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2015-03-02gnu: Add ruby-hoe.David Thompson
* gnu/packages/ruby.scm (ruby-hoe): New variable.
2015-03-02build: ruby: Install executables in /bin.David Thompson
* guix/build/ruby-build-system.scm (install): Add '--bindir' flag to gem command.
2015-03-02build: ruby: Add gitify phase.David Thompson
* guix/build-system/ruby.scm (lower): Add git as implicit input. * guix/build/ruby-build-system.scm (gitify): New procedure. (%standard-phases): Add gitify phase.
2015-03-02gnu: Add mpdscribble.David Thompson
* gnu/packages/mpd.scm (mpdscribble): New variable.
2015-03-02gnu: tcsh: Use ISO-8859-1 when patching "tests/testsuite".Ludovic Courtès
* gnu/packages/tcsh.scm (tcsh)[arguments]: Set %DEFAULT-PORT-ENCODING before substituting "tests/testsuite". Fixes build failure at <http://hydra.gnu.org/build/266962/nixlog/1/raw>.
2015-03-02system: Create a single-file certificate bundle in /etc/ssl/certs.Ludovic Courtès
Suggested by Mark H Weaver <mhw@netris.org>. * gnu/system.scm (certificate-bundle): New procedure. (etc-directory): Use it. [profile]: Set 'SSL_CERT_DIR', 'SSL_CERT_FILE', and 'GIT_SSL_CAINFO'.
2015-03-02system: Add 'x509-certificates' field, and populate /etc/ssl/certs.Ludovic Courtès
* gnu/system.scm (<operating-system>)[x509-certificates]: New field. (etc-directory): Add #:x509-certificates parameter and honor it. (operating-system-etc-directory): Pass #:x509-certificates in 'etc-directory' call. * doc/guix.texi (operating-system Reference): Document 'x509-certificates'.
2015-03-02gnu: Remove 'guile-reader-for-guile_1.8'.Ludovic Courtès
This was a useful example back in July 2012, but not very useful beyond that. * gnu/packages/guile.scm (guile-reader): Turn into a plain package. [source]: Use mirror:// URI. [inputs]: Use GUILE-2.0. [arguments]: Use the site/2.0 directory for --with-moduledir. (guile-reader/guile-1.8, guile-reader/guile-2.0): Remove.
2015-03-02services: xorg: Fix file descriptor leak from SLiM/xinitrc.Ludovic Courtès
This reverts commit 9515b745547cff08ad5b958bc54323dab19f29b9. * gnu/services/xorg.scm (xinitrc)[builder](close-all-fdes): Start from file descriptor 3.
2015-03-02gnu: Add llvm-3.6.0 and clang-3.6.0.Mark H Weaver
* gnu/packages/llvm.scm (llvm): Update to 3.6.0. (clang-from-llvm): New procedure. (clang): Update to 3.6.0. Reimplement using 'clang-from-llvm'. (llvm-3.5, clang-3.5): New variables.
2015-03-02gnu: Add crossmap.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (crossmap): New variable. * gnu/packages/patches/crossmap-allow-system-pysam.patch: New file. * gnu-system.am (dist_patch_DATA): Add it.
2015-03-02gexp: Make sure 'gexp-outputs' removes duplicate outputs.Ludovic Courtès
Fixes a regression introduced in f9efe56. * guix/gexp.scm (gexp-outputs): Add call to 'delete-duplicates'. * tests/gexp.scm ("output list, combined gexps, duplicate output"): New test.
2015-03-02gnu: gtk-xfce-engine: Update to 2.10.0.宋文武
* gnu/packages/xfce.scm (gtk-xfce-engine): Update to 2.10.0.
2015-03-02gnu: Add CLIPper.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (clipper): New variable.
2015-03-02gnu: Add Scikit-learn.Ricardo Wurmus
* gnu/packages/python.scm (python-scikit-learn, python2-scikit-learn): New variables.
2015-03-02gnu: xfconf: Re-enable tests.宋文武
* gnu/packages/xfce.scm (xfconf)[arguments]: Add #:phases.
2015-03-02gnu: Add MACS.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (macs): New variable.
2015-03-02gnu: Add pybedtools.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (python2-pybedtools): New variable.
2015-03-02gnu: Add pyyaml.Ricardo Wurmus
* gnu/packages/python.scm (python-pyyaml, python2-pyyaml): New variables.
2015-03-02gnu: libotr: Update to 4.1.0.Mark H Weaver
* gnu/packages/messaging.scm (libotr): Update to 4.1.0.
2015-03-01Revert "services: xorg: Fix file descriptor leak from SLiM/xinitrc."Mark H Weaver
This reverts commit ec4a4c46efaf2e7373f331654640f1321c0f2e62, because it broke XFCE.
2015-03-01gnu: xfconf: Update to 4.12.0.Mark H Weaver
* gnu/packages/xfce.scm (xfconf): Update to 4.12.0. Disable tests.
2015-03-01gnu: gnu-pw-mgr: Update to 1.3.Mark H Weaver
* gnu/packages/gnu-pw-mgr.scm (gnu-pw-mgr): Update to 1.3.
2015-03-01gnu: sharutils: Update to 4.15.Mark H Weaver
* gnu/packages/compression.scm (sharutils): Update to 4.15.
2015-03-01gnu: gdb: Update to 7.9.Mark H Weaver
* gnu/packages/gdb.scm (gdb): Update to 7.9.
2015-03-01Merge branch 'master' into core-updatesMark H Weaver
Conflicts: gnu/packages/gnupg.scm
2015-03-01gnu: gnupg: Update to 2.0.27.Mark H Weaver
* gnu/packages/gnupg.scm (gnupg): Update to 2.0.27.
2015-03-01gnu: libgcrypt: Update to 1.6.3.Mark H Weaver
* gnu/packages/gnupg.scm (libgcrypt): Update to 1.6.3.
2015-03-01gnu: wget: Update to 1.16.2.Ludovic Courtès
* gnu/packages/wget.scm (wget): Update to 1.16.2. [inputs]: Add PKG-CONFIG.
2015-03-01gnu: libpsl: Fix link flag in 'libpsl.pc'.Ludovic Courtès
* gnu/packages/web.scm (libpsl)[source]: Add 'snippet' and 'modules' fields.
2015-03-01gnu: gnupg-1: Update to 1.4.19.Ludovic Courtès
* gnu/packages/gnupg.scm (gnupg-1): Update to 1.4.19.
2015-03-01gnu: ecl: Update to version 15.2.21.Taylan Ulrich Bayırlı/Kammer
* gnu/packages/lisp.scm (ecl): Update to version 15.2.21, and disable the test suite because ECL now fails to initialize during 'make check'.
2015-03-01gnu: Add xbindkeys.Mathieu Lirzin
* gnu/packages/xdisorg.scm (xbindkeys): New variable.
2015-03-01gnu: Add AlsaModularSynth.Ricardo Wurmus
* gnu/packages/audio.scm (alsa-modular-synth): New variable.
2015-03-01gnu: Add clalsadrv.Ricardo Wurmus
* gnu/packages/audio.scm (clalsadrv): New variable.
2015-03-01Revert "build-system/gnu: Keep the sloppy conversion strategy during bootstrap."Ludovic Courtès
This reverts commit b479c3ddaf85c831e34888229849bc1ce34419de. This commit was the result of an incorrect characterization of the problem; see the log of commit 87c8b92 for details.
2015-03-01gnu: commencement: Make UTF-8 locales available right after 'guile-final'.Ludovic Courtès
In <http://hydra.gnu.org/build/263170>, we see: 153: 12 [patch-usr-bin-file #:native-inputs #f ...] [...] ?: 1 [regexp-exec # ...] In ice-9/boot-9.scm: 106: 0 [#<procedure 1998ec0 at ice-9/boot-9.scm:97:6 (thrown-k . args)> encoding-error ...] ice-9/boot-9.scm:106:20: In procedure #<procedure 1998ec0 at ice-9/boot-9.scm:97:6 (thrown-k . args)>: ice-9/boot-9.scm:106:20: Throw to key `encoding-error' with args `("scm_to_stringn" "cannot convert narrow string to output locale" 84 #f #f)'. This is due to that fact that 'patch-/usr/bin/file' read a line containing a byte sequence with bytes > 127 (namely a copyright sign.) But this build was running with a C locale, and so those bytes cannot be represented in that locale, hence this error. This commit makes the UTF-8 locales available earlier such that everything can be represented in locale encoding. * gnu/packages/commencement.scm (glibc-utf8-locales-final): Move earlier; change "gzip" input to GZIP built with %BOOT4-INPUTS. (%boot5-inputs): Define to %BOOT4-INPUTS plus GLIBC-UTF8-LOCALES-FINAL. (gnu-make-final, coreutils-final, grep-final): Use it instead of %BOOT4-INPUTS. (gzip-final): Remove. (%boot6-inputs): New variable. (%final-inputs): Use it instead of %BOOT5-INPUTS. Don't rely on GZIP-FINAL.
2015-03-01gnu: xfwm4: Add inputs libdrm and libxdamage.宋文武
* gnu/packages/xfce.scm (xfwm4): Add libdrm and libxdamage to inputs.
2015-03-01gnu: xfwm4: Update to 4.12.0.宋文武
* gnu/packages/xfce.scm (xfwm4): Update 4.12.0.
2015-03-01gnu: xfdesktop: Update to 4.12.0.宋文武
* gnu/packages/xfce.scm (xfdesktop): Update to 4.12.0.
2015-03-01gnu: thunar-volman: Update to 0.8.1.宋文武
* gnu/packages/xfce.scm (thunar-volman): Update to 0.8.1.
2015-03-01gnu: thunar: Update to 1.6.6.宋文武
* gnu/packages/xfce.scm (thunar): Update to 1.6.6.
2015-03-01gnu: xfce4-settings: Update to 4.12.0.宋文武
* gnu/packages/xfce.scm (xfce4-settings): Update to 4.12.0.
2015-03-01gnu: xfce4-session: Update to 4.12.0.宋文武
* gnu/packages/xfce.scm (xfce4-session): Update to 4.12.0.
2015-03-01gnu: xfce4-appfinder: Update to 4.12.0.宋文武
* gnu/packages/xfce.scm (xfce4-appfinder): Update to 4.12.0.
2015-03-01gnu: xfce4-panel: Update to 4.12.0.宋文武
* gnu/packages/xfce.scm (xfce4-panel): Update to 4.12.0.
2015-03-01gnu: tumbler: Update to 0.1.31.宋文武
* gnu/packages/xfce.scm (tumbler): Update to 0.1.31.
2015-03-01gnu: garcon: Update to 0.4.0.宋文武
* gnu/packages/xfce.scm (garcon): Update to 0.4.0.
2015-03-01gnu: exo: Update to 0.10.3.宋文武
* gnu/packages/xfce.scm (exo): Update to 0.10.3.
2015-03-01gnu: libxfce4ui: Update to 4.12.0.宋文武
* gnu/packages/xfce.scm (libxfce4ui): Update to 4.12.0.
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