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2019-12-20gnu: intel-mpi-benchmarks: Merge with "imb-openmpi".Ludovic Courtès
* gnu/packages/mpi.scm (intel-mpi-benchmarks): Remove. * gnu/packages/benchmark.scm (imb): Rename to... (intel-mpi-benchmarks): ... this. Change 'name'. Update to 2019.3. [arguments]: Remove 'build phase. Rewrite 'install phase. Pass #:parallel-build? and #:make-flags. (intel-mpi-benchmarks/openmpi): New variable. (imb-openmpi): Rewrite in terms of 'deprecated-package'.
2019-12-20gnupg: 'gnupg-verify*' returns a status symbol.Ludovic Courtès
This allows callers to distinguish between signature verification failure and missing key. * guix/gnupg.scm (gnupg-receive-keys): Return true on success. (gnupg-verify*): Check return value of 'gnupg-receive-keys'. Return two values, the first one being a symbol. * guix/upstream.scm (download-tarball): Get the two return values of 'gnupg-verify*', and match on the first one. * gnu/packages/bash.scm (download-patches): Check the first return value of 'gnupg-verify*'.
2019-12-20gnu: geda-gaf: Update to 1.10.0.Ricardo Wurmus
* gnu/packages/engineering.scm (geda-gaf): Update to 1.10.0. [arguments]: Adjust phase "disable-failing-tests". [inputs]: Add gamin and python-2.
2019-12-20gnu: Add gamin.Ricardo Wurmus
* gnu/packages/gnome.scm (gamin): New variable.
2019-12-20gnu: r-desolve: Update to 1.27.Ricardo Wurmus
* gnu/packages/cran.scm (r-desolve): Update to 1.27.
2019-12-20gnu: r-insol: Update to 1.2.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-insol): Update to 1.2.1. [propagated-inputs]: Remove r-rgdal.
2019-12-20gnu: r-plot3d: Update to 1.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-plot3d): Update to 1.3.
2019-12-20gnu: r-sctransform: Update to 0.2.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-sctransform): Update to 0.2.1. [propagated-inputs]: Remove r-future.
2019-12-20gnu: r-rootsolve: Update to 1.8.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-rootsolve): Update to 1.8.2.
2019-12-20gnu: r-reticulate: Update to 1.14.Ricardo Wurmus
* gnu/packages/cran.scm (r-reticulate): Update to 1.14. [propagated-inputs]: Add r-rappdirs.
2019-12-20gnu: r-pillar: Update to 1.4.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-pillar): Update to 1.4.3.
2019-12-20gnu: r-vctrs: Update to 0.2.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-vctrs): Update to 0.2.1.
2019-12-20gnu: r-recipes: Update to 0.1.8.Ricardo Wurmus
* gnu/packages/cran.scm (r-recipes): Update to 0.1.8.
2019-12-20gnu: r-psych: Update to 1.9.12.Ricardo Wurmus
* gnu/packages/cran.scm (r-psych): Update to 1.9.12.
2019-12-20gnu: r-bbmle: Update to 1.0.22.Ricardo Wurmus
* gnu/packages/cran.scm (r-bbmle): Update to 1.0.22. [propagated-inputs]: Add r-bdsmatrix, r-matrix, and r-mvtnorm.
2019-12-20gnu: Add r-bdsmatrix.Ricardo Wurmus
* gnu/packages/cran.scm (r-bdsmatrix): New variable.
2019-12-20gnu: r-latticeextra: Update to 0.6-29.Ricardo Wurmus
* gnu/packages/statistics.scm (r-latticeextra): Update to 0.6-29. [propagated-inputs]: Add r-jpeg and r-png.
2019-12-20gnu: r-dt: Update to 0.11.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dt): Update to 0.11.
2019-12-20gnu: r-rsqlite: Update to 2.1.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rsqlite): Update to 2.1.5.
2019-12-20gnu: r-mime: Update to 0.8.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mime): Update to 0.8.
2019-12-20gnu: r-bh: Update to 1.72.0-2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-bh): Update to 1.72.0-2.
2019-12-20gnu: r-foreign: Update to 0.8-73.Ricardo Wurmus
* gnu/packages/statistics.scm (r-foreign): Update to 0.8-73.
2019-12-20gnu: r-mass: Update to 7.3-51.5.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mass): Update to 7.3-51.5.
2019-12-20gnu: r-boot: Update to 1.3-24.Ricardo Wurmus
* gnu/packages/statistics.scm (r-boot): Update to 1.3-24.
2019-12-20gnu: r-scater: Update to 1.14.6.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.14.6.
2019-12-20gnu: WireGuard: Update to 0.0.20191219.Leo Famulari
* gnu/packages/vpn.scm (wireguard): Update to 0.0.20191219.
2019-12-20gnu: lepton-eda: Update to 1.9.9-20191003.Ricardo Wurmus
* gnu/packages/engineering.scm (lepton-eda): Update to 1.9.9-20191003. [inputs]: Do not inherit from geda-gaf; replace guile-2.0 with guile-2.2. [arguments]: Add phase to compile Scheme files.
2019-12-20gnu: catimg: Update to 2.6.0.Efraim Flashner
* gnu/packages/image-viewers.scm (catimg): Update to 2.6.0.
2019-12-20gnu: tig: Update to 2.5.0.Efraim Flashner
* gnu/packages/version-control.scm (tig): Update to 2.5.0.
2019-12-20gnu: vim-airline: Update to 0.11.Efraim Flashner
* gnu/packages/vim.scm (vim-airline): Update to 0.11.
2019-12-20gnu: mutt: Add preferred source uri.Efraim Flashner
* gnu/packages/mail.scm (mutt)[source]: Add upstream's preferred uri.
2019-12-20gnu: mutt: Update to 1.13.2.Efraim Flashner
* gnu/packages/mail.scm (mutt): Update to 1.13.2.
2019-12-20gnu: Add gnome-shell-extension-hide-app-icon.Leo Prikler
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-hide-app-icon): New variable. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-12-19gnu: libhandy: Update description.Jonathan Brielmaier
* gnu/packages/gnome.scm (libhandy)[description]: Fix typo and make clear it's not only for mobile interfaces. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-12-19gnu: Update libhandy to 0.0.12.Jonathan Brielmaier
* gnu/packages/gnome.scm (libhandy): Update to 0.0.12. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-12-19gnu: Add gnome-shell-extension-dash-to-panel.Giacomo Leidi
* gnu/packages/gnome-xyz.scm (gnome-shell-extension-dash-to-panel): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2019-12-19gnupg: Compile regexps only once.Ludovic Courtès
This halves the run time on a large number of subsequent 'gnupg-verify' calls. * guix/gnupg.scm (sigid-rx, goodsig-rx, validsig-rx, expkeysig-rx) (errsig-rx): New variables, lifted from... (gnupg-verify)[status-line->sexp]: ... here.
2019-12-19gnu: libfive: Update to 0-3.6e39254.Ricardo Wurmus
* gnu/packages/engineering.scm (libfive): Update to 0-3.6e39254. [arguments]: Add build phase "find-catch". [inputs]: Replace catch-framework with catch-framework2. [license]: Change license for library.
2019-12-19gnu: catch-framework2: Update to 2.1.2.Ricardo Wurmus
* gnu/packages/check.scm (catch-framework2): Update to 2.1.2. (catch-framework2-1): New variable. * gnu/packages/cpp.scm (fifo-map)[native-inputs]: Use catch-framework2-1.
2019-12-19gnu: Add java-piccolo2d-extras.Ricardo Wurmus
* gnu/packages/java-graphics.scm (java-piccolo2d-extras): New variable.
2019-12-19gnu: Add java-piccolo2d-core.Ricardo Wurmus
* gnu/packages/java-graphics.scm: New file. * gnu/local.mk (GNU_SYSTEM_MODULES): Add it.
2019-12-19gnu: sbcl: Update to 1.5.9.Pierre Neidhardt
* gnu/packages/lisp.scm (sbcl-boot0): New variable. Build 1.5.8 against CLISP. (sbcl): Build versions >= 1.5.9 against sbcl-boot0.
2019-12-19Update email for Brett Gilio.Brett Gilio
* .mailmap: Add name and email for Brett Gilio. * gnu/local.mk, gnu/packages/admin.scm, gnu/packages/audio.scm, gnu/packages/bittorrent.scm, gnu/packages/build-tools.scm, gnu/packages/cran.scm, gnu/packages/emacs-xyz.scm, gnu/packages/messaging.scm, gnu/packages/python-xyz.scm, gnu/packages/sml.scm, gnu/packages/terminals.scm, gnu/packages/wm.scm: Update email for Brett Gilio.
2019-12-19gnu: dxvk: Update to 1.5.Pierre Neidhardt
* gnu/packages/wine.scm (dxvk): Update to 1.5.
2019-12-19gnu: wireless-tools: Fix cross-compilation.Mathieu Othacehe
* gnu/packages/linux.scm (wireless-tools)[arguments]: Replace 'configure phase to substitute CC, AR and RANLIB Makefile variables to suitable values when cross-compiling.
2019-12-19gnu: behave: Fix tests.Julien Lepiller
* gnu/packages/check.scm (behave): Add missing directory to PYTHONPATH before tests.
2019-12-19gnu: isc-dhcp: Fix cross-compilation.Mathieu Othacehe
* gnu/packages/admin.scm (isc-dhcp)[arguments]: Add a configure flag to specify randomdev path, which is needed when cross-compiling. Also add a fix-bind-cross-compilation phase.
2019-12-19gnu: mumble: Update to 1.3.0.Ivan Vilata-i-Balaguer
* gnu/packages/telephony.scm (mumble): Update to 1.3.0. [source]: Remove patch. Update snippet. [build-system]: Switch to qt-build-system. [arguments]: Update custom 'configure phase. Add custom phase to disable murmur ice. [inputs]: Remove protobuf-3.5, libx11, qt-4, alsa-lib. Add protobuf, mesa, qtbase, qtsvg. [native-inputs]: Add python, qttools. [license]: Update license info. * gnu/packages/patches/mumble-1.2.19-abs.patch: Remove file. * gnu/local.mk (dist_patch_DATA): Remove it. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2019-12-19guix: Fix %hurd-systems list.Efraim Flashner
* guix/packages.scm (%hurd-systems): Replace i585-gnu with i586-gnu.
2019-12-19gnu: Fix python-pyside-2.John Soo
* gnu/packages/qt.scm (python-pyside-2)[inputs]: Remove llvm-6, clang-6. Add clang-toolchain-6. [arguments]: Adjust for change in inputs. Signed-off-by: Efraim Flashner <efraim@flashner.co.il>