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* gnu/packages/cran.scm (r-paws-analytics): Update to 0.6.0.
Change-Id: I5113ccaf37f395775e3053f4b5f4fb4fdcb34636
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* gnu/packages/cran.scm (r-paws-application-integration): Update to 0.6.0.
Change-Id: Ia11603af5ca15f71f52e8527da104e932f22c5ad
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* gnu/packages/cran.scm (r-paws-end-user-computing): Update to 0.6.0.
Change-Id: Iee934acf9078935edc19cdd64055949663e5f6ec
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* gnu/packages/cran.scm (r-paws-developer-tools): Update to 0.6.0.
Change-Id: I76076854850e76162bb212a1298f3a9ef4b97bfc
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* gnu/packages/cran.scm (r-paws-customer-engagement): Update to 0.6.0.
Change-Id: Ib40afc8078d9771f602318d522be358e8b4d6bf9
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* gnu/packages/cran.scm (r-seurat): Update to 5.1.0.
Change-Id: I070c848853e26c3b8c031e92ef24f39b08962348
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* gnu/packages/cran.scm (r-imager): Update to 1.0.2.
Change-Id: I678a384037c4c265d2a2b06f2b3b8013abb6d017
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* gnu/packages/cran.scm (r-farver): Update to 2.1.2.
Change-Id: Ic73015b3cd86c9cbaceedf6a721db8d6fe825c6c
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* gnu/packages/cran.scm (r-options): Update to 0.2.0.
Change-Id: Ia011d3fb5295a58ea49396b090186beae2bab575
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* gnu/packages/cran.scm (r-polspline): Update to 1.1.25.
Change-Id: I0fb7c7912036cff5fd56d577cf29a464e34a2775
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* gnu/packages/cran.scm (r-qlcmatrix): Update to 0.9.8.
[native-inputs]: Add r-knitr and r-rmarkdown.
Change-Id: I08e55b72ffacf17b41c895801d6cbdad52658e6b
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* gnu/packages/cran.scm (r-effectsize): Update to 0.8.8.
Change-Id: I51270018adaf62fdbcb3e5ad73b99f618b346b9a
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* gnu/packages/cran.scm (r-insight): Update to 0.19.11.
Change-Id: I3cb8ef7e28309d542cb30d993264cc79811b8d59
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* gnu/packages/version-control.scm (cgit): Update to 1.2.3-3.dbadd85.
Change-Id: I41827d1d97f28be71af5532b554d6b7a5e1123cc
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/fcitx5.scm (fcitx5-configtool)
[inputs]: Remove label.
Change-Id: Ib45fbf71d5f2ffbac3285e388629b6cf0ca004fe
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/fcitx5.scm (fcitx5-configtool)
[arguments]: Remove it.
[inputs]: Add qtdeclarative, qtquickcontrols2, ki18n, kpackage, kdeclarative,
kiconthemes, kcoreaddons, plasma-framework, kwindowsystem, kirigami, libxkbcommon.
Change-Id: I43a43458232a5ad3c1d156c779359e356cbf98b8
Signed-off-by: Christopher Baines <mail@cbaines.net>
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dhclient provides a hook mechanism for users. In order to run these hooks,
dhclient-script uses run-parts to run all the executable files found in
requested directory. run-parts is part of debianutils packages.
* gnu/packages/admin.scm (isc-dhcp)[inputs]: Add "debianutils" to provide
access to run-parts.
Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: I2057881da57a6065d65d1de95e51ed1c8b19e15f
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sfsexp is a C/C++ library for the manipulation (read, parse, modify, and
create) of symbolic expressions. In an environment where sfsexp is available,
Notmuch will compile with support for a S-expression-based query format. This
commit is to add sfsexp as a Notmuch dependency and therefore to add S-exp
support.
* gnu/packages/mail.scm (notmuch)[native-inputs]: Add git-minimal/pinned.
[inputs]: Add sfsexp.
Change-Id: Ic3b4a30b2672ad690d66b283e9bdc8e2197f97a7
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/c.scm (sfsexp): New variable.
Change-Id: Iabfbe10b4ad6134ae886a3d26487f881107b559c
Signed-off-by: Christopher Baines <mail@cbaines.net>
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For some applications, it's important to establish a non-blocking connection
rather than just making the socket non-blocking after the connection is
established. This is because there is I/O on the socket that will block during
the handshake.
I've noticed this blocking during the handshake causing issues in the build
coordinator for example.
This commit adds a new with-store variant to avoid changing the behaviour of
with-store/open-connection to ensure that this change can't break anything
that depends on the blocking nature of the socket.
* guix/store.scm (open-unix-domain-socket, open-inet-socket): Take
#:non-blocking? and use SOCK_NONBLOCK when calling socket if appropriate.
(connect-to-daemon, open-connection, call-with-store): Take #:non-blocking?
and pass it on.
(with-store/non-blocking): New syntax rule.
* .dir-locals.el (scheme-mode): Add entry for with-store/non-blocking.
Change-Id: I8225762b78448bc1f7b698c8de5d736e13f577bf
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* gnu/packages/linux.scm (evdi): Update to 1.14.4.
(libevdi)[native-inputs]: Add pkg-config.
Change-Id: I5e25a2a4a10608af927b2315dbd56b568ef56a1a
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* gnu/packages/tree-sitter.scm (tree-sitter-erlang): New variable.
Change-Id: Ib1449549249816736bf30a1d419a23fd7a45570e
Change-Id: I99cdde6418e04d4898f0f6509d2e7d849e2a4f22
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
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* gnu/packages/tree-sitter.scm (tree-sitter-vhdl): New variable.
Change-Id: Ia26e33f9898573e70c9afdd4025e3770d042dbd6
Change-Id: I07b2b89f878957af1544344122cdfe8970efc9f7
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
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* gnu/packages/tree-sitter.scm (tree-sitter-verilog): New variable.
Change-Id: I2066aff3cf39cebda956125cdac71236502a7ac5
Change-Id: If4acb8c10cd3942f46dcb05b8009760a6452b67a
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
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* gnu/packages/terminals.scm (foot): Fix cross-compilation.
[arguments]<#:configure-flags>: When cross-compilation, Remove -Db_lto=true.
[native-inputs]: When cross-compilation, Add wayland, pkg-config-for-build.
[inputs]: Add wayland-protocols.
Change-Id: Ia56d2583254bd9ab463e5b39859eae8eb5092c9b
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* gnu/packages/textutils.scm (utf8proc): fix cross-compilation.
[arguments]<#:make-flags>: Use CC-FOR-TARGET.
<#:phases>: When cross-compilation, Get test data from native-inputs.
Change-Id: I42699e62f28585cc215a8843b5daad9c52af44c9
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* gnu/packages/gtk.scm (cairo)[arguments]: Add ‘fix-cross-compilation’ phase
when cross-compiling.
Change-Id: I3579bb1249c749ee5f164bb4dd47f585b181c2bc
Signed-off-by: Zheng Junjie <zhengjunjie@iscas.ac.cn>
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This is a followup to 7757fdd491862fa5c33f1f894503346b89898a01.
* gnu/packages/package-management.scm (guix): Update to 7ca9809.
Change-Id: Ic1e6d75223eb7e1371805f51b9f230ef846c536c
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* tests/syscalls.scm ("terminal-string-width Japanese"): Skip when the
encoding of (current-output-port) is not UTF-8.
Reported-by: Ashvith Shetty <ashvithshetty10@gmail.com>
Change-Id: Ic284dd088d6b148d6fcb457290a28fdb0838b83d
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* tests/guix-download.sh: Set ‘GIT_CONFIG_GLOBAL’ and
‘GIT_CONFIG_SYSTEM’.
Reported-by: Ashvith Shetty <ashvithshetty10@gmail.com>
Change-Id: Ibe14d23db2e8af58b85c78248997c6dde78e11e0
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* gnu/system/file-systems.scm (%pseudo-file-system-types): Add "virtiofs"
to the list of pseudo file system types.
Change-Id: Ib1d99127e65f6543c592faec1c54bd0c5eae3ad7
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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* .dir-locals.el (scheme-mode): Indent swap-space same as file-system.
Change-Id: Id9f2cbd3c81343b479ab1e4df29c65f8b5bd739f
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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The field is called changeset, not revision. And the string does not have to
be a number.
* doc/guix.texi (origin Reference): Fix documentation for hg-reference.
Change-Id: Ic622dfc7b44caf42d070cdab8e42808dd96e6d63
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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For some reason, they were missing from the documentation. This commit adds
them including an example of usage.
* doc/guix.texi (origin Reference): Add cvs-fetch and cvs-reference.
Change-Id: I6622a9f70e6d71ed31fbb3d2689df4a6946f8868
Signed-off-by: Ludovic Courtès <ludo@gnu.org>
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Fixes <https://issues.guix.gnu.org/70877>.
* nix/libutil/util.cc (copyFile): Loop over ‘copy_file_range’ instead of
throwing upon short write.
Reported-by: Ricardo Wurmus <rekado@elephly.net>
Change-Id: Id7b8a65ea59006c2d91bc23732309a68665b9ca0
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* gnu/packages/bioinformatics.scm (r-anndatar): New variable.
Change-Id: I6060c5c15a46c064aa03ec2431a72ea88f925706
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As this avoids the indirect dependency on nss, which has a testsuite that
takes a long time to run.
* gnu/packages/package-management.scm (guix)[native-inputs]: Use po4a-minimal.
* guix/self.scm (%packages, translate-texi-manuals): Use po4a-minimal.
Change-Id: Iac7555cc850c1618d3d54f1b290faa4f9cfb4f8a
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The main reason is to avoid the texlive-updmap.cfg input indirectly pulling in
nss, which has a very time consuming testsuite.
* gnu/packages/gettext.scm (po4a-minimal): New variable.
Change-Id: If8d46a18a02e57d5427852e8e122de01f970ded4
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As I'm seeing this test fail with results of 5 to 7 seconds.
* gnu/packages/nss.scm (nss/fixed)[arguments]: Tweak a test to have a higher
time threshold.
Change-Id: Icb0551cd986acf67b2ba17dc8772a67b9747d31a
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* gnu/packages/mate.scm (atril)[description]: Expand with the upstream
description.
Change-Id: Ibd142094a5fbb4028613a03da0bd6de75cc9f6fe
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* gnu/packages/mate.scm (atril)[native-inputs]: Remove package labels.
[inputs]: Same.
Change-Id: I9bdb69426d4b3285b09310642b881ac9bcee0d47
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* gnu/packages/containers.scm (slirp4netns): Update to 1.3.0.
Change-Id: I1f9c75a6e3dab996465879cf6734799a8b9e9d53
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/geo.scm (gnome-maps): Update to 46.10.
[arguments]: Add phase to setup time zones for a new test.
[native-inputs]: Add libportal and tzdata-for-tests.
Change-Id: Ife9b17eda68662d2adb289acfeacf1dc8f179a46
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/gnome.scm (libshumate): Update to 1.2.1.
[arguments]: Drop `-Dlibsoup3=true` configure flag as it got removed
upstream. It only supports libsoup3 now.
[native-inputs]: Add gperf.
[propagated-inputs]: Add json-glib and protobuf-c.
Change-Id: Ibe63b6f2060f6684f8f68f44c2221ba9d6ad5a45
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/text-editors.scm (mg): Update to 20230501.
Change-Id: Ie72901207562488f392d5877e1b41a41067893f4
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/file-systems.scm (zfs): Update to 2.2.3.
Signed-off-by: Christopher Baines <mail@cbaines.net>
Change-Id: If77ba25fe98603d79fd08623ce12a9fa916bae43
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As last update was in February and new changes for new models and memory leaks
fixes since then.
* gnu/packages/machine-learning.scm (llama-cpp): Update to 0.0.0-2.fed0108.
[arguments]<#:phases>: Add 'disable-unrunable-tests' phase. Change
replacement of 'install to be a post-install 'install-main' phase so libraries
and header files are normally installed.
Change-Id: Ia6532945f588747c4d58fdb7611d6a9c3c596705
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/sycl.scm (adaptivecpp): New variable.
(opensync): Redefine using DEPRECATED-PACKAGE.
Change-Id: I7ac3f49409d539962de34510ed9255021b795724
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* guix/channels.scm (authenticate-channel): Handle single case with
authenticating message.
Change-Id: I7759607f37405e6d3bd4b7f5958fd11d908db204
Reviewed-by: Dale Mellor <guix-devel-0brg6a@rdmp.org>
Signed-off-by: Christopher Baines <mail@cbaines.net>
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* gnu/packages/web.scm (guix-data-service): Update to 0.0.1-49.f4be647.
Change-Id: I874df868fed2d22dd1bb8c696a55d8396581b9a6
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