("util-linux" ,util-linux "lib")))
@@ -94,7 +94,7 @@ rich set of boolean query operators.")
"/xapian-bindings-" version ".tar.xz"))
(sha256
(base32
- "1lzb739hjfy9ih2c0ircra50h4jr48wxq1fal7sai963w28mv9j8"))))
+ "13ziql8027glgihgvnbsa75vkcn82g83mbihj60zf0njj170clpy"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags '("--with-python3")
diff --git a/gnu/packages/shells.scm b/gnu/packages/shells.scm
index 0b4edbe452..5ee7add8b1 100644
--- a/gnu/packages/shells.scm
+++ b/gnu/packages/shells.scm
@@ -814,14 +814,14 @@ Shell (pdksh).")
(define-public oil
(package
(name "oil")
- (version "0.8.5")
+ (version "0.8.6")
(source
(origin
(method url-fetch)
(uri (string-append "https://www.oilshell.org/download/oil-"
version ".tar.gz"))
(sha256
- (base32 "02pw7x76jzfmk8fqs1k0pz7vwnkal458p93j4if0w0hg36xyx1j2"))))
+ (base32 "1g7ij3va9rlapfyl3zd08g2iffcr6b0n8b0zrp0bnxwvvnysl95h"))))
(build-system gnu-build-system)
(arguments
`(#:strip-binaries? #f ; strip breaks the binary
diff --git a/gnu/packages/skarnet.scm b/gnu/packages/skarnet.scm
index 1fd7d91eb9..51be1a30e8 100644
--- a/gnu/packages/skarnet.scm
+++ b/gnu/packages/skarnet.scm
@@ -2,7 +2,7 @@
;;; Copyright © 2015 Claes Wallin <claes.wallin@greatsinodevelopment.com>
;;; Copyright © 2016 Eric Le Bihan <eric.le.bihan.dev@free.fr>
;;; Copyright © 2017 Z. Ren <zren@dlut.edu.cn>
-;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2020 Oleg Pykhalov <go.wigust@gmail.com>
;;;
;;; This file is part of GNU Guix.
@@ -30,14 +30,14 @@
(define-public skalibs
(package
(name "skalibs")
- (version "2.9.3.0")
+ (version "2.10.0.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://skarnet.org/software/skalibs/skalibs-"
version ".tar.gz"))
(sha256
- (base32 "0i1vg3bh0w3bpj7cv0kzs6q9v2dd8wa2by8h8j39fh1qkl20f6ph"))))
+ (base32 "122xipbxh6awsfdfj37mjc8f3g8ndmmmps4gw5s43mya8wgzib61"))))
(build-system gnu-build-system)
(arguments
'(#:tests? #f ; no tests exist
@@ -62,14 +62,14 @@ and file system operations. It is used by all skarnet.org software.")
(define-public execline
(package
(name "execline")
- (version "2.6.1.1")
+ (version "2.7.0.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://skarnet.org/software/execline/execline-"
version ".tar.gz"))
(sha256
- (base32 "0mmsnai3bkyhng0cxdz6bf7d6b7kbsxs4p39m63215lz6kq0hhrr"))))
+ (base32 "0kl74yix60msgw8k3shhp9ymm80n91yxxqckixj5qbbhmylpnpqd"))))
(build-system gnu-build-system)
(inputs `(("skalibs" ,skalibs)))
(arguments
@@ -104,14 +104,14 @@ complexity.")))
(define-public s6
(package
(name "s6")
- (version "2.9.2.0")
+ (version "2.10.0.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://skarnet.org/software/s6/s6-"
version ".tar.gz"))
(sha256
- (base32 "1pfxx50shncg2s47ic4kp02jh1cxfjq75j3mnxjagyzzz0mbfg9n"))))
+ (base32 "0xzqrd0m3wjklmw1w3gjw5dcdxnhgvxv2r5wd6m2ismw2jprr9k0"))))
(build-system gnu-build-system)
(inputs `(("skalibs" ,skalibs)
("execline" ,execline)))
@@ -150,14 +150,14 @@ functionality with a very small amount of code.")))
(define-public s6-dns
(package
(name "s6-dns")
- (version "2.3.3.0")
+ (version "2.3.4.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://skarnet.org/software/s6-dns/s6-dns-"
version ".tar.gz"))
(sha256
- (base32 "05l74ciflaahlgjpvy1g0slydwqclxgybxrkpvdddd2yzwc5kira"))))
+ (base32 "03s94bc1y2yf0i3v3gh27xz3l2ycf246nb29mrf1zm4v9kdff5fn"))))
(build-system gnu-build-system)
(inputs `(("skalibs" ,skalibs)))
(arguments
@@ -179,14 +179,14 @@ as an alternative to the BIND, djbdns or other DNS clients.")))
(define-public s6-networking
(package
(name "s6-networking")
- (version "2.3.2.0")
+ (version "2.4.0.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://skarnet.org/software/s6-networking/s6-networking-"
version ".tar.gz"))
(sha256
- (base32 "04kxj579pm4n5ifc3gfmrqj74vqqfqc82d69avzkn3yrc226mqxv"))))
+ (base32 "1yqykwfl5jnkxgr6skfj5kzd896pknij0hi5m7lj0r18jpfs5zgq"))))
(build-system gnu-build-system)
(inputs `(("skalibs" ,skalibs)
("execline" ,execline)
@@ -222,14 +222,14 @@ clock synchronization.")))
(define-public s6-rc
(package
(name "s6-rc")
- (version "0.5.1.4")
+ (version "0.5.2.1")
(source
(origin
(method url-fetch)
(uri (string-append "https://skarnet.org/software/s6-rc/s6-rc-"
version ".tar.gz"))
(sha256
- (base32 "07q0ixpwsmj1v08l6vd7qywdg33zzn8vhm21kvp179bapdzs8sdg"))))
+ (base32 "02pszbi440wagx2qp8aqj9mv5wm2qisw9lkq7mbnbnxxw9azlhi8"))))
(build-system gnu-build-system)
(inputs `(("skalibs" ,skalibs)
("execline" ,execline)
@@ -263,7 +263,7 @@ environment.")))
(define-public s6-portable-utils
(package
(name "s6-portable-utils")
- (version "2.2.3.0")
+ (version "2.2.3.1")
(source
(origin
(method url-fetch)
@@ -271,7 +271,7 @@ environment.")))
"https://skarnet.org/software/s6-portable-utils/s6-portable-utils-"
version ".tar.gz"))
(sha256
- (base32 "063zwifigg2b3wsixdcz4h9yvr6fkqssvx0iyfsprjfmm1yapfi9"))))
+ (base32 "1ks1ch5v3p2z8y8wp5fmzzgjrqn2l5sj1sgfp8vv6wy8psd8mrj3"))))
(build-system gnu-build-system)
(inputs `(("skalibs" ,skalibs)))
(arguments
@@ -295,7 +295,7 @@ systems and other constrained environments, but they work everywhere.")))
(define-public s6-linux-init
(package
(name "s6-linux-init")
- (version "1.0.5.1")
+ (version "1.0.6.0")
(source
(origin
(method url-fetch)
@@ -303,7 +303,7 @@ systems and other constrained environments, but they work everywhere.")))
"https://skarnet.org/software/s6-linux-init/s6-linux-init-"
version ".tar.gz"))
(sha256
- (base32 "1gkbjldf4f7i3vmv251f9hw7ma09nh8zkwjmqi2gplpkf7z3i34p"))))
+ (base32 "0kzif3dqhm7h4h7c6npzdbcy7w756222g8ysw116fgb8j385dr6w"))))
(build-system gnu-build-system)
(inputs
`(("execline" ,execline)
@@ -341,7 +341,7 @@ all the details.")))
(define-public s6-linux-utils
(package
(name "s6-linux-utils")
- (version "2.5.1.3")
+ (version "2.5.1.4")
(source
(origin
(method url-fetch)
@@ -349,7 +349,7 @@ all the details.")))
"https://skarnet.org/software/s6-linux-utils/s6-linux-utils-"
version ".tar.gz"))
(sha256
- (base32 "0wbv02zxaami88xbj2zg63kspz05bbplswg0c6ncb5g9khf52wa4"))))
+ (base32 "02gxzc9igid2kf2rvm3v6kc9806mpjmdq7cpanv4cml0ip68vbfq"))))
(build-system gnu-build-system)
(inputs `(("skalibs" ,skalibs)))
(arguments
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index c45544f52e..77cd629882 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Ricardo Wurmus <rekado@elephly.net>
+;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2015 Vicente Vera Parra <vicentemvp@gmail.com>
;;; Copyright © 2016 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2016, 2017, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
@@ -160,14 +160,14 @@ simulation not wholly unlike BUGS. JAGS was written with three aims in mind:
(define-public libxls
(package
(name "libxls")
- (version "1.5.3")
+ (version "1.6.2")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/libxls/libxls/releases/download/"
"v" version "/libxls-" version ".tar.gz"))
(sha256
- (base32 "0rl513wpq5qh7wkmdk4g9c68rzffv3mcbz48p4xyg4969zrx8lnm"))))
+ (base32 "0wg3ymr43aa1j3scyl9x83b2xgg7wilzpil0dj91a8dzji6w7b2x"))))
(build-system gnu-build-system)
(home-page "https://github.com/libxls/libxls")
(synopsis "Read binary (.xls) Excel spreadsheet files")
@@ -522,14 +522,14 @@ code for possible problems.")
(define-public r-foreign
(package
(name "r-foreign")
- (version "0.8-80")
+ (version "0.8-81")
(source
(origin
(method url-fetch)
(uri (cran-uri "foreign" version))
(sha256
(base32
- "0wjdi3qn9famsxmpdyyahidaid0yhxlpx4ad9k8vrxhxd6xspasp"))))
+ "0b4rca1bl8xxna05057hchbwfmgjgx0n140szabpc0raizqzks0s"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/foreign")
(synopsis "Read data stored by other statistics software")
@@ -586,14 +586,14 @@ also flexible enough to handle most nonstandard requirements.")
(define-public r-matrix
(package
(name "r-matrix")
- (version "1.2-18")
+ (version "1.3-2")
(source
(origin
(method url-fetch)
(uri (cran-uri "Matrix" version))
(sha256
(base32
- "06b1rc1vq65b271f2wpzhqkvhng8hwwnvjflzxkng50i52603zzp"))))
+ "0ccmmfd0lbvrhzjzr28k4yfawiywa1m4ics34zyi3rqq23csa2wm"))))
(properties `((upstream-name . "Matrix")))
(build-system r-build-system)
(propagated-inputs
@@ -608,13 +608,13 @@ and operations on them using LAPACK and SuiteSparse.")
(define-public r-nlme
(package
(name "r-nlme")
- (version "3.1-150")
+ (version "3.1-151")
(source
(origin
(method url-fetch)
(uri (cran-uri "nlme" version))
(sha256
- (base32 "18qmbzrmrham8hbdlzsca7w46c5iqighx1ymzggll5s86c4s7kvr"))))
+ (base32 "1jl6x0glpyszy6bkbcggm3f10jl4kldhs5q561k85xcbssx2dim2"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lattice" ,r-lattice)))
@@ -1112,13 +1112,13 @@ using just two functions: melt and dcast (or acast).")
(define-public r-ggplot2
(package
(name "r-ggplot2")
- (version "3.3.2")
+ (version "3.3.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "ggplot2" version))
(sha256
- (base32 "0wsib5qpzn4d0w1ss3x158xmrawkms8vvsfvr3mh40pvd8g2ibad"))))
+ (base32 "1k136k1sr6dq1xvx6gs6gzji6hbnnwnsb5qivsxrblfv90irxhj5"))))
(build-system r-build-system)
(propagated-inputs
`(("r-digest" ,r-digest)
@@ -1175,14 +1175,14 @@ agnes cluster diagrams.")
(define-public r-gdtools
(package
(name "r-gdtools")
- (version "0.2.2")
+ (version "0.2.3")
(source
(origin
(method url-fetch)
(uri (cran-uri "gdtools" version))
(sha256
(base32
- "08njzin0c6biw62j5w30r9j85vr1m2cg4hmv5d76nym860yrlqjf"))))
+ "1p3ip0qwpg8f63jfx0b8vbac6l20ddid8xvxzkfi6i858pybnawp"))))
(build-system r-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
@@ -1268,14 +1268,16 @@ evaluation (NSE) in R.")
(define-public r-dbi
(package
(name "r-dbi")
- (version "1.1.0")
+ (version "1.1.1")
(source (origin
(method url-fetch)
(uri (cran-uri "DBI" version))
(sha256
(base32
- "1r03j9rdcxb9bhxk40dkmy10ikz4yzsxhy3f9k9ix3x577xbfvd9"))))
+ "0i0kfyg43nryyka2bjlgz4x75w965224qp36wz1hl7a2lswb6ajp"))))
(build-system r-build-system)
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "https://github.com/rstats-db/DBI")
(synopsis "R database interface")
(description
@@ -1288,13 +1290,13 @@ R/DBMS implementations.")
(define-public r-bh
(package
(name "r-bh")
- (version "1.72.0-3")
+ (version "1.75.0-0")
(source (origin
(method url-fetch)
(uri (cran-uri "BH" version))
(sha256
(base32
- "1ay8vb6i730lipg8b8g3893vqglhw2kqpc29lwdrxdkb66iw33l8"))))
+ "0nkgvl5qjs2a7jv0ncsrl4fqaw2pdaj7a1pncdv6kp874sci0k5f"))))
(build-system r-build-system)
(home-page "https://github.com/eddelbuettel/bh")
(synopsis "R package providing subset of Boost headers")
@@ -1583,13 +1585,13 @@ R packages that praise their users.")
(define-public r-testthat
(package
(name "r-testthat")
- (version "3.0.0")
+ (version "3.0.1")
(source (origin
(method url-fetch)
(uri (cran-uri "testthat" version))
(sha256
(base32
- "069ixg03r1s85my9dbc9c1261i4gz8fc1mv67whi2l6kpbp4cjzh"))))
+ "1l1s4jgmgbsf711ma5i58ssgkz98an7hijcxvwfz314nf5fc8zr9"))))
(build-system r-build-system)
(propagated-inputs
`(("r-brio" ,r-brio)
@@ -1645,13 +1647,13 @@ defined in different packages.")
(define-public r-rlang
(package
(name "r-rlang")
- (version "0.4.9")
+ (version "0.4.10")
(source (origin
(method url-fetch)
(uri (cran-uri "rlang" version))
(sha256
(base32
- "0qix6jigz3qqjx151fpv1k5hq2miqyakvm3jql2qqsyr9d1028yr"))))
+ "0ximv89f6zymnwms121k1jfvvflrdm3pmmf5xyvz56f1qiq04lq7"))))
(build-system r-build-system)
(home-page "http://rlang.tidyverse.org")
(synopsis "Functions for base types, core R and Tidyverse features")
@@ -1663,14 +1665,14 @@ like tidy evaluation.")
(define-public r-tibble
(package
(name "r-tibble")
- (version "3.0.4")
+ (version "3.0.5")
(source
(origin
(method url-fetch)
(uri (cran-uri "tibble" version))
(sha256
(base32
- "189yyl27mnswk1z51xw6gj3lyxgy6m332jq8xyvwskff57w2w692"))))
+ "142i34h53b8w8jkh3l8y3xsqfvvgp7ybfbv830bjky7cymxjvj8w"))))
(build-system r-build-system)
(propagated-inputs
`(("r-cli" ,r-cli)
@@ -1695,13 +1697,13 @@ and printing capabilities than traditional data frames.")
(define-public r-dplyr
(package
(name "r-dplyr")
- (version "1.0.2")
+ (version "1.0.3")
(source (origin
(method url-fetch)
(uri (cran-uri "dplyr" version))
(sha256
(base32
- "0jnw18nw20gw3jvq3kvkf9mqn6b7mvgmys8g6350k5jwpygk5cbw"))))
+ "0hc4wnx70mrsb3s0k5ywffhnky3hznlrvvs22m6ls5crgvcak898"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ellipsis" ,r-ellipsis)
@@ -1850,13 +1852,13 @@ times.")
(define-public r-data-table
(package
(name "r-data-table")
- (version "1.13.4")
+ (version "1.13.6")
(source (origin
(method url-fetch)
(uri (cran-uri "data.table" version))
(sha256
(base32
- "0jrvl5b8qbzmiymhjgbj4l2nai87ijvv33aw24xvzjx0rkys9dv1"))))
+ "16ryrpzl86krww5nx7a97i09y5xqld4lw4d9pa1vzjl99x6ds36m"))))
(build-system r-build-system)
(inputs
`(("zlib" ,zlib)))
@@ -2125,14 +2127,14 @@ limited to R.")
(define-public r-backports
(package
(name "r-backports")
- (version "1.2.0")
+ (version "1.2.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "backports" version))
(sha256
(base32
- "1xgp4i6yxkh2viia96hlf004hn47yrhfivwf8wv63xdldqa8yj9v"))))
+ "1mf2nz78l97lbxyagv55bcxrny51ds8g28h307cfa1g3ayylp0x2"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/backports")
(synopsis "Reimplementations of functions introduced since R 3.0.0")
@@ -2409,13 +2411,13 @@ functions make it easy to control additional request components.")
(define-public r-git2r
(package
(name "r-git2r")
- (version "0.27.1")
+ (version "0.28.0")
(source (origin
(method url-fetch)
(uri (cran-uri "git2r" version))
(sha256
(base32
- "1h1vfzym6hi1fqs9p5z5v0f4xldggr425frw8k6dsidah3qhg4h9"))))
+ "1wjmbs9cmm16pm3g0rmqp7cxxyh95m5lgx4fx5bpgj6j466i8vff"))))
(build-system r-build-system)
(inputs
`(("libgit2" ,libgit2)
@@ -2494,13 +2496,13 @@ tools to simplify the devolpment of R packages.")
(define-public r-withr
(package
(name "r-withr")
- (version "2.3.0")
+ (version "2.4.0")
(source (origin
(method url-fetch)
(uri (cran-uri "withr" version))
(sha256
(base32
- "1837vjp35npjrnis1im5xrwj1swpgnms00gkjiz7296l8yckrh1c"))))
+ "1y0l6zbpg0wix60r58yk452aqvx4rd0bk7zw9b90lzniwk3wvr7d"))))
(build-system r-build-system)
(native-inputs
`(("r-knitr" ,r-knitr)))
@@ -2515,18 +2517,20 @@ were originally a part of the r-devtools package.")
(define-public r-hms
(package
(name "r-hms")
- (version "0.5.3")
+ (version "1.0.0")
(source
(origin
(method url-fetch)
(uri (cran-uri "hms" version))
(sha256
(base32
- "1baki0qw5ijgiflvsdvqj3apg4yanf12vx14kwbqdzk5rz46fasf"))))
+ "0qn9lvpkqrpxck88nf0zbff43vd7d6s1ibg58qfr3w14sw1yj14p"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-rlang" ,r-rlang)
+ `(("r-ellipsis" ,r-ellipsis)
+ ("r-lifecycle" ,r-lifecycle)
("r-pkgconfig" ,r-pkgconfig)
+ ("r-rlang" ,r-rlang)
("r-vctrs" ,r-vctrs)))
(home-page "https://github.com/rstats-db/hms")
(synopsis "Pretty time of day")
@@ -2630,13 +2634,13 @@ well as additional utilities such as panel and axis annotation functions.")
(define-public r-rcpparmadillo
(package
(name "r-rcpparmadillo")
- (version "0.10.1.2.0")
+ (version "0.10.1.2.2")
(source (origin
(method url-fetch)
(uri (cran-uri "RcppArmadillo" version))
(sha256
(base32
- "0nzi6plhdijx3khavmywzw9wbch0hj8kygphw35wdlslm4cnqcj1"))))
+ "0sfhk4mh39ab1y7pmlnijg4w65yz7pfsyjlqy931zdpjzh1kfciq"))))
(properties `((upstream-name . "RcppArmadillo")))
(build-system r-build-system)
(propagated-inputs
@@ -2676,13 +2680,13 @@ vectors.")
(define-public r-catools
(package
(name "r-catools")
- (version "1.18.0")
+ (version "1.18.1")
(source (origin
(method url-fetch)
(uri (cran-uri "caTools" version))
(sha256
(base32
- "0y1kgyiy322yhb0phzwvf2zgjz9awp13lhzhk9v1ddg88656jhq3"))))
+ "1yf98x2gaf84y9m32xrg84g384zlfwsdw7wvywdljpgdpvzs9szz"))))
(properties `((upstream-name . "caTools")))
(build-system r-build-system)
(propagated-inputs
@@ -2722,13 +2726,13 @@ certain criterion, e.g., it contains a certain regular file.")
(define-public r-rmarkdown
(package
(name "r-rmarkdown")
- (version "2.5")
+ (version "2.6")
(source
(origin
(method url-fetch)
(uri (cran-uri "rmarkdown" version))
(sha256
- (base32 "0vmd1kykd4p1nwqbvra34sld5brac0wxb1zmav4wxj05shy67bd5"))))
+ (base32 "1c7nrpnv2v43msv7nia90rjh6s5x9m5wlb3mpiwy04fyfb29krz6"))))
(properties `((upstream-name . "rmarkdown")))
(build-system r-build-system)
(propagated-inputs
@@ -2837,13 +2841,13 @@ a column in data frame.")
(define-public r-rsqlite
(package
(name "r-rsqlite")
- (version "2.2.1")
+ (version "2.2.2")
(source (origin
(method url-fetch)
(uri (cran-uri "RSQLite" version))
(sha256
(base32
- "0lynli9144dzb9vhxssba20v7z5h2nirawpvvy8ykv4n3ir7qlsl"))))
+ "0wx8awxfd4q4mb5dk261rf7zd7y2lcm121fplay0vxl697yym719"))))
(properties `((upstream-name . "RSQLite")))
(build-system r-build-system)
(propagated-inputs
@@ -3034,14 +3038,14 @@ statements.")
(define-public r-segmented
(package
(name "r-segmented")
- (version "1.3-0")
+ (version "1.3-1")
(source
(origin
(method url-fetch)
(uri (cran-uri "segmented" version))
(sha256
(base32
- "1a9nnlf8j8j4ik34z19x187s8ki7pv1aayr344jrpn3h6m8fk3x5"))))
+ "0g8l1i31zfqamvwc5j537k3ld6dr5z81p84grdlqq41gywmyidmr"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/segmented")
(synopsis "Regression models with breakpoints estimation")
@@ -3194,13 +3198,13 @@ using the multicore functionality of the parallel package.")
(define-public r-dt
(package
(name "r-dt")
- (version "0.16")
+ (version "0.17")
(source (origin
(method url-fetch)
(uri (cran-uri "DT" version))
(sha256
(base32
- "0in4d34nxb4pk2jygj0a21cqf0k0m4dhm4rjv68bnkp5kmmz6kbk"))))
+ "0mpvyfmi2viyhdqx11hznd7dl0q6kxrdmppjsmm2pk0x8a904hz3"))))
(properties
`((upstream-name . "DT")))
(build-system r-build-system)
@@ -3273,13 +3277,13 @@ analysis of large sparse or dense matrices.")
(define-public r-glmnet
(package
(name "r-glmnet")
- (version "4.0-2")
+ (version "4.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "glmnet" version))
(sha256
- (base32 "0qdswxvdwjcnw0by15p9yfzw8laq4f2j0ivpma6q8c5zywldpxxc"))))
+ (base32 "1js01qnznm20h4pslaw1ragxhrzk0w4nw7r6ryg7i27l344za2lg"))))
(build-system r-build-system)
(native-inputs
`(("gfortran" ,gfortran)
@@ -3779,14 +3783,14 @@ and tidyr provides no margins or aggregation.")
(define-public r-hexbin
(package
(name "r-hexbin")
- (version "1.28.1")
+ (version "1.28.2")
(source
(origin
(method url-fetch)
(uri (cran-uri "hexbin" version))
(sha256
(base32
- "1ry6jm3lqz3mj0s5rzbs6mpkz2hxpnvbw8c1vwc4pj7b173r5l22"))))
+ "0bbhs5pwxh474w62sq6gqvih7habancxng9wd4f2rgn6lv9zhhb2"))))
(build-system r-build-system)
(propagated-inputs
`(("r-lattice" ,r-lattice)))
@@ -3827,13 +3831,13 @@ features present in other programming languages.")
(define-public r-plotly
(package
(name "r-plotly")
- (version "4.9.2.1")
+ (version "4.9.3")
(source (origin
(method url-fetch)
(uri (cran-uri "plotly" version))
(sha256
(base32
- "1f0x83a2s7200iqi6gpngijks06fcvcbm6701d5r5rxpb8rawppl"))))
+ "0801i2q7sw62x734d58h9p2fwpi1hirqj73gsg18pqkdv4b1lkfl"))))
(build-system r-build-system)
(propagated-inputs
`(("r-base64enc" ,r-base64enc)
@@ -3842,7 +3846,6 @@ features present in other programming languages.")
("r-data-table" ,r-data-table)
("r-dplyr" ,r-dplyr)
("r-ggplot2" ,r-ggplot2)
- ("r-hexbin" ,r-hexbin)
("r-htmltools" ,r-htmltools)
("r-htmlwidgets" ,r-htmlwidgets)
("r-httr" ,r-httr)
@@ -3856,6 +3859,7 @@ features present in other programming languages.")
("r-scales" ,r-scales)
("r-tibble" ,r-tibble)
("r-tidyr" ,r-tidyr)
+ ("r-vctrs" ,r-vctrs)
("r-viridislite" ,r-viridislite)))
(home-page "https://plot.ly/r")
(synopsis "Create interactive web graphics")
@@ -4137,14 +4141,14 @@ existing packages provide.")
(define-public r-sfsmisc
(package
(name "r-sfsmisc")
- (version "1.1-7")
+ (version "1.1-8")
(source
(origin
(method url-fetch)
(uri (cran-uri "sfsmisc" version))
(sha256
(base32
- "12g6m8sf17q3qmm133nm4fa296w5n5d9ly3fvb2nvc0w4llkif3l"))))
+ "198zpkz1gvw954ym8669svrk81yb49j6fyk5i6a7dw07z3snlmdn"))))
(build-system r-build-system)
(home-page "https://cran.r-project.org/web/packages/sfsmisc")
(synopsis "Utilities from \"Seminar fuer Statistik\" ETH Zurich")
@@ -4532,14 +4536,14 @@ Farebrother's algorithm or Liu et al.'s algorithm.")
(define-public r-cowplot
(package
(name "r-cowplot")
- (version "1.1.0")
+ (version "1.1.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "cowplot" version))
(sha256
(base32
- "04d5pg4xi9nhgcbam71b5mp3q1g804ng864v90add1kddfyl3f9h"))))
+ "0j7d5vhzdxn1blrsfafx5z8lhq122rp8230hp9czrpsnnhjydp67"))))
(build-system r-build-system)
(propagated-inputs
`(("r-ggplot2" ,r-ggplot2)
@@ -4789,14 +4793,14 @@ can be efficiently implemented directly in the R language.")
(define-public r-robustbase
(package
(name "r-robustbase")
- (version "0.93-6")
+ (version "0.93-7")
(source
(origin
(method url-fetch)
(uri (cran-uri "robustbase" version))
(sha256
(base32
- "1cr478xi4n9jwsdpbq182a7ig47rpb413q28dz6d1am08sk6657a"))))
+ "0mh9d114p3jdrjf8yn4dx5ff41niz5wn411y0ckjcpnazp8d44c9"))))
(build-system r-build-system)
(native-inputs
`(("gfortran" ,gfortran)))
@@ -4969,13 +4973,13 @@ groupings.")
(define-public r-vgam
(package
(name "r-vgam")
- (version "1.1-4")
+ (version "1.1-5")
(source
(origin
(method url-fetch)
(uri (cran-uri "VGAM" version))
(sha256
- (base32 "1iwrpyhz3khgw904zxz3pn7d61zvkd5m22gimzk57f8jjplxh1zm"))))
+ (base32 "1fx123h4x5awzshv0m4jqbbllrdjfpslb2i8gl9phm1y1wahn69h"))))
(properties `((upstream-name . "VGAM")))
(build-system r-build-system)
(native-inputs
@@ -5036,14 +5040,14 @@ based on an interface to Fortran implementations by M. J. D. Powell.")
(define-public r-rcppeigen
(package
(name "r-rcppeigen")
- (version "0.3.3.7.0")
+ (version "0.3.3.9.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "RcppEigen" version))
(sha256
(base32
- "1b78qcjim0n9klgkr82n794d6bj9r9f33g0kcsszsns2hir65sk2"))))
+ "0qp9gypar280lm84pc8w0fxw4jgwqygwi3qnl5sl52kpkcj8c14a"))))
(properties `((upstream-name . "RcppEigen")))
(build-system r-build-system)
(propagated-inputs
@@ -5106,13 +5110,13 @@ using modular prediction and response module classes.")
(define-public r-quantreg
(package
(name "r-quantreg")
- (version "5.75")
+ (version "5.82")
(source
(origin
(method url-fetch)
(uri (cran-uri "quantreg" version))
(sha256
- (base32 "05mb1qmwah5sdgg2z7m36lqkh479phvb1cx4sjnv1ykvmi9alxv5"))))
+ (base32 "01wcai04asr0wcfm001whihwbbx3b3r1m65ngknj82nh6hg4xhza"))))
(build-system r-build-system)
(native-inputs
`(("gfortran" ,gfortran)))
@@ -5196,20 +5200,25 @@ C++ library for numerical linear algebra and RcppEigen glue.")
(define-public r-pbkrtest
(package
(name "r-pbkrtest")
- (version "0.4-8.6")
+ (version "0.5-0.1")
(source
(origin
(method url-fetch)
(uri (cran-uri "pbkrtest" version))
(sha256
(base32
- "0s5xhhrhv5i9680lw6af9lj2x4jc3fygmzzk0jjpxnb8g4b3p1jz"))))
+ "0sgl8r74cknmp8lnq5jvc1w181274ylgk6w4pxf4mzkfii42argm"))))
(build-system r-build-system)
(propagated-inputs
- `(("r-lme4" ,r-lme4)
+ `(("r-broom" ,r-broom)
+ ("r-dplyr" ,r-dplyr)
+ ("r-lme4" ,r-lme4)
("r-magrittr" ,r-magrittr)
("r-mass" ,r-mass)
- ("r-matrix" ,r-matrix)))
+ ("r-matrix" ,r-matrix)
+ ("r-numderiv" ,r-numderiv)))
+ (native-inputs
+ `(("r-knitr" ,r-knitr)))
(home-page "http://people.math.aau.dk/~sorenh/software/pbkrtest/")
(synopsis "Methods for linear mixed model comparison")
(description
@@ -5526,14 +5535,14 @@ easy and fun.")
(define-public r-fdrtool
(package
(name "r-fdrtool")
- (version "1.2.15")
+ (version "1.2.16")
(source
(origin
(method url-fetch)
(uri (cran-uri "fdrtool" version))
(sha256
(base32
- "1h46frlk7d9f4qx0bg6p55nrm9wwwz2sv6d1nz7061wdfsm69yb5"))))
+ "1aap4k1l3a9m43374xq688mqnzkgqx8l021li262r3h1xr4adpp7"))))
(build-system r-build-system)
(home-page "http://strimmerlab.org/software/fdrtool/")
(synopsis "Estimation of false discovery rates and higher criticism")
diff --git a/gnu/packages/syndication.scm b/gnu/packages/syndication.scm
index efe231c92f..54fa221fa6 100644
--- a/gnu/packages/syndication.scm
+++ b/gnu/packages/syndication.scm
@@ -56,7 +56,7 @@
(define-public newsboat
(package
(name "newsboat")
- (version "2.22")
+ (version "2.22.1")
(source
(origin
(method url-fetch)
@@ -64,7 +64,7 @@
"/newsboat-" version ".tar.xz"))
(sha256
(base32
- "146p3j46hna1m8zlacb9q1ljnldwv6xrjbaplm94f2x0v4azi1jj"))))
+ "1476fmfw2hkrjwyr3f7k9316lzwnn2b1dbc51rybcxipqlfg8849"))))
(build-system cargo-build-system)
(native-inputs
`(("gettext" ,gettext-minimal)
@@ -191,6 +191,7 @@ file system, and many more features.")
(uri (git-reference
(url "https://github.com/lwindolf/liferea/")
(commit (string-append "v" version))))
+ (file-name (git-file-name name version))
(sha256
(base32 "1g9463bvswsm899j6dfhslcg6np70m5wq143mjicr24zy8d17bm7"))))
(build-system glib-or-gtk-build-system)
diff --git a/gnu/packages/terminals.scm b/gnu/packages/terminals.scm
index 74e1937bbc..e6a7d6b16d 100644
--- a/gnu/packages/terminals.scm
+++ b/gnu/packages/terminals.scm
@@ -21,7 +21,7 @@
;;; Copyright © 2020 Valentin Ignatev <valentignatev@gmail.com>
;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
;;; Copyright © 2020 Marius Bakke <marius@gnu.org>
-;;; Copyright © 2020 Nicolas Goaziou <mail@nicolasgoaziou.fr>
+;;; Copyright © 2020, 2021 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2020 Leo Famulari <leo@famulari.name>
;;;
;;; This file is part of GNU Guix.
@@ -1242,7 +1242,7 @@ made by suckless.")
("rust-unicode-width" ,rust-unicode-width-0.1)
("rust-parking-lot" ,rust-parking-lot-0.9)
("rust-urlocator" ,rust-urlocator-0.1)
- ("rust-xdg" ,rust-xdg-2.2)
+ ("rust-xdg" ,rust-xdg-2)
("rust-image" ,rust-image-0.22)
("rust-dirs" ,rust-dirs-2.0)
("rust-x11-dl" ,rust-x11-dl-2)
diff --git a/gnu/packages/tex.scm b/gnu/packages/tex.scm
index 3c5f08196e..bdf881f643 100644
--- a/gnu/packages/tex.scm
+++ b/gnu/packages/tex.scm
@@ -14,6 +14,7 @@
;;; Copyright © 2018, 2020 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com>
;;; Copyright © 2020 Paul Garlick <pgarlick@tourbillion-technology.com>
+;;; Copyright © 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -824,6 +825,33 @@ originals.")
(define-public texlive-fonts-cm-super
(deprecated-package "texlive-fonts-cm-super" texlive-cm-super))
+(define-public texlive-courier
+ (package
+ (inherit (simple-texlive-package
+ "texlive-courier"
+ (list "/dvips/courier/"
+ "/fonts/afm/adobe/courier/"
+ "/fonts/afm/urw/courier/"
+ "/fonts/map/dvips/courier/"
+ "/fonts/tfm/adobe/courier/"
+ "/fonts/tfm/urw35vf/courier/"
+ "/fonts/type1/adobe/courier/"
+ "/fonts/type1/urw/courier/"
+ "/fonts/vf/adobe/courier/"
+ "/fonts/vf/urw35vf/courier/"
+ "/tex/latex/courier/"
+ "/tex4ht/ht-fonts/alias/adobe/courier/"
+ "/tex4ht/ht-fonts/unicode/adobe/courier/")
+ (base32
+ "1hfgisdi7mjf5156ax6d6zsbiq42zkmp1x5lg17rgzf61k6d6z1y")
+ #:trivial? #t))
+ (home-page "https://ctan.org/pkg/urw-base35")
+ (synopsis "URW Base 35 font pack for LaTeX")
+ (description "This package provides a drop-in replacements for the Courier
+font from Adobe's basic set.")
+ ;; No license version specified.
+ (license license:gpl3+)))
+
(define-public texlive-lm
(package
(inherit (simple-texlive-package
@@ -1291,6 +1319,32 @@ described in the TeXbook, together with various supporting files (some also
discussed in the book).")
(license license:knuth)))
+(define-public texlive-helvetic
+ (package
+ (inherit (simple-texlive-package
+ "texlive-helvetic"
+ (list "/dvips/helvetic/"
+ "/fonts/afm/adobe/helvetic/"
+ "/fonts/afm/urw/helvetic/"
+ "/fonts/map/dvips/helvetic/"
+ "/fonts/tfm/adobe/helvetic/"
+ "/fonts/tfm/monotype/helvetic/"
+ "/fonts/tfm/urw35vf/helvetic/"
+ "/fonts/type1/urw/helvetic/"
+ "/fonts/vf/adobe/helvetic/"
+ "/fonts/vf/monotype/helvetic/"
+ "/fonts/vf/urw35vf/helvetic/"
+ "/tex/latex/helvetic/")
+ (base32
+ "0c3f1ly7y6404z0akbfbbfql13sz717v0n0g69qjpr69hi4n0nsl")
+ #:trivial? #t))
+ (home-page "https://ctan.org/pkg/urw-base35")
+ (synopsis "URW Base 35 font pack for LaTeX")
+ (description "This package provides a drop-in replacements for the Helvetica
+font from Adobe's basic set.")
+ ;; No license version specified.
+ (license license:gpl3+)))
+
(define-public texlive-hyphen-afrikaans
(package
(inherit (texlive-hyphen-package
@@ -3535,6 +3589,29 @@ distribution.")
(description "This is a very limited subset of the TeX Live distribution.
It includes little more than the required set of LaTeX packages.")))
+(define-public texlive-tipa
+ (package
+ (inherit (simple-texlive-package
+ "texlive-tipa"
+ (list "/tex4ht/ht-fonts/alias/tipa/"
+ "/doc/fonts/tipa/"
+ "/fonts/map/dvips/tipa/"
+ "/fonts/source/public/tipa/"
+ "/fonts/tfm/public/tipa/"
+ "/fonts/type1/public/tipa/"
+ "/tex/latex/tipa/")
+ (base32
+ "1h53dscv8z6fsa0ax5dys3x11b2f1g60l22hpdf7c88cvdhcs8sn")
+ #:trivial? #t))
+ (home-page "https://www.ctan.org/pkg/tipa")
+ (synopsis "Fonts and macros for IPA phonetics characters")
+ (description "These fonts are considered the \"ultimate answer\" to IPA
+typesetting. The encoding of these 8-bit fonts has been registered as LaTeX
+standard encoding T3, and the set of addendum symbols as encoding
+TS3. \"Times-like\" Adobe Type 1 versions are provided for both the T3 and the
+TS3 fonts.")
+ (license license:lppl)))
+
(define-public texlive-latex-amsrefs
(package
(name "texlive-latex-amsrefs")
@@ -5353,6 +5430,56 @@ alternative version of the Kurier fonts. The difference lies in the absence
of ink traps which typify the Kurier font.")
(license license:gfl1.0)))
+(define-public texlive-jknappen
+ (package
+ (inherit (simple-texlive-package
+ "texlive-jknappen"
+ (list "/fonts/source/jknappen/"
+ "/fonts/tfm/jknappen/"
+ "/fonts/source/jknappen/"
+ "/fonts/tfm/jknappen/"
+ "/tex4ht/ht-fonts/alias/jknappen/"
+ "/tex4ht/ht-fonts/unicode/jknappen/")
+ (base32
+ "1v5wk5il41bddzr81h5636h3cjz0w1qann5g9garsb7qfch9fhws")
+ #:trivial? #t))
+ (home-page "https://www.ctan.org/pkg/jknappen")
+ (synopsis "Miscellaneous packages by Jörg Knappen")
+ (description
+ "This package contains a collection of macros by Jörg Knappen:
+@table @code
+@item greekctr
+New counterstyles @code{\\greek} and @code{\\Greek}.
+@item holtpolt
+Non-commutative fractions
+@item latin1jk
+@itemx latin2jk
+@itemx latin3jk
+Inputenc definition files that allow verbatim input in the respective ISO
+Latin codes.
+@item mathbol
+Blackboard bold fonts for use in maths.
+@item mathrsfs
+Mathematical script letters, as traditionally used in physics for Lagrangian,
+Hamiltonian, path integral measures, etc.
+@item parboxx
+New alignment options for parboxen at top and bottom of the box.
+@item sans
+Interchanges the roles of sans serif and roman fonts throughout the document.
+@item semtrans
+Support for special latin letters and diacritics used in transliteration of
+semitic languages
+@item smartmn
+Intelligent hyphen/minus, which guesses whether to render as hyphen or minus.
+@item sgmlcmpt
+Commands replacing the characters <, >, and &.
+@item tccompat
+A compatibility package for users of the older versions of the textcomp package.
+@item young
+Simple Young tableaux.
+@end table")
+ (license license:gpl2))) ;per the 00readme_txt file.
+
(define-public texlive-libertine
(package
(inherit (simple-texlive-package
@@ -5504,6 +5631,32 @@ CM-Super family of fonts. The package also offers its own LaTeX support for
OT2 encoded fonts, CM bright shaped fonts and Concrete shaped fonts.")
(license license:lppl)))
+(define-public texlive-marvosym
+ (package
+ (inherit (simple-texlive-package
+ "texlive-marvosym"
+ (list "/doc/fonts/marvosym/"
+ "/fonts/afm/public/marvosym/"
+ "/fonts/map/dvips/marvosym/"
+ "/fonts/tfm/public/marvosym/"
+ "/fonts/truetype/public/marvosym/"
+ "/fonts/type1/public/marvosym/"
+ "/tex/latex/marvosym/")
+ (base32
+ "0m3bbg06cia8ni86fjhvb7x4a5qcxgnpqcvicfms91w2px9ysc46")
+ #:trivial? #t))
+ (home-page "https://martinvogel.de/blog/index.php?\
+/archives/131-Marvosym.ttf.html")
+ (synopsis "Martin Vogel's Symbols (marvosym) font")
+ (description "The Martin Vogel’s Symbols fonts (marvosym) contains the
+Euro currency symbol as defined by the European commission, along with symbols
+for structural engineering, symbols for steel cross-sections, astronomy
+signs (sun, moon, planets), the 12 signs of the zodiac, scissor symbols, CE
+sign and others. This package contains both the original TrueType font and
+the derived Type 1 font, together with support files for TeX (LaTeX).")
+ (license (list license:lppl ;for TeX support files
+ license:silofl1.1)))) ;for fonts
+
(define-public texlive-metapost
(package
(name "texlive-metapost")
@@ -5592,6 +5745,24 @@ Association for Computing Machinery (ACM).")
get a narrower “natural” width.")
(license license:lppl)))
+(define-public texlive-wasy
+ (package
+ (inherit (simple-texlive-package
+ "texlive-wasy"
+ (list "/fonts/source/public/wasy/"
+ "/fonts/tfm/public/wasy/"
+ "/tex/plain/wasy/"
+ "/doc/fonts/wasy/")
+ (base32
+ "10dxbqgv42niybj65hj6y47x8lsl83m48rgw2v2s50k05wbghwbm")
+ #:trivial? #t))
+ (home-page "https://www.ctan.org/pkg/wasy")
+ (synopsis "Waldi symbol fonts")
+ (description "This package provides the @code{wasy} (Waldi symbol) fonts,
+in the Metafont and Adobe Type 1 formats. Support under LaTeX is provided by
+the @code{wasysym} package.")
+ (license license:public-domain)))
+
(define-public texlive-latex-wasysym
(package
(name "texlive-latex-wasysym")
@@ -5606,12 +5777,12 @@ get a narrower “natural” width.")
(build-system texlive-build-system)
(arguments '(#:tex-directory "latex/wasysym"))
(home-page "https://www.ctan.org/pkg/wasysym")
- (synopsis "LaTeX support file to use the WASY2 fonts")
+ (synopsis "LaTeX support file to use the @code{wasy} fonts")
(description
- "The wasy2WASY2 (Waldi Symbol) font by Roland Waldi provides many glyphs
-like male and female symbols and astronomical symbols, as well as the complete
-lasy font set and other odds and ends. The wasysym package implements an easy
-to use interface for these symbols.")
+ "The @code{wasy} (Waldi Symbol) font by Roland Waldi provides many glyphs like
+male and female symbols and astronomical symbols, as well as the complete
+@code{lasy} font set and other odds and ends. The @code{wasysym} package
+implements an easy to use interface for these symbols.")
(license license:lppl)))
(define-public texlive-latex-wrapfig
diff --git a/gnu/packages/text-editors.scm b/gnu/packages/text-editors.scm
index 81915ca52b..052dfa1236 100644
--- a/gnu/packages/text-editors.scm
+++ b/gnu/packages/text-editors.scm
@@ -5,7 +5,7 @@
;;; Copyright © 2017 Feng Shu <tumashu@163.com>
;;; Copyright © 2017 Nikita <nikita@n0.is>
;;; Copyright © 2014 Taylan Ulrich Bayırlı/Kammer <taylanbayirli@gmail.org>
-;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2019 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2019, 2020 Nicolas Goaziou <mail@nicolasgoaziou.fr>
@@ -230,7 +230,7 @@ bindings and many of the powerful features of GNU Emacs.")
(define-public jucipp
(package
(name "jucipp")
- (version "1.6.1")
+ (version "1.6.2")
(home-page "https://gitlab.com/cppit/jucipp")
(source (origin
(method git-fetch)
@@ -242,7 +242,7 @@ bindings and many of the powerful features of GNU Emacs.")
(recursive? #t)))
(file-name (git-file-name name version))
(sha256
- (base32 "0lb477acqrm3fy3j6i7j9l68j48cnkrzi80588npwwjssqicy4g6"))))
+ (base32 "10idv2kyw2dg45wfcnh7nybs8qys7kfvif90sjrff3541k97pm5y"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags '("-DBUILD_TESTING=ON"
diff --git a/gnu/packages/version-control.scm b/gnu/packages/version-control.scm
index 5eaaf2681e..f53ca9b11b 100644
--- a/gnu/packages/version-control.scm
+++ b/gnu/packages/version-control.scm
@@ -6,12 +6,12 @@
;;; Copyright © 2015, 2016 Mathieu Lirzin <mthl@gnu.org>
;;; Copyright © 2014, 2015, 2016 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2014, 2016, 2019 Eric Bavier <bavier@member.fsf.org>
-;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2015, 2016, 2017, 2018, 2019, 2020, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2015, 2018, 2020 Kyle Meyer <kyle@kyleam.com>
;;; Copyright © 2015, 2017, 2018, 2020 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016, 2017 Leo Famulari <leo@famulari.name>
;;; Copyright © 2016, 2017, 2018 Nikita <nikita@n0.is>
-;;; Copyright © 2017, 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2017–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2017 Vasile Dumitrascu <va511e@yahoo.com>
;;; Copyright © 2017 Clément Lassieur <clement@lassieur.org>
;;; Copyright © 2017, 2020 EuAndreh <eu@euandre.org>
@@ -1683,14 +1683,14 @@ history. It implements the changeset evolution concept for Mercurial.")
(define-public neon
(package
(name "neon")
- (version "0.30.2")
+ (version "0.31.2")
(source (origin
(method url-fetch)
- (uri (string-append "http://www.webdav.org/neon/neon-"
+ (uri (string-append "https://notroj.github.io/neon/neon-"
version ".tar.gz"))
(sha256
(base32
- "1jpvczcx658vimqm7c8my2q41fnmjaf1j03g7bsli6rjxk6xh2yv"))))
+ "0y46dbhiblcvg8k41bdydr3fivghwk73z040ki5825d24ynf67ng"))))
(build-system gnu-build-system)
(native-inputs
`(("perl" ,perl)
@@ -1704,11 +1704,12 @@ history. It implements the changeset evolution concept for Mercurial.")
;; https://sourceware.org/bugzilla/show_bug.cgi?id=16475
#:tests? #f
#:configure-flags '("--enable-shared"
+ "--disable-static"
;; requires libgnutils-config, deprecated
;; in gnutls 2.8.
; "--with-ssl=gnutls")))
"--with-ssl=openssl")))
- (home-page "http://www.webdav.org/neon/")
+ (home-page "https://notroj.github.io/neon/")
(synopsis "HTTP and WebDAV client library")
(description
"Neon is an HTTP and WebDAV client library, with a C interface and the
@@ -1937,7 +1938,7 @@ standards-compliant ChangeLog entries based on the changes that it detects.")
(define-public diffstat
(package
(name "diffstat")
- (version "1.63")
+ (version "1.64")
(source (origin
(method url-fetch)
(uri
@@ -1948,7 +1949,7 @@ standards-compliant ChangeLog entries based on the changes that it detects.")
"diffstat-" version ".tgz")))
(sha256
(base32
- "0vyw200s5dv1257pmrh6c6fdkmw3slyz5szpqfx916xr04sdbpby"))))
+ "1z7pwcv48fjnhxrjcsjdy83x8b9ckl582mbbds90a79fkn6y7bmq"))))
(build-system gnu-build-system)
(home-page "https://invisible-island.net/diffstat/")
(synopsis "Make histograms from the output of @command{diff}")
diff --git a/gnu/packages/video.scm b/gnu/packages/video.scm
index 824ea62273..cebb70d28e 100644
--- a/gnu/packages/video.scm
+++ b/gnu/packages/video.scm
@@ -41,7 +41,7 @@
;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com>
;;; Copyright © 2020 Guillaume Le Vaillant <glv@posteo.net>
;;; Copyright © 2020 Alex McGrath <amk@amk.ie>
-;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
+;;; Copyright © 2020, 2021 Michael Rohleder <mike@rohleder.de>
;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
;;; Copyright © 2020 Brett Gilio <brettg@gnu.org>
;;; Copyright © 2020 Alexandru-Sergiu Marton <brown121407@posteo.ro>
@@ -885,14 +885,14 @@ H.264 (MPEG-4 AVC) video streams.")
(define-public mkvtoolnix
(package
(name "mkvtoolnix")
- (version "51.0.0")
+ (version "52.0.0")
(source
(origin
(method url-fetch)
(uri (string-append "https://mkvtoolnix.download/sources/"
"mkvtoolnix-" version ".tar.xz"))
(sha256
- (base32 "0w2crz6wnfw18m9m4zrij1yplcq5drzhz8n58w9kp51wl48a0yn1"))
+ (base32 "15y7ahlifsclnkl70wn5w34dil8nwcwcjnw3k2ydqc6dz4vb0j5s"))
(modules '((guix build utils)))
(snippet '(begin
;; Delete bundled libraries.
@@ -914,6 +914,7 @@ H.264 (MPEG-4 AVC) video streams.")
("file" ,file)
("flac" ,flac)
("fmt" ,fmt)
+ ("libdvdread" ,libdvdread)
("libmatroska" ,libmatroska)
("libogg" ,libogg)
("libvorbis" ,libvorbis)
@@ -1765,7 +1766,7 @@ videoformats depend on the configuration flags of ffmpeg.")
(define-public vlc
(package
(name "vlc")
- (version "3.0.11.1")
+ (version "3.0.12")
(source (origin
(method url-fetch)
(uri (string-append
@@ -1775,7 +1776,7 @@ videoformats depend on the configuration flags of ffmpeg.")
(patches (search-patches "vlc-qt-5.15.patch"))
(sha256
(base32
- "1f46h0hv7fk35zg4iczlp7ib7h2jmh8m4r5klw3g2558ib9134qq"))))
+ "0ygqihw2c5vvzv8950dlf7rdwz1cpz1668jgyja604ljibrmix7g"))))
(build-system gnu-build-system)
(native-inputs
`(("flex" ,flex)
@@ -2193,14 +2194,14 @@ To load this plugin, specify the following option when starting mpv:
(define-public youtube-dl
(package
(name "youtube-dl")
- (version "2021.01.08")
+ (version "2021.01.16")
(source (origin
(method url-fetch)
(uri (string-append "https://youtube-dl.org/downloads/latest/"
"youtube-dl-" version ".tar.gz"))
(sha256
(base32
- "1k870v9xc7g16nvixa272sdjnmc7pl49ymmnn6rdz0mcj2548h3k"))
+ "1q8pvw5j45k8nvr3d9rvnhi6xaj1mdqlkrg7q7qq6zciq5r54fhi"))
(snippet
'(begin
;; Delete the pre-generated files, except for the man page
@@ -3074,7 +3075,7 @@ be used for realtime video capture via Linux-specific APIs.")
(define-public obs
(package
(name "obs")
- (version "26.1.1")
+ (version "26.1.2")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -3083,7 +3084,7 @@ be used for realtime video capture via Linux-specific APIs.")
(file-name (git-file-name name version))
(sha256
(base32
- "18b40ayww5isjqnjz63l05fi5xwzrcc64jvwxwq8nqsydn0b14ng"))))
+ "1k1asqiqw757v59ayx0w029ril947hs0lcp8n91knzjl891fr4nc"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags
@@ -4156,7 +4157,7 @@ It counts more than 100 plugins.")
(define-public motion
(package
(name "motion")
- (version "4.2.2")
+ (version "4.3.2")
(home-page "https://motion-project.github.io/")
(source (origin
(method git-fetch)
@@ -4165,7 +4166,7 @@ It counts more than 100 plugins.")
(commit (string-append "release-" version))))
(sha256
(base32
- "05c1gx75xy2hw49x6vkydvwxbr80kipsc3nr906k3hq8735svx6f"))
+ "09xs815jsivcilpmnrx2jkcxirj4lg5kp99fkr0p2sdxw03myi95"))
(file-name (git-file-name name version))))
(build-system gnu-build-system)
(native-inputs
@@ -4182,7 +4183,7 @@ It counts more than 100 plugins.")
'(#:phases (modify-phases %standard-phases
(replace 'bootstrap
(lambda _
- (patch-shebang "version.sh")
+ (patch-shebang "scripts/version.sh")
(invoke "autoreconf" "-vfi"))))
#:configure-flags '("--sysconfdir=/etc")
#:make-flags (list (string-append "sysconfdir="
diff --git a/gnu/packages/virtualization.scm b/gnu/packages/virtualization.scm
index 10eae8ea7d..2262aa6197 100644
--- a/gnu/packages/virtualization.scm
+++ b/gnu/packages/virtualization.scm
@@ -137,13 +137,28 @@
(method url-fetch)
(uri (string-append "https://download.qemu.org/qemu-"
version ".tar.xz"))
- (sha256
- (base32
- "1rd41wwlvp0vpialjp2czs6i3lsc338xc72l3zkbb7ixjfslw5y9"))
- (patches (search-patches "qemu-build-info-manual.patch"))))
- (outputs '("out" "doc")) ;4.7 MiB of HTML docs
- (build-system gnu-build-system)
- (arguments
+ (sha256
+ (base32
+ "1rd41wwlvp0vpialjp2czs6i3lsc338xc72l3zkbb7ixjfslw5y9"))
+ (patches (search-patches "qemu-build-info-manual.patch"))
+ (modules '((guix build utils)))
+ (snippet
+ '(begin
+ ;; Fix a bug in the do_ioctl_ifconf() function of qemu to
+ ;; make ioctl(…, SIOCGIFCONF, …) work for emulated 64 bit
+ ;; architectures. The size of struct ifreq is handled
+ ;; incorrectly.
+ ;; https://lists.nongnu.org/archive/html/qemu-devel/2021-01/msg01545.html
+ (substitute* '("linux-user/syscall.c")
+ (("^([[:blank:]]*)const argtype ifreq_arg_type.*$" line indent)
+ (string-append line indent
+ "const argtype ifreq_max_type[] = { MK_STRUCT(STRUCT_ifmap_ifreq) };\n"))
+ (("^([[:blank:]]*)target_ifreq_size[[:blank:]]=.*$" _ indent)
+ (string-append indent "target_ifreq_size = thunk_type_size(ifreq_max_type, 0);")))
+ #t))))
+ (outputs '("out" "doc")) ;4.7 MiB of HTML docs
+ (build-system gnu-build-system)
+ (arguments
`(;; FIXME: Disable tests on i686 to work around
;; <https://bugs.gnu.org/40527>.
#:tests? ,(or (%current-target-system)
@@ -952,7 +967,7 @@ all common programming languages. Vala bindings are also provided.")
(define-public lxc
(package
(name "lxc")
- (version "4.0.5")
+ (version "4.0.6")
(source (origin
(method url-fetch)
(uri (string-append
@@ -960,7 +975,7 @@ all common programming languages. Vala bindings are also provided.")
version ".tar.gz"))
(sha256
(base32
- "1976l9308rx1ria1gazasypk5rmmf5jiqdh54dfrws5bslbdcb5g"))))
+ "0qz4l7mlhq7hx53q606qgvkyzyr01glsw290v8ppzvxn1fydlrci"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)))
@@ -1604,7 +1619,7 @@ Open Container Initiative (OCI) image layout and its tagged images.")
(define-public skopeo
(package
(name "skopeo")
- (version "1.2.0")
+ (version "1.2.1")
(source (origin
(method git-fetch)
(uri (git-reference
@@ -1613,7 +1628,7 @@ Open Container Initiative (OCI) image layout and its tagged images.")
(file-name (git-file-name name version))
(sha256
(base32
- "1v7k3ki10i6082r7zswblyirx6zck674y6bw3plssw4p1l2611rd"))))
+ "1y9pmijazbgxzriymrm7zrifmkd1x1wad9b3zjcj7zwr6c999dhg"))))
(build-system go-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
diff --git a/gnu/packages/web.scm b/gnu/packages/web.scm
index 632a925c64..a42913250c 100644
--- a/gnu/packages/web.scm
+++ b/gnu/packages/web.scm
@@ -45,7 +45,7 @@
;;; Copyright © 2018, 2019, 2020 Björn Höfling <bjoern.hoefling@bjoernhoefling.de>
;;; Copyright © 2020, 2021 Paul Garlick <pgarlick@tourbillion-technology.com>
;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
-;;; Copyright © 2020 Ryan Prior <rprior@protonmail.com>
+;;; Copyright © 2020, 2021 Ryan Prior <rprior@protonmail.com>
;;; Copyright © 2020 Alexandru-Sergiu Marton <brown121407@posteo.ro>
;;;
;;; This file is part of GNU Guix.
@@ -1478,7 +1478,7 @@ used to validate and fix HTML data.")
(define-public esbuild
(package
(name "esbuild")
- (version "0.8.29")
+ (version "0.8.32")
(source
(origin
(method git-fetch)
@@ -1487,7 +1487,7 @@ used to validate and fix HTML data.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32 "142gc21aaqmx0d01vmqsg7zi85pjgi3higr4ba0m52qf3mvxd6as"))
+ (base32 "17aa269dq0gsm4nlhh1q2mj6k8mw6v8ig3nygwk3s07l2xl5gqvn"))
(modules '((guix build utils)))
(snippet
'(begin
@@ -3995,7 +3995,7 @@ is limited to http and https.")
(define-public perl-net-http
(package
(name "perl-net-http")
- (version "6.19")
+ (version "6.20")
(source (origin
(method url-fetch)
(uri (string-append
@@ -4003,7 +4003,7 @@ is limited to http and https.")
"Net-HTTP-" version ".tar.gz"))
(sha256
(base32
- "1i1gbcwdzx74whn5vn6xbr2cp7frldfz2rfrcjp2qljr770nxdsj"))))
+ "07lzfycza7qqxli18xgsnqwiwxapl0b64z33wfw62aai4hm7nllj"))))
(build-system perl-build-system)
(propagated-inputs
`(("perl-io-socket-ssl" ,perl-io-socket-ssl)
diff --git a/gnu/packages/wm.scm b/gnu/packages/wm.scm
index e1359c8539..084822f2c7 100644
--- a/gnu/packages/wm.scm
+++ b/gnu/packages/wm.scm
@@ -15,7 +15,7 @@
;;; Copyright © 2017 Mekeor Melire <mekeor.melire@gmail.com>
;;; Copyright © 2017, 2019, 2020 Marius Bakke <marius@gnu.org>
;;; Copyright © 2017, 2020 Oleg Pykhalov <go.wigust@gmail.com>
-;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Pierre-Antoine Rouby <contact@parouby.fr>
;;; Copyright © 2018, 2019 Meiyo Peng <meiyo@riseup.net>
;;; Copyright © 2019 Rutger Helling <rhelling@mykolab.com>
@@ -1301,14 +1301,14 @@ its size
(define-public polybar
(package
(name "polybar")
- (version "3.5.3")
+ (version "3.5.4")
(source
(origin
(method url-fetch)
(uri (string-append "https://github.com/polybar/polybar/releases/"
"download/" version "/polybar-" version ".tar.gz"))
(sha256
- (base32 "1016g4b981c4hl2pr0m09b4wy0ln1zf3mfp09wrxs73zgfdbngyj"))))
+ (base32 "0awwjp3l0y9yhmrl914710ipawp2xr43jxrvmnanahlznblg8fhk"))))
(build-system cmake-build-system)
(arguments
;; Test is disabled because it requires downloading googletest from the
diff --git a/gnu/packages/xdisorg.scm b/gnu/packages/xdisorg.scm
index 1c91068b25..79ba61b344 100644
--- a/gnu/packages/xdisorg.scm
+++ b/gnu/packages/xdisorg.scm
@@ -2265,7 +2265,7 @@ Xwrits hides itself until you should take another break.")
(define-public xsettingsd
(package
(name "xsettingsd")
- (version "1.0.0")
+ (version "1.0.2")
(source
(origin
(method git-fetch)
@@ -2274,8 +2274,7 @@ Xwrits hides itself until you should take another break.")
(commit (string-append "v" version))))
(file-name (git-file-name name version))
(sha256
- (base32
- "05m4jlw0mgwp24cvyklncpziq1prr2lg0cq9c055sh4n9d93d07v"))))
+ (base32 "14gnkz18dipsa2v24f4nm9syxaa7g21iqjm7y65jn849ka2jr1h8"))))
(build-system scons-build-system)
(inputs
`(("libx11" ,libx11)))
diff --git a/gnu/packages/xfce.scm b/gnu/packages/xfce.scm
index 2192f61dc7..c8dd66b2e0 100644
--- a/gnu/packages/xfce.scm
+++ b/gnu/packages/xfce.scm
@@ -7,13 +7,13 @@
;;; Copyright © 2017, 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2017 Petter <petter@mykolab.ch>
;;; Copyright © 2017 Nikita <nikita@n0.is>
-;;; Copyright © 2018, 2019, 2020 Tobias Geerinckx-Rice <me@tobias.gr>
+;;; Copyright © 2018–2021 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019 Pkill -9 <pkill9@runbox.com>
;;; Copyright © 2019 L p R n d n <guix@lprndn.info>
;;; Copyright © 2019 Ingo Ruhnke <grumbel@gmail.com>
;;; Copyright © 2020 Vincent Legoll <vincent.legoll@gmail.com>
;;; Copyright © 2020 Jonathan Brielmaier <jonathan.brielmaier@web.de>
-;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
+;;; Copyright © 2020, 2021 Michael Rohleder <mike@rohleder.de>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -54,6 +54,7 @@
#:use-module (gnu packages pkg-config)
#:use-module (gnu packages polkit)
#:use-module (gnu packages popt)
+ #:use-module (gnu packages python)
#:use-module (gnu packages python-xyz)
#:use-module (gnu packages pulseaudio)
#:use-module (gnu packages search)
@@ -100,7 +101,7 @@
(define-public libxfce4util
(package
(name "libxfce4util")
- (version "4.14.0")
+ (version "4.16.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -108,7 +109,7 @@
"/" name "-" version ".tar.bz2"))
(sha256
(base32
- "093338faqqsrlc8dkmzr7qv411ysxczg1wlg7s3gvhrfk6vpkb9j"))))
+ "10svnpc8ggasym1pfgh24bfr0ndqs6lc7v1wmpsizj0zbms8snb0"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@@ -126,7 +127,7 @@ Xfce Desktop Environment.")
(define-public xfconf
(package
(name "xfconf")
- (version "4.14.4")
+ (version "4.16.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -134,12 +135,17 @@ Xfce Desktop Environment.")
"xfconf-" version ".tar.bz2"))
(sha256
(base32
- "0wszp93z64112jq5wm4133s64in2ndvnzbgsbn8dh7p5xhp64dyc"))))
+ "09al5bkq89b8pb3xyxnw0cnz6crxj8678ymwq2k9nzf60y812ak5"))))
(build-system gnu-build-system)
(arguments
'(#:phases
;; Run check after install phase to test dbus activation.
(modify-phases %standard-phases
+ ;; tests-end seems to hang forever
+ (add-before 'configure 'patchout-tests-end
+ (lambda _
+ (substitute* "tests/Makefile.in"
+ (("tests-end") ""))))
(add-after 'install 'custom-check
(lambda _
(setenv "HOME" (getenv "TMPDIR")) ; xfconfd requires a writable HOME
@@ -147,8 +153,15 @@ Xfce Desktop Environment.")
(setenv "XDG_DATA_DIRS" ; for finding org.xfce.Xfconf.service
(string-append %output "/share"))
;; For the missing '/etc/machine-id'.
- (setenv "DBUS_FATAL_WARNINGS" "0");
+ (setenv "DBUS_FATAL_WARNINGS" "0")
(invoke "dbus-launch" "make" "check")))
+ (add-after 'custom-check 'install-shell-completions
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (etc (string-append out "/etc")))
+ (with-directory-excursion "completions"
+ (install-file "xfconf-query"
+ (string-append etc "/bash_completion.d"))))))
(delete 'check))))
(native-inputs
`(("pkg-config" ,pkg-config)
@@ -172,7 +185,7 @@ storage system.")
(define-public libxfce4ui
(package
(name "libxfce4ui")
- (version "4.14.1")
+ (version "4.16.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -180,7 +193,7 @@ storage system.")
name "-" version ".tar.bz2"))
(sha256
(base32
- "1npjhznmnckhnylsv3l7p1zvhckhmp9d7vifs8w12kdfmrg0fjf4"))))
+ "1anfj3n28abv9kbcpybs7q3k5g3c3d0r4xf4hyfqms2b9zlwj1lb"))))
(build-system gnu-build-system)
(arguments
`(#:configure-flags
@@ -191,14 +204,11 @@ storage system.")
("gobject-introspection" ,gobject-introspection)))
(propagated-inputs
`(("gtk+-3" ,gtk+) ; required by libxfce4ui-2.pc
- ;; libxfce4kbd-private-2.pc refers to all these.
+ ;; libxfce4kbd-private-3.pc refers to all these.
("libxfce4util" ,libxfce4util)
("xfconf" ,xfconf)))
(inputs `(("libsm" ,libsm)
("libice" ,libice)
- ;; FIXME: required by libxfce4ui-1.pc, so should be propagated,
- ;; but will lead to a conflict with gtk+.
- ("gtk+-2" ,gtk+-2)
("startup-notification" ,startup-notification)))
(home-page "https://www.xfce.org/")
(synopsis "Widgets library for Xfce")
@@ -268,7 +278,7 @@ it to your needs by using several command line options.")
(define-public elementary-xfce-icon-theme
(package
(name "elementary-xfce-icon-theme")
- (version "0.15.1")
+ (version "0.15.2")
(source (origin
(method git-fetch)
(uri
@@ -278,7 +288,7 @@ it to your needs by using several command line options.")
(file-name (git-file-name name version))
(sha256
(base32
- "1rl15kh9c7qxw4pvwmw44fb4v3vwh6zin4wpx55bnvm5j76y6p3f"))))
+ "1g6vndqvp11c2kl5vkpzb1wxvr2pfb3hvqxjjdgx6qzq9x8zmiqk"))))
(build-system gnu-build-system)
(arguments
'(#:tests? #f ; no check target
@@ -303,7 +313,7 @@ upstream occasionally.")
(define-public exo
(package
(name "exo")
- (version "0.12.11")
+ (version "4.16.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -311,21 +321,8 @@ upstream occasionally.")
"exo-" version ".tar.bz2"))
(sha256
(base32
- "1dp5s64g6572h9zvx9js7qc72s728qsd9y7hl7hg6rwaq0cjb2gc"))))
+ "1k5sfm9cmg8k5zzzv0wb2cciqwwklnpfzcpak7wa32lsxl7b0x8r"))))
(build-system gnu-build-system)
- (arguments
- `(#:phases
- (modify-phases %standard-phases
- ;; exo won't find URI::Escape otherwise
- (add-after 'install 'wrap-exo-compose-mail
- (lambda* (#:key outputs #:allow-other-keys)
- (let* ((out (assoc-ref outputs "out"))
- (perl5lib (getenv "PERL5LIB")))
- (wrap-program (string-append out "/lib/xfce4/exo/exo-compose-mail")
- `("PERL5LIB" ":" prefix
- (,(string-append perl5lib ":" out
- "/lib/perl5/site_perl")))))
- #t)))))
(native-inputs
`(("pkg-config" ,pkg-config)
("intltool" ,intltool)))
@@ -334,10 +331,7 @@ upstream occasionally.")
`(("gtk+-3" ,gtk+)
("libxfce4util" ,libxfce4util)))
(inputs
- `(;; FIXME Referred to in exo-1.pc but conflict with gtk+-3.
- ("gtk+-2" ,gtk+-2)
- ("libxfce4ui" ,libxfce4ui)
- ("perl-uri" ,perl-uri)))
+ `(("libxfce4ui" ,libxfce4ui)))
(home-page "https://www.xfce.org/")
(synopsis "Extension library for Xfce")
(description
@@ -350,7 +344,7 @@ development.")
(define-public garcon
(package
(name "garcon")
- (version "0.7.0")
+ (version "4.16.1")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -358,14 +352,13 @@ development.")
"garcon-" version ".tar.bz2"))
(sha256
(base32
- "08r4dfvdvl178cjajm7ww16lwb7jsfqh3yz614mn84c0a0dvdhw2"))))
+ "07fjsgdjqxbcm84ga3cl495782k381k6mwksyrks3zf1l8klk4c4"))))
(build-system gnu-build-system)
(native-inputs
- `(("pkg-config" ,pkg-config)
+ `(("glib:bin" ,glib "bin")
+ ("gobject-introspection" ,gobject-introspection)
("intltool" ,intltool)
- ("glib:bin" ,glib "bin")))
- (inputs
- `(("gtk+-2" ,gtk+-2))) ; required by garcon-gtk2-1.pc
+ ("pkg-config" ,pkg-config)))
(propagated-inputs
`(("gtk+-3" ,gtk+) ; required by garcon-gtk3-1.pc
("libxfce4ui" ,libxfce4ui))) ; required by garcon-gtk3-1.pc
@@ -381,7 +374,7 @@ merging features essential for loading menus modified with menu editors.")
(define-public tumbler
(package
(name "tumbler")
- (version "0.2.9")
+ (version "4.16.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -389,7 +382,7 @@ merging features essential for loading menus modified with menu editors.")
"tumbler-" version ".tar.bz2"))
(sha256
(base32
- "1dh7h0jcbf8brvv9vwq4amnk6zgldl2ipdq3clzsx9p50dpr0235"))))
+ "0rmga1l7da0pjrs6jlyq1nfn513r543v7cchshrif1341knpy2wv"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@@ -420,7 +413,7 @@ management D-Bus specification.")
(define-public xfce4-panel
(package
(name "xfce4-panel")
- (version "4.14.0")
+ (version "4.16.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -428,7 +421,7 @@ management D-Bus specification.")
name "-" version ".tar.bz2"))
(sha256
(base32
- "1x3flv86jh9vqah7mr5mmfx2991mc6icsqjygsc3j88lgsyz7y6m"))
+ "0gf57hgx6v44bc2hj570inkafbi291scc6wbhmr6sc3xngp9m5sy"))
(patches (search-patches "xfce4-panel-plugins.patch"))))
(build-system gnu-build-system)
(arguments
@@ -577,7 +570,7 @@ keys for controlling the audio volume.")
(define-public xfce4-whiskermenu-plugin
(package
(name "xfce4-whiskermenu-plugin")
- (version "2.5.1")
+ (version "2.5.2")
(source
(origin
(method url-fetch)
@@ -585,7 +578,7 @@ keys for controlling the audio volume.")
"xfce4-whiskermenu-plugin/" (version-major+minor version) "/"
"xfce4-whiskermenu-plugin-" version ".tar.bz2"))
(sha256
- (base32 "09b9i68pf5ghq6dj55s4h3fj07jd5zpn1fghjwnnwxmakj54y1xj"))))
+ (base32 "05f53ycbszvw23g76pbdszfnqfk4f8w4imwfgljj140wzl50gxx6"))))
(build-system cmake-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@@ -659,15 +652,16 @@ per window.")
(define-public xfce4-appfinder
(package
(name "xfce4-appfinder")
- (version "4.14.0")
+ (version "4.16.1")
(source (origin
(method url-fetch)
- (uri (string-append "http://archive.xfce.org/xfce/"
+ (uri (string-append "https://archive.xfce.org/src/xfce/"
+ name "/"
(version-major+minor version)
- "/src/" name "-" version ".tar.bz2"))
+ "/" name "-" version ".tar.bz2"))
(sha256
(base32
- "162dibl6ipp72x0s35yhk7kkzxd4qimagg5zdkkv5kjgjpa7bhby"))))
+ "1v77h5634n49idci2jiw0k7jjk0vzpsvgyx2fkp18l39jayykqxz"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@@ -686,7 +680,7 @@ your system in categories, so you can quickly find and launch them.")
(define-public xfce4-session
(package
(name "xfce4-session")
- (version "4.14.2")
+ (version "4.16.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -694,7 +688,7 @@ your system in categories, so you can quickly find and launch them.")
"xfce4-session-" version ".tar.bz2"))
(sha256
(base32
- "1bwpylcn7x9i301yz45wvkzah9bncv9b44nf4hh9ln4i1jka9qzv"))
+ "1dqpgnq1hy9z170aapjglyp6jpyq1iqn5331nph727a82br77wi2"))
(modules '((guix build utils)))
(snippet
'(begin
@@ -731,7 +725,7 @@ allows you to shut down the computer from Xfce.")
(define-public xfce4-settings
(package
(name "xfce4-settings")
- (version "4.14.0")
+ (version "4.16.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -739,7 +733,7 @@ allows you to shut down the computer from Xfce.")
name "-" version ".tar.bz2"))
(sha256
(base32
- "0g0ipkg2fyg8r1z95ynx0xjr78bp49c2dwh4mli05nmb4gb40c70"))
+ "1hnx88a8xmi38mdf5gxdvx7n8yax1vzah8hy8g37bijlqx7l18b7"))
(patches (search-patches "xfce4-settings-defaults.patch"))))
(build-system gnu-build-system)
(arguments
@@ -758,7 +752,8 @@ allows you to shut down the computer from Xfce.")
("libxklavier" ,libxklavier)
("libxrandr" ,libxrandr)
("libxfce4ui" ,libxfce4ui)
- ("upower" ,upower)
+ ("upower" ,upower) ;; TODO needs upower-glib
+ ("python" ,python) ;; for xfce4-compose-mail
("xf86-input-libinput" ,xf86-input-libinput)))
(home-page "https://www.xfce.org/")
(synopsis "Xfce settings manager")
@@ -770,7 +765,7 @@ like appearance, display, keyboard and mouse settings.")
(define-public thunar
(package
(name "thunar")
- (version "1.8.16")
+ (version "4.16.2")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -778,13 +773,14 @@ like appearance, display, keyboard and mouse settings.")
"thunar-" version ".tar.bz2"))
(sha256
(base32
- "0k1w2zwa8z6sc8vi3frva74npks79x79n7q9p7ibwk7irfqkh4r2"))))
+ "1pbspa31q4kgydjzmssahq3k0wcy10ma466dlsd2y69nqjc0pab7"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
("intltool" ,intltool)))
(inputs
`(("exo" ,exo)
+ ("gobject-introspection" ,gobject-introspection)
("libexif" ,libexif)
("libgudev" ,libgudev)
("libnotify" ,libnotify)
@@ -802,7 +798,7 @@ fast.")
(define-public thunar-volman
(package
(name "thunar-volman")
- (version "0.9.5")
+ (version "4.16.0")
(source
(origin
(method url-fetch)
@@ -810,7 +806,7 @@ fast.")
(version-major+minor version) "/"
"thunar-volman-" version ".tar.bz2"))
(sha256
- (base32 "0dqqkbhn43hhmhqyx1fnmawpvysdjzw6ln4ryf629wil6dlwd9vy"))))
+ (base32 "0zaliahfz9ci2md7g6w9mb7z5azi5n56gihbnwyzvds2n8cygh6j"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@@ -833,7 +829,7 @@ and import the new pictures from your camera.")
(define-public xfwm4
(package
(name "xfwm4")
- (version "4.14.3")
+ (version "4.16.1")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -841,7 +837,7 @@ and import the new pictures from your camera.")
"xfwm4-" version ".tar.bz2"))
(sha256
(base32
- "1gw3fbiwraylarl1bqbvfh7nxlss5w8w0im5ahfg3a9mkrdfr6w2"))))
+ "133ip28v6j3x4l413d81ixsisf32sa0xzd54n0nn8g6p9fh4rcmm"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@@ -863,7 +859,7 @@ on the screen.")
(define-public xfdesktop
(package
(name "xfdesktop")
- (version "4.14.3")
+ (version "4.16.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -871,7 +867,7 @@ on the screen.")
"xfdesktop-" version ".tar.bz2"))
(sha256
(base32
- "14sp5a4n21prwmh2l5mjq5fjaq7r2pbjxddfx4wzaix8867x1mq6"))
+ "1bjv2mpkv7zmpzssbvvzh0x4pn8cqm8dvhgsv5i1xwngzspsajwk"))
(modules '((guix build utils)))
(snippet
#~(begin
@@ -1007,7 +1003,7 @@ system resources, while still being visually appealing and user friendly.")
(define-public xfce4-power-manager
(package
(name "xfce4-power-manager")
- (version "1.7.1")
+ (version "4.16.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/xfce/"
@@ -1015,7 +1011,7 @@ system resources, while still being visually appealing and user friendly.")
"xfce4-power-manager-" version ".tar.bz2"))
(sha256
(base32
- "1ki088iyr266cfyq9bmmhhd27wrsrmbhsblyf4yqby03hlvqif3k"))))
+ "1wrvqiifaxsgcn1kh4vm2hwxi9lgm6mw4zrfld2zl0mm05y5i77b"))))
(build-system gnu-build-system)
(native-inputs
`(("pkg-config" ,pkg-config)
@@ -1285,7 +1281,7 @@ A plugin for the Xfce panel is also available.")
(define-public xfce4-screensaver
(package
(name "xfce4-screensaver")
- (version "0.1.11")
+ (version "4.16.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/apps/"
@@ -1295,7 +1291,7 @@ A plugin for the Xfce panel is also available.")
version ".tar.bz2"))
(sha256
(base32
- "0xxcvvcch8bqd35ksq8l88a46xnidp59iq4ssyygki0a2vd20h41"))))
+ "13962rkc7nn3yigv1km8w0z7g41kj2bxmrrwx2f6gnv27qz18kbd"))))
(build-system gnu-build-system)
(arguments
`(#:phases
@@ -1505,7 +1501,7 @@ precedence rules, and the following functions and common constants.")
(define-public xfce4-cpufreq-plugin
(package
(name "xfce4-cpufreq-plugin")
- (version "1.2.2")
+ (version "1.2.3")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/panel-plugins/"
@@ -1514,7 +1510,7 @@ precedence rules, and the following functions and common constants.")
"/xfce4-cpufreq-plugin-" version ".tar.bz2"))
(sha256
(base32
- "16748wxy8aa5cxga0dbfrq7kv40alg5yx967r2l6vjapv2w083sh"))))
+ "1g07rpbq61dbdz0zvvb0xz6ipympxadwknn5y5q3v85k0nr9qfbx"))))
(build-system gnu-build-system)
(native-inputs
`(("intltool" ,intltool)
@@ -1922,7 +1918,7 @@ freedesktop.org specification.")
(define-public xfce4-stopwatch-plugin
(package
(name "xfce4-stopwatch-plugin")
- (version "0.4.0")
+ (version "0.5.0")
(source (origin
(method url-fetch)
(uri (string-append "https://archive.xfce.org/src/panel-plugins/"
@@ -1931,7 +1927,7 @@ freedesktop.org specification.")
"/xfce4-stopwatch-plugin-" version ".tar.bz2"))
(sha256
(base32
- "0jfr0ykn97hfngh0hd2wrs9rxswzxaxjv93g6csdp8hnij649nm3"))))
+ "1q840298jzdqlhc9lw49q32xzdhnbzcgvv69qq5slkc704s5w6vw"))))
(build-system gnu-build-system)
(native-inputs
`(("intltool" ,intltool)
diff --git a/gnu/packages/xml.scm b/gnu/packages/xml.scm
index 3648aeed03..472dfedbb8 100644
--- a/gnu/packages/xml.scm
+++ b/gnu/packages/xml.scm
@@ -26,6 +26,8 @@
;;; Copyright © 2020 Edouard Klein <edk@beaver-labs.com>
;;; Copyright © 2020 Brett Gilio <brettg@gnu.org>
;;; Copyright © 2020 Pierre Langlois <pierre.langlois@gmx.com>
+;;; Copyright © 2021 Michael Rohleder <mike@rohleder.de>
+;;; Copyright © 2021 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -51,6 +53,7 @@
#:use-module (gnu packages curl)
#:use-module (gnu packages docbook)
#:use-module (gnu packages documentation)
+ #:use-module (gnu packages gettext)
#:use-module (gnu packages glib)
#:use-module (gnu packages gnome)
#:use-module (gnu packages gnupg)
@@ -139,14 +142,14 @@ things the parser might find in the XML document (like start tags).")
(define-public libebml
(package
(name "libebml")
- (version "1.4.0")
+ (version "1.4.1")
(source
(origin
(method url-fetch)
(uri (string-append "https://dl.matroska.org/downloads/libebml/"
"libebml-" version ".tar.xz"))
(sha256
- (base32 "1cy4hbk8qbxn4c6pwvlsvr1rp8vhfach9rwfg4c50qa94nlckaw0"))))
+ (base32 "0ckhf7wcfwik1c8ilwipdr9p7b58pvqvj8x54l6slqah81lwd53f"))))
(build-system cmake-build-system)
(arguments
`(#:configure-flags
@@ -358,6 +361,86 @@ It uses libxml2 to access the XML files.")
based on libxml for XML parsing, tree manipulation and XPath support.")
(license license:x11)))
+(define-public openjade
+ (package
+ (name "openjade")
+ (version "1.3.2")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "mirror://sourceforge/openjade/openjade/"
+ version "/" name "-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1l92sfvx1f0wmkbvzv1385y1gb3hh010xksi1iyviyclrjb7jb8x"))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:configure-flags
+ (list (string-append "--enable-spincludedir="
+ (assoc-ref %build-inputs "opensp")
+ "/include/OpenSP")
+ (string-append "--enable-splibdir="
+ (assoc-ref %build-inputs "opensp") "/lib")
+ ;; Workaround segfaults in OpenJade (see:
+ ;; https://bugs.launchpad.net/ubuntu/+source/openjade/+bug/1869734).
+ "CXXFLAGS=-O0")
+ #:parallel-build? #f ;build fails otherwise
+ ;; The test suite fails with diff errors between the actual and
+ ;; expected results, like: (char<? #\a #\A) returning #t rather than
+ ;; #f (see: https://sourceforge.net/p/openjade/bugs/150/).
+ #:tests? #f
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'replace-deprecated-getopt
+ ;; See: https://sourceforge.net/p/openjade/bugs/140/.
+ (lambda _
+ (substitute* "msggen.pl"
+ (("use POSIX;") "use POSIX;\nuse Getopt::Std;")
+ (("do 'getopts.pl';") "")
+ (("&Getopts") "getopts"))
+ #t))
+ (add-after 'replace-deprecated-getopt 'fix-locale-lookup
+ ;; See: https://sourceforge.net/p/openjade/bugs/149/.
+ (lambda _
+ (substitute* "testsuite/expr-lang.dsl"
+ (("\\(language \"EN\" \"US\"\\)")
+ "(language \"EN\" \"US.UTF-8\")"))
+ #t))
+ (add-after 'install 'install-doc
+ (lambda* (#:key outputs #:allow-other-keys)
+ ;; TODO: Generate the manpage from source, with
+ ;; openjade-bootstrap and jadetex. See the file docsrc/Makefile.
+ (let* ((out (assoc-ref outputs "out"))
+ (man1 (string-append out "/share/man/man1")))
+ (install-file "docsrc/openjade.1" man1)
+ #t)))
+ (add-after 'install-doc 'install-dtds
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (dtd (string-append out "/sgml/dtd")))
+ (mkdir-p dtd)
+ (copy-recursively "dsssl" dtd)
+ #t)))
+ (delete 'check)
+ (add-after 'install 'check
+ (lambda* (#:key tests? out #:allow-other-keys)
+ (if tests?
+ (with-directory-excursion "testsuite"
+ (invoke "make"))
+ (format #t "test suite not run~%"))
+ #t)))))
+ (inputs
+ `(("opensp" ,opensp)))
+ (native-inputs
+ `(("perl" ,perl)))
+ (home-page "http://openjade.sourceforge.net/")
+ (synopsis "ISO/IEC 10179:1996 standard DSSSL language implementation")
+ (description "OpenJade is an implementation of Document Style Semantics
+and Specification Language (DSSSL), a style language to format SGML or XML
+documents. It contains backends for various formats such as RTF, HTML, TeX,
+MIF, SGML2SGML, and FOT.")
+ (license (license:non-copyleft "file://COPYING"
+ "See COPYING in the distribution."))))
+
(define-public perl-graph-readwrite
(package
(name "perl-graph-readwrite")
@@ -2210,6 +2293,95 @@ server using HTTP, and gets back the response as XML. This library provides a
modular implementation of XML-RPC for C and C++.")
(license (list license:psfl license:expat))))
+(define-public opensp
+ (package
+ (name "opensp")
+ (version "1.5.2")
+ (source (origin
+ (method url-fetch)
+ (uri (string-append "mirror://sourceforge/openjade/opensp/"
+ version "/OpenSP-" version ".tar.gz"))
+ (sha256
+ (base32
+ "1khpasr6l0a8nfz6kcf3s81vgdab8fm2dj291n5r2s53k228kx2p"))))
+ (outputs '("out" "doc"))
+ (build-system gnu-build-system)
+ (native-inputs
+ `(("docbook-xml" ,docbook-xml-4.1.2)
+ ("docbook-xsl" ,docbook-xsl)
+ ("libxml2" ,libxml2) ;for XML_CATALOG_DIR
+ ("xmlto" ,xmlto)
+ ;; Dependencies to regenerate the 'configure' script.
+ ("autoconf" ,autoconf)
+ ("automake" ,automake)
+ ("gettext" ,gettext-minimal)
+ ("libtool" ,libtool)))
+ (arguments
+ `( ;; Note: we cannot use '--enable-full-doc-build' as this would require
+ ;; Openjade, which in turn requires this package.
+
+ ;; Skip the tests that are known to fail (see:
+ ;; https://sourceforge.net/p/openjade/mailman/message/6182316/)
+ #:make-flags '("TESTS_THAT_FAIL=")
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'unpack 'patch-docbook-paths
+ (lambda* (#:key inputs #:allow-other-keys)
+ (let ((xmldoc (string-append (assoc-ref inputs "docbook-xml")
+ "/xml/dtd/docbook"))
+ (xsldoc (string-append (assoc-ref inputs "docbook-xsl")
+ "/xml/xsl/docbook-xsl-"
+ ,(package-version docbook-xsl))))
+ (substitute* (find-files "docsrc" "\\.xml$")
+ (("/usr/share/sgml/docbook/xml-dtd-4.1.2") xmldoc)
+ (("http://.*/docbookx\\.dtd")
+ (string-append xmldoc "/docbookx.dtd")))
+ #t)))
+ (add-after 'patch-docbook-paths 'delete-configure
+ ;; The configure script in the release was made with an older
+ ;; Autoconf and lacks support for the `--docdir' option.
+ (lambda _
+ (delete-file "configure")
+ #t))
+ (add-after 'delete-configure 'honor-docdir
+ ;; docdir is not honored due to being hardcoded in the various
+ ;; Makefile.am (see: https://sourceforge.net/p/openjade/bugs/147/).
+ (lambda _
+ (substitute* '("Makefile.am" "doc/Makefile.am" "docsrc/Makefile.am")
+ (("^docdir = .*") "docdir = @docdir@\n"))
+ #t))
+ (add-after 'delete-configure 'fix-tests-makefile.am
+ ;; Remove the trailing $(SHELL) from the TESTS_ENVIRONMENT variable
+ ;; definition. Otherwise, when targets are built using
+ ;; "$(am__check_pre) $(LOG_DRIVER) [...]", there would be two
+ ;; $(SHELL) expansion which fails the build.
+ (lambda _
+ (substitute* "tests/Makefile.am"
+ (("^\tOSGMLNORM=`echo osgmlnorm\\|sed '\\$\\(transform\\)'`\\\\")
+ "\tOSGMLNORM=`echo osgmlnorm|sed '$(transform)'`")
+ (("^\t\\$\\(SHELL\\)\n") ""))
+ #t)))))
+ ;; $SGML_CATALOG_FILES lists 'catalog' or 'CATALOG' or '*.cat' files found
+ ;; under the 'sgml' sub-directory of any given package.
+ (native-search-paths (list (search-path-specification
+ (variable "SGML_CATALOG_FILES")
+ (separator ":")
+ (files '("sgml"))
+ (file-pattern "^catalog$|^CATALOG$|^.*\\.cat$")
+ (file-type 'regular))))
+ (home-page "http://openjade.sourceforge.net/")
+ (synopsis "Suite of SGML/XML processing tools")
+ (description "OpenSP is an object-oriented toolkit for SGML parsing and
+entity management. It is a fork of James Clark's SP suite. The tools it
+contains can be used to parse, validate, and normalize SGML and XML files.
+The central program included in this package is @code{onsgmls}, which replaces
+@code{sgmls}, @code{ospam}, @code{ospent}, @code{osgmlnorm}, and @code{osx}.")
+ (license
+ ;; expat license with added clause regarding advertising
+ (license:non-copyleft
+ "file://COPYING"
+ "See COPYING in the distribution."))))
+
(define-public python-elementpath
(package
(name "python-elementpath")
diff --git a/gnu/packages/xorg.scm b/gnu/packages/xorg.scm
index 91bd915f71..ed98d1acd3 100644
--- a/gnu/packages/xorg.scm
+++ b/gnu/packages/xorg.scm
@@ -23,7 +23,7 @@
;;; Copyright © 2019 Mathieu Othacehe <m.othacehe@gmail.com>
;;; Copyright © 2020 Leo Prikler <leo.prikler@student.tugraz.at>
;;; Copyright © 2020 Florian Pelz <pelzflorian@pelzflorian.de>
-;;; Copyright © 2020 Michael Rohleder <mike@rohleder.de>
+;;; Copyright © 2020, 2021 Michael Rohleder <mike@rohleder.de>
;;; Copyright © 2020 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2020 Jean-Baptiste Note <jean-baptiste.note@m4x.org>
;;;
@@ -6252,14 +6252,14 @@ basic eye-candy effects.")
(define-public xpra
(package
(name "xpra")
- (version "4.0.5")
+ (version "4.0.6")
(source
(origin
(method url-fetch)
(uri (string-append "https://www.xpra.org/src/xpra-"
version ".tar.xz"))
(sha256
- (base32 "11ml66z8vbc0fa567kkmp2j20l5l60aflnkrz5ay8arw3w92nmnz"))
+ (base32 "1s49y2s75a8a70vj0micnmpic5zv1n32yjxy8fkxsqa6j5njyrww"))
(patches (search-patches "xpra-4.0.1-systemd-run.patch"))))
(build-system python-build-system)
;; see also http://xpra.org/trac/wiki/Dependencies
@@ -6286,6 +6286,9 @@ basic eye-candy effects.")
("xf86-input-keyboard" ,xf86-input-keyboard)
("python-pillow" ,python-pillow)
;; Optional dependencies.
+ ("libx264" ,libx264)
+ ("x265" ,x265)
+ ("libvpx" ,libvpx)
("python-rencode" ,python-rencode) ; For speed.
("python-numpy" ,python-numpy)
("python-pyopengl" ,python-pyopengl) ; Drawing acceleration.
diff --git a/gnu/services/base.scm b/gnu/services/base.scm
index 945b546607..f6a490f712 100644
--- a/gnu/services/base.scm
+++ b/gnu/services/base.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015, 2016 Alex Kost <alezost@gmail.com>
;;; Copyright © 2015, 2016, 2020 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2015 Sou Bunnbu <iyzsong@gmail.com>
@@ -279,7 +279,9 @@ system objects.")))
(define root-file-system-service-type
(shepherd-service-type 'root-file-system
- (const %root-file-system-shepherd-service)))
+ (const %root-file-system-shepherd-service)
+ (description "Take care of syncing the root file
+system and of remounting it read-only when the system shuts down.")))
(define (root-file-system-service)
"Return a service whose sole purpose is to re-mount read-only the root file
@@ -570,7 +572,9 @@ down.")))
(requirement '(udev))
(provision '(trng))
(start #~(make-forkexec-constructor '#$rngd-command))
- (stop #~(make-kill-destructor))))))
+ (stop #~(make-kill-destructor))))
+ (description "Run the @command{rngd} random number generation daemon to
+supply entropy to the kernel's pool.")))
(define* (rngd-service #:key
(rng-tools rng-tools)
@@ -597,7 +601,8 @@ to add @var{device} to the kernel's entropy pool. The service will fail if
(provision '(host-name))
(start #~(lambda _
(sethostname #$name)))
- (one-shot? #t)))))
+ (one-shot? #t)))
+ (description "Initialize the machine's host name.")))
(define (host-name-service name)
"Return a service that sets the host name to @var{name}."
@@ -626,7 +631,8 @@ to add @var{device} to the kernel's entropy pool. The service will fail if
(display 1 port))))
#t))
(stop #~(const #f)))))
- #t)) ;default to UTF-8
+ #t ;default to UTF-8
+ (description "Ensure the Linux virtual terminals run in UTF-8 mode.")))
(define console-keymap-service-type
(shepherd-service-type
@@ -638,7 +644,10 @@ to add @var{device} to the kernel's entropy pool. The service will fail if
(start #~(lambda _
(zero? (system* #$(file-append kbd "/bin/loadkeys")
#$@files))))
- (respawn? #f)))))
+ (respawn? #f)))
+ (description "@emph{This service is deprecated in favor of the
+@code{keyboard-layout} field of @code{operating-system}.} Load the given list
+of console keymaps with @command{loadkeys}.")))
(define-deprecated (console-keymap-service #:rest files)
#f
@@ -1341,7 +1350,9 @@ Service Switch}, for an example."
(pid (spawn)))
(umask mask)
pid))))
- (stop #~(make-kill-destructor))))))
+ (stop #~(make-kill-destructor))))
+ (description "Run the syslog daemon, @command{syslogd}, which is
+responsible for logging system messages.")))
;; Snippet adapted from the GNU inetutils manual.
(define %default-syslog.conf
@@ -2207,7 +2218,8 @@ instance."
(when device
(restart-on-EINTR (swapoff device)))
#f)))
- (respawn? #f))))))
+ (respawn? #f))))
+ (description "Turn on the virtual memory swap area.")))
(define (swap-service device)
"Return a service that uses @var{device} as a swap device."
@@ -2321,7 +2333,9 @@ This service is not part of @var{%base-services}."
(requirement '(user-processes udev dbus-system))
(provision (list (symbol-append 'term- (string->symbol virtual-terminal))))
(start #~(make-forkexec-constructor #$kmscon-command))
- (stop #~(make-kill-destructor)))))))
+ (stop #~(make-kill-destructor)))))
+ (description "Start the @command{kmscon} virtual terminal emulator for the
+Linux @dfn{kernel mode setting} (KMS).")))
(define-record-type* <static-networking>
static-networking make-static-networking
diff --git a/gnu/services/cups.scm b/gnu/services/cups.scm
index e8957c6859..17ed04e58b 100644
--- a/gnu/services/cups.scm
+++ b/gnu/services/cups.scm
@@ -32,7 +32,7 @@
#:use-module (guix records)
#:use-module (guix gexp)
#:use-module (ice-9 match)
- #:use-module ((srfi srfi-1) #:select (append-map))
+ #:use-module ((srfi srfi-1) #:select (append-map find))
#:export (cups-service-type
cups-configuration
opaque-cups-configuration
@@ -50,7 +50,13 @@
;;; Code:
(define %cups-accounts
- (list (user-group (name "lp") (system? #t))
+ (list (or
+ ;; The "lp" group should already exist; try to reuse it.
+ (find (lambda (group)
+ (and (user-group? group)
+ (string=? (user-group-name group) "lp")))
+ %base-groups)
+ (user-group (name "lp") (system? #t)))
(user-group (name "lpadmin") (system? #t))
(user-account
(name "lp")
@@ -482,7 +488,7 @@ programs.")
(package cups)
"The CUPS package.")
(extensions
- (package-list (list cups-filters epson-inkjet-printer-escpr
+ (package-list (list brlaser cups-filters epson-inkjet-printer-escpr
foomatic-filters hplip-minimal splix))
"Drivers and other extensions to the CUPS package.")
(files-configuration
diff --git a/gnu/services/networking.scm b/gnu/services/networking.scm
index 9ec0f6a9ca..a4d4ac0646 100644
--- a/gnu/services/networking.scm
+++ b/gnu/services/networking.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016, 2018, 2020 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2016 John Darrington <jmd@gnu.org>
@@ -14,6 +14,7 @@
;;; Copyright © 2019 Sou Bunnbu <iyzsong@member.fsf.org>
;;; Copyright © 2019 Alex Griffin <a@ajgrf.com>
;;; Copyright © 2020 Brice Waegeneire <brice@waegenei.re>
+;;; Copyright © 2021 Oleg Pykhalov <go.wigust@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -42,6 +43,7 @@
#:use-module (gnu packages admin)
#:use-module (gnu packages base)
#:use-module (gnu packages bash)
+ #:use-module (gnu packages cluster)
#:use-module (gnu packages connman)
#:use-module (gnu packages freedesktop)
#:use-module (gnu packages linux)
@@ -192,7 +194,11 @@
yggdrasil-configuration-log-level
yggdrasil-configuration-log-to
yggdrasil-configuration-json-config
- yggdrasil-configuration-package))
+ yggdrasil-configuration-package
+
+ keepalived-configuration
+ keepalived-configuration?
+ keepalived-service-type))
;;; Commentary:
;;;
@@ -277,7 +283,9 @@ fe80::1%lo0 apps.facebook.com\n")
(and (zero? (cdr (waitpid pid)))
(read-pid-file #$pid-file)))))
(stop #~(make-kill-destructor))))
- isc-dhcp))
+ isc-dhcp
+ (description "Run @command{dhcp}, a Dynamic Host Configuration
+Protocol (DHCP) client, on all the non-loopback network interfaces.")))
(define-deprecated (dhcp-client-service #:key (dhcp isc-dhcp))
dhcp-client-service-type
@@ -552,9 +560,7 @@ make an initial adjustment of more than 1,000 seconds."
(constraint-from openntpd-constraint-from
(default '()))
(constraints-from openntpd-constraints-from
- (default '()))
- (allow-large-adjustment? openntpd-allow-large-adjustment?
- (default #f))) ; upstream default
+ (default '())))
(define (openntpd-configuration->string config)
@@ -586,8 +592,7 @@ make an initial adjustment of more than 1,000 seconds."
"\n"))) ;add a trailing newline
(define (openntpd-shepherd-service config)
- (let ((openntpd (openntpd-configuration-openntpd config))
- (allow-large-adjustment? (openntpd-allow-large-adjustment? config)))
+ (let ((openntpd (openntpd-configuration-openntpd config)))
(define ntpd.conf
(plain-file "ntpd.conf" (openntpd-configuration->string config)))
@@ -599,10 +604,7 @@ make an initial adjustment of more than 1,000 seconds."
(start #~(make-forkexec-constructor
(list (string-append #$openntpd "/sbin/ntpd")
"-f" #$ntpd.conf
- "-d" ;; don't daemonize
- #$@(if allow-large-adjustment?
- '("-s")
- '()))
+ "-d") ;; don't daemonize
;; When ntpd is daemonized it repeatedly tries to respawn
;; while running, leading shepherd to disable it. To
;; prevent spamming stderr, redirect output to logfile.
@@ -1865,4 +1867,43 @@ See yggdrasil -genconf for config options.")
(service-extension profile-service-type
(compose list yggdrasil-configuration-package))))))
+
+;;;
+;;; Keepalived
+;;;
+
+(define-record-type* <keepalived-configuration>
+ keepalived-configuration make-keepalived-configuration
+ keepalived-configuration?
+ (keepalived keepalived-configuration-keepalived ;<package>
+ (default keepalived))
+ (config-file keepalived-configuration-config-file ;file-like
+ (default #f)))
+
+(define keepalived-shepherd-service
+ (match-lambda
+ (($ <keepalived-configuration> keepalived config-file)
+ (list
+ (shepherd-service
+ (provision '(keepalived))
+ (documentation "Run keepalived.")
+ (requirement '(loopback))
+ (start #~(make-forkexec-constructor
+ (list (string-append #$keepalived "/sbin/keepalived")
+ "--dont-fork" "--log-console" "--log-detail"
+ "--pid=/var/run/keepalived.pid"
+ (string-append "--use-file=" #$config-file))
+ #:pid-file "/var/run/keepalived.pid"
+ #:log-file "/var/log/keepalived.log"))
+ (respawn? #f)
+ (stop #~(make-kill-destructor)))))))
+
+(define keepalived-service-type
+ (service-type (name 'keepalived)
+ (extensions (list (service-extension shepherd-root-service-type
+ keepalived-shepherd-service)))
+ (description
+ "Run @uref{https://www.keepalived.org/, Keepalived}
+routing software.")))
+
;;; networking.scm ends here
diff --git a/gnu/services/shepherd.scm b/gnu/services/shepherd.scm
index 1faeb350df..d2f9776288 100644
--- a/gnu/services/shepherd.scm
+++ b/gnu/services/shepherd.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2013, 2014, 2015, 2016, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2013, 2014, 2015, 2016, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2017 Clément Lassieur <clement@lassieur.org>
;;; Copyright © 2018 Carlo Zancanaro <carlo@zancanaro.id.au>
;;; Copyright © 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
@@ -119,23 +119,25 @@ ensuring they are started and stopped in the right order.")))
(service shepherd-root-service-type '()))
(define-syntax shepherd-service-type
- (syntax-rules ()
+ (syntax-rules (description)
"Return a <service-type> denoting a simple shepherd service--i.e., the type
for a service that extends SHEPHERD-ROOT-SERVICE-TYPE and nothing else. When
DEFAULT is given, use it as the service's default value."
- ((_ service-name proc default)
+ ((_ service-name proc default (description text))
(service-type
(name service-name)
(extensions
(list (service-extension shepherd-root-service-type
(compose list proc))))
- (default-value default)))
- ((_ service-name proc)
+ (default-value default)
+ (description text)))
+ ((_ service-name proc (description text))
(service-type
(name service-name)
(extensions
(list (service-extension shepherd-root-service-type
- (compose list proc))))))))
+ (compose list proc))))
+ (description text)))))
(define %default-imported-modules
;; Default set of modules imported for a service's consumption.
diff --git a/gnu/services/syncthing.scm b/gnu/services/syncthing.scm
new file mode 100644
index 0000000000..12ebe7c107
--- /dev/null
+++ b/gnu/services/syncthing.scm
@@ -0,0 +1,89 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2021 Oleg Pykhalov <go.wigust@gmail.com>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gnu services syncthing)
+ #:use-module (gnu packages syncthing)
+ #:use-module (gnu services)
+ #:use-module (gnu services shepherd)
+ #:use-module (guix gexp)
+ #:use-module (guix records)
+ #:use-module (ice-9 match)
+ #:use-module (srfi srfi-1)
+ #:export (syncthing-configuration
+ syncthing-configuration?
+ syncthing-service-type))
+
+;;; Commentary:
+;;;
+;;; This module provides a service definition for the syncthing service.
+;;;
+;;; Code:
+
+(define-record-type* <syncthing-configuration>
+ syncthing-configuration make-syncthing-configuration
+ syncthing-configuration?
+ (syncthing syncthing-configuration-syncthing ;<package>
+ (default syncthing))
+ (arguments syncthing-configuration-arguments ;list of strings
+ (default '()))
+ (logflags syncthing-configuration-logflags ;number
+ (default 0))
+ (user syncthing-configuration-user ;string
+ (default #f))
+ (group syncthing-configuration-group ;string
+ (default "users"))
+ (home syncthing-configuration-home ;string
+ (default #f)))
+
+(define syncthing-shepherd-service
+ (match-lambda
+ (($ <syncthing-configuration> syncthing arguments logflags user group home)
+ (list
+ (shepherd-service
+ (provision (list (string->symbol (string-append "syncthing-" user))))
+ (documentation "Run syncthing.")
+ (requirement '(loopback))
+ (start #~(make-forkexec-constructor
+ (append (list (string-append #$syncthing "/bin/syncthing")
+ "-no-browser"
+ "-no-restart"
+ (string-append "-logflags=" (number->string #$logflags)))
+ '#$arguments)
+ #:user #$user
+ #:group #$group
+ #:environment-variables
+ (append (list (string-append "HOME=" (or #$home (passwd:dir (getpw #$user))))
+ "SSL_CERT_DIR=/etc/ssl/certs"
+ "SSL_CERT_FILE=/etc/ssl/certs/ca-certificates.crt")
+ (remove (lambda (str)
+ (or (string-prefix? "HOME=" str)
+ (string-prefix? "SSL_CERT_DIR=" str)
+ (string-prefix? "SSL_CERT_FILE=" str)))
+ (environ)))))
+ (respawn? #f)
+ (stop #~(make-kill-destructor)))))))
+
+(define syncthing-service-type
+ (service-type (name 'syncthing)
+ (extensions (list (service-extension shepherd-root-service-type
+ syncthing-shepherd-service)))
+ (description
+ "Run @uref{https://github.com/syncthing/syncthing, Syncthing}
+decentralized continuous file system synchronization.")))
+
+;;; syncthing.scm ends here
diff --git a/gnu/services/virtualization.scm b/gnu/services/virtualization.scm
index f435630faf..a45da14a80 100644
--- a/gnu/services/virtualization.scm
+++ b/gnu/services/virtualization.scm
@@ -1,7 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2017 Ryan Moe <ryan.moe@gmail.com>
;;; Copyright © 2018, 2020 Ludovic Courtès <ludo@gnu.org>
-;;; Copyright © 2020 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
+;;; Copyright © 2020,2021 Jan (janneke) Nieuwenhuizen <janneke@gnu.org>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -717,7 +717,7 @@ potential infinite waits blocking libvirt."))
(platforms qemu-binfmt-configuration-platforms
(default '())) ;safest default
(guix-support? qemu-binfmt-configuration-guix-support?
- (default #f)))
+ (default #t)))
(define (qemu-platform->binfmt qemu platform)
"Return a gexp that evaluates to a binfmt string for PLATFORM, using the
@@ -917,7 +917,9 @@ is added to the OS specified in CONFIG."
(disk-size (hurd-vm-configuration-disk-size config))
(type (lookup-image-type-by-name 'hurd-qcow2))
(os->image (image-type-constructor type)))
- (system-image (os->image os))))
+ (system-image
+ (image (inherit (os->image os))
+ (size disk-size)))))
(define (hurd-vm-port config base)
"Return the forwarded vm port for this childhurd config."
diff --git a/gnu/services/web.scm b/gnu/services/web.scm
index 855f4e649b..ff7b262b6a 100644
--- a/gnu/services/web.scm
+++ b/gnu/services/web.scm
@@ -922,19 +922,20 @@ of index files."
(define php-fpm-accounts
(match-lambda
(($ <php-fpm-configuration> php socket user group socket-user socket-group _ _ _ _ _ _)
- (list
- (user-group (name "php-fpm") (system? #t))
- (user-group
- (name group)
- (system? #t))
- (user-account
- (name user)
- (group group)
- (supplementary-groups '("php-fpm"))
- (system? #t)
- (comment "php-fpm daemon user")
- (home-directory "/var/empty")
- (shell (file-append shadow "/sbin/nologin")))))))
+ `(,@(if (equal? group "php-fpm")
+ '()
+ (list (user-group (name "php-fpm") (system? #t))))
+ ,(user-group
+ (name group)
+ (system? #t))
+ ,(user-account
+ (name user)
+ (group group)
+ (supplementary-groups '("php-fpm"))
+ (system? #t)
+ (comment "php-fpm daemon user")
+ (home-directory "/var/empty")
+ (shell (file-append shadow "/sbin/nologin")))))))
(define (default-php-fpm-config socket user group socket-user socket-group
pid-file log-file pm display-errors timezone workers-log-file)
diff --git a/gnu/system.scm b/gnu/system.scm
index c284a18379..90ad368664 100644
--- a/gnu/system.scm
+++ b/gnu/system.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2013, 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2015, 2016 Alex Kost <alezost@gmail.com>
;;; Copyright © 2016 Chris Marusich <cmmarusich@gmail.com>
@@ -858,8 +858,8 @@ syntactically correct."
(copy-file #$file #$output)))))
(define* (operating-system-etc-service os)
- "Return a <service> that builds containing the static part of the /etc
-directory."
+ "Return a <service> that builds a directory containing the static part of
+the /etc directory."
(let* ((login.defs
(plain-file "login.defs"
(string-append
diff --git a/gnu/system/examples/bare-hurd.tmpl b/gnu/system/examples/bare-hurd.tmpl
index e4b795ff27..135ed23cb6 100644
--- a/gnu/system/examples/bare-hurd.tmpl
+++ b/gnu/system/examples/bare-hurd.tmpl
@@ -5,7 +5,7 @@
;; To build a disk image for a virtual machine, do
;;
-;; ./pre-inst-env guix system disk-image --target=i586-pc-gnu \
+;; ./pre-inst-env guix system image --target=i586-pc-gnu \
;; gnu/system/examples/bare-hurd.tmpl
;;
;; You may run it like so
diff --git a/gnu/system/image.scm b/gnu/system/image.scm
index 67930750d5..1012fa6158 100644
--- a/gnu/system/image.scm
+++ b/gnu/system/image.scm
@@ -70,7 +70,7 @@
arm64-disk-image
image-with-os
- raw-image-type
+ efi-raw-image-type
qcow2-image-type
iso-image-type
uncompressed-iso-image-type
@@ -128,21 +128,21 @@
(label "GUIX_IMAGE")
(flags '(boot)))))))
-(define arm32-disk-image
+(define* (arm32-disk-image #:optional (offset root-offset))
(image
(format 'disk-image)
(target "arm-linux-gnueabihf")
(partitions
(list (partition
(inherit root-partition)
- (offset root-offset))))
+ (offset offset))))
;; FIXME: Deleting and creating "/var/run" and "/tmp" on the overlayfs
;; fails.
(volatile-root? #f)))
-(define arm64-disk-image
+(define* (arm64-disk-image #:optional (offset root-offset))
(image
- (inherit arm32-disk-image)
+ (inherit (arm32-disk-image offset))
(target "aarch64-linux-gnu")))
@@ -157,9 +157,9 @@ set to the given OS."
(inherit base-image)
(operating-system os)))
-(define raw-image-type
+(define efi-raw-image-type
(image-type
- (name 'raw)
+ (name 'efi-raw)
(constructor (cut image-with-os efi-disk-image <>))))
(define qcow2-image-type
@@ -189,12 +189,12 @@ set to the given OS."
(define arm32-image-type
(image-type
(name 'arm32-raw)
- (constructor (cut image-with-os arm32-disk-image <>))))
+ (constructor (cut image-with-os (arm32-disk-image) <>))))
(define arm64-image-type
(image-type
(name 'arm64-raw)
- (constructor (cut image-with-os arm64-disk-image <>))))
+ (constructor (cut image-with-os (arm64-disk-image) <>))))
;;
diff --git a/gnu/system/images/novena.scm b/gnu/system/images/novena.scm
index c4d25e850e..dfaf2c60ee 100644
--- a/gnu/system/images/novena.scm
+++ b/gnu/system/images/novena.scm
@@ -52,7 +52,7 @@
(define novena-image-type
(image-type
(name 'novena-raw)
- (constructor (cut image-with-os arm32-disk-image <>))))
+ (constructor (cut image-with-os (arm32-disk-image) <>))))
(define novena-barebones-raw-image
(image
diff --git a/gnu/system/images/pine64.scm b/gnu/system/images/pine64.scm
index f0b0c3f50d..63b31399a5 100644
--- a/gnu/system/images/pine64.scm
+++ b/gnu/system/images/pine64.scm
@@ -57,7 +57,7 @@
(define pine64-image-type
(image-type
(name 'pine64-raw)
- (constructor (cut image-with-os arm64-disk-image <>))))
+ (constructor (cut image-with-os (arm64-disk-image) <>))))
(define pine64-barebones-raw-image
(image
diff --git a/gnu/system/images/pinebook-pro.scm b/gnu/system/images/pinebook-pro.scm
index b038e262cb..22997fd742 100644
--- a/gnu/system/images/pinebook-pro.scm
+++ b/gnu/system/images/pinebook-pro.scm
@@ -51,13 +51,15 @@
(extra-options '("-L")) ; no carrier detect
(baud-rate "115200")
(term "vt100")
- (tty "ttyS0")))
+ (tty "ttyS2")))
%base-services))))
(define pinebook-pro-image-type
(image-type
(name 'pinebook-pro-raw)
- (constructor (cut image-with-os arm64-disk-image <>))))
+ (constructor (cut image-with-os
+ (arm64-disk-image (* 9 (expt 2 20))) ;9MiB
+ <>))))
(define pinebook-pro-barebones-raw-image
(image
diff --git a/gnu/system/install.scm b/gnu/system/install.scm
index e753463473..7fa5c15324 100644
--- a/gnu/system/install.scm
+++ b/gnu/system/install.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2015 Mark H Weaver <mhw@netris.org>
;;; Copyright © 2016 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2017 Marius Bakke <mbakke@fastmail.com>
@@ -212,7 +212,9 @@ the given target.")
;; 'user-processes' doesn't depend on us. The 'user-file-systems'
;; service will unmount TARGET eventually.
(delete-file-recursively
- (string-append target #$%backing-directory))))))))
+ (string-append target #$%backing-directory))))))
+ (description "Make the store copy-on-write, with writes going to \
+the given target.")))
(define (cow-store-service)
"Return a service that makes the store copy-on-write, such that writes go to
diff --git a/gnu/system/linux-container.scm b/gnu/system/linux-container.scm
index 4a9cd0efe2..e6fd0f1315 100644
--- a/gnu/system/linux-container.scm
+++ b/gnu/system/linux-container.scm
@@ -1,6 +1,6 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015 David Thompson <davet@gnu.org>
-;;; Copyright © 2016, 2017, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2016, 2017, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2019 Arun Isaac <arunisaac@systemreboot.net>
;;; Copyright © 2020 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2020 Google LLC
@@ -76,7 +76,10 @@ from OS that are needed on the bare metal and not in a container."
doing anything.")
(provision '(loopback networking))
(start #~(const #t))))
- #f))
+ #f
+ (description "Provide loopback and networking without actually doing
+anything. This service is used by guest systems running in containers, where
+networking support is provided by the host.")))
(define %nscd-container-caches
;; Similar to %nscd-default-caches but with smaller cache sizes. This allows
diff --git a/gnu/system/mapped-devices.scm b/gnu/system/mapped-devices.scm
index 559c27bb28..518dbc4fe8 100644
--- a/gnu/system/mapped-devices.scm
+++ b/gnu/system/mapped-devices.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2014, 2015, 2016, 2017, 2018, 2019, 2020 Ludovic Courtès <ludo@gnu.org>
+;;; Copyright © 2014, 2015, 2016, 2017, 2018, 2019, 2020, 2021 Ludovic Courtès <ludo@gnu.org>
;;; Copyright © 2016 Andreas Enge <andreas@enge.fr>
;;; Copyright © 2017, 2018 Mark H Weaver <mhw@netris.org>
;;;
@@ -130,7 +130,8 @@ specifications to 'targets'."
(documentation "Map a device node using Linux's device mapper.")
(start #~(lambda () #$(open source targets)))
(stop #~(lambda _ (not #$(close source targets))))
- (respawn? #f))))))
+ (respawn? #f))))
+ (description "Map a device node using Linux's device mapper.")))
(define (device-mapping-service mapped-device)
"Return a service that sets up @var{mapped-device}."
diff --git a/gnu/system/shadow.scm b/gnu/system/shadow.scm
index a69339bc07..7c57222716 100644
--- a/gnu/system/shadow.scm
+++ b/gnu/system/shadow.scm
@@ -20,6 +20,7 @@
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (gnu system shadow)
+ #:use-module ((guix diagnostics) #:select (formatted-message))
#:use-module (guix records)
#:use-module (guix gexp)
#:use-module (guix store)
@@ -34,6 +35,7 @@
#:use-module ((gnu packages admin)
#:select (shadow))
#:use-module (gnu packages bash)
+ #:use-module (ice-9 match)
#:use-module (srfi srfi-1)
#:use-module (srfi srfi-26)
#:use-module (srfi srfi-34)
@@ -222,6 +224,44 @@ for a colorful Guile experience.\\n\\n\"))))\n"))
(rename-file ".nanorc" ".config/nano/nanorc"))
#t))))
+(define (find-duplicates list)
+ "Find duplicate entries in @var{list}.
+Two entries are considered duplicates, if they are @code{equal?} to each other.
+This implementation is made asymptotically faster than @code{delete-duplicates}
+through the internal use of hash tables."
+ (let loop ((list list)
+ ;; We actually modify table in-place, but still allocate it here
+ ;; so that we only need one level of indentation.
+ (table (make-hash-table)))
+ (match list
+ (()
+ (hash-fold (lambda (key value seed)
+ (if (> value 1)
+ (cons key seed)
+ seed))
+ '()
+ table))
+ ((first . rest)
+ (hash-set! table first
+ (1+ (hash-ref table first 0)))
+ (loop rest table)))))
+
+(define (assert-unique-account-names users)
+ (match (find-duplicates (map user-account-name users))
+ (() *unspecified*)
+ (duplicates
+ (warning
+ (G_ "the following accounts appear more than once:~{ ~a~}~%")
+ duplicates))))
+
+(define (assert-unique-group-names groups)
+ (match (find-duplicates (map user-group-name groups))
+ (() *unspecified*)
+ (duplicates
+ (warning
+ (G_ "the following groups appear more than once:~{ ~a~}~%")
+ duplicates))))
+
(define (assert-valid-users/groups users groups)
"Raise an error if USERS refer to groups not listed in GROUPS."
(let ((groups (list->set (map user-group-name groups))))
@@ -281,17 +321,19 @@ of user '~a' is undeclared")
<user-group> objects. Raise an error if a user account refers to a undefined
group."
(define accounts
- (filter user-account? accounts+groups))
+ (delete-duplicates (filter user-account? accounts+groups) eq?))
(define user-specs
(map user-account->gexp accounts))
(define groups
- (filter user-group? accounts+groups))
+ (delete-duplicates (filter user-group? accounts+groups) eq?))
(define group-specs
(map user-group->gexp groups))
+ (assert-unique-account-names accounts)
+ (assert-unique-group-names groups)
(assert-valid-users/groups accounts groups)
;; Add users and user groups.
diff --git a/gnu/tests/install.scm b/gnu/tests/install.scm
index bf94e97c2a..9dbe63f1e4 100644
--- a/gnu/tests/install.scm
+++ b/gnu/tests/install.scm
@@ -222,7 +222,7 @@ reboot\n")
#:imported-modules '((gnu services herd)
(gnu installer tests)
(guix combinators))))
- (installation-image-type 'raw)
+ (installation-image-type 'efi-raw)
(install-size 'guess)
(target-size (* 2200 MiB)))
"Run SCRIPT (a shell script following the system installation procedure) in
@@ -272,7 +272,7 @@ packages defined in installation-os."
"-no-reboot"
"-m" "1200"
#$@(cond
- ((eq? 'raw installation-image-type)
+ ((eq? 'efi-raw installation-image-type)
#~("-drive"
,(string-append "file=" #$image
",if=virtio,readonly")))