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2017-12-15vm: Adapt qemu command to ARM.Mathieu Othacehe
* gnu/build/vm.scm (load-in-linux-vm): New argument #:target-arm32. Use it to adapt command for qemu-system-arm. This implies to choose a machine ("virt"), use the correct console port "ttyAMA0", disable KVM use that is buggy on some ARM boards (Odroid XU4 for example) and use user mode network stack instead of NIC. Gather all those options in a new variable "arch-specific-flags". * gnu/system/vm.scm (expression->derivation-in-linux-vm): Pass to load-in-linux-vm "#:target-arm32?" argument.
2017-12-15doc: Fix typo.Oleg Pykhalov
* doc/guix.texi (DNS Services): Fix knot-configuration.
2017-12-15gnu: ruby: Replace with ruby-2.4.3 [fixes CVE-2017-17405].Ben Woodcroft
* gnu/packages/ruby.scm (ruby-2.4.3): New variable. (ruby)[replacement]: New field.
2017-12-15gnu: bedtools: Update to 2.27.1.Ben Woodcroft
* gnu/packages/ruby.scm (bedtools): Update to 2.27.1.
2017-12-15gnu: ruby-2.2: Update to 2.2.9 [fixes CVE-2017-17405].Ben Woodcroft
* gnu/packages/ruby.scm (ruby-2.2): Update to 2.2.9.
2017-12-15gnu: ruby-2.3: Update to 2.3.6 [fixes CVE-2017-17405].Ben Woodcroft
* gnu/packages/ruby.scm (ruby-2.3): Update to 2.3.6.
2017-12-15gnu: yoshimi: Update to 1.5.5.Ricardo Wurmus
* gnu/packages/music.scm (yoshimi): Update to 1.5.5.
2017-12-15guix: ant-build-system: Do not compress jars.Ricardo Wurmus
Fixes <https://bugs.gnu.org/29700>. * guix/build/ant-build-system.scm (strip-jar-timestamps): Do not compress jar when repacking.
2017-12-14gnu: s-shell: Update to commit da2e5c20c0c5f477ec3426dc2584889a789b1659.ng0
* gnu/packages/shells.scm (s-shell): Update to commit da2e5c20c0c5f477ec3426dc2584889a789b1659. [version]: Use 'git-version'. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-14gnu: xpra: Update to 2.2.Rutger Helling
* gnu/packages/xorg.scm (xpra): Update to 2.2. [inputs]: Add python2-netifaces and python2-pyopengl-accelerate. Fix position of commas. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2017-12-14gnu: Add python2-pyopengl-accelerate.Rutger Helling
* gnu/packages/python.scm (python2-pyopengl-accelerate): New variable. Co-authored-by: Ludovic Courtès <ludo@gnu.org>
2017-12-14gnu: python-scikit-learn: Patch test non-determinism.Ben Woodcroft
* gnu/packages/patches/python-scikit-learn-fix-test-non-determinism.patch: New file. * gnu/packages/machine-learning.scm (python-scikit-learn)[source]: Use it. * gnu/local.mk (dist_patch_DATA): Add it.
2017-12-14gnu: diamond: Update to 0.9.14.Ben Woodcroft
* gnu/packages/bioinformatics.scm (diamond): Update to 0.9.14.
2017-12-14gnu: gucharmap: Use glib-or-gtk-build-system.Andy Wingo
* gnu/packages/gnome.scm (gucharmap): Use glib-or-gtk-build-system.
2017-12-13gnu: Erlang: Update to 20.1.7 [fixes CVE-2017-1000385].Leo Famulari
* gnu/packages/erlang.scm (erlang): Update to 20.1.7 (native-inputs): Use version-major+minor in the URI of erlang-manpages.
2017-12-14gnu: youtube-dl: Update to 2017.12.14.Tobias Geerinckx-Rice
* gnu/packages/video.scm (youtube-dl): Update to 2017.12.14.
2017-12-14gnu: r-caret: Update to 6.0-78.Tobias Geerinckx-Rice
* gnu/packages/statistics.scm (r-caret): Update to 6.0-78
2017-12-14gnu: r-domc: Update to 1.3.5.Tobias Geerinckx-Rice
* gnu/packages/statistics.scm (r-domc): Update to 1.3.5
2017-12-14gnu: perl-text-bibtex: Update to 0.85.Tobias Geerinckx-Rice
* gnu/packages/tex.scm (perl-text-bibtex): Update to 0.85
2017-12-14gnu: perl-test-requires: Update to 0.10.Tobias Geerinckx-Rice
* gnu/packages/perl-check.scm (perl-test-requires): Update to 0.10
2017-12-14gnu: perl-test-pod: Update to 1.51.Tobias Geerinckx-Rice
* gnu/packages/perl-check.scm (perl-test-pod): Update to 1.51 [source]: Update URI.
2017-12-14gnu: perl-test-mocktime: Update to 0.15.Tobias Geerinckx-Rice
* gnu/packages/perl-check.scm (perl-test-mocktime): Update to 0.15 [propagated-inputs]: Add perl-time-piece.
2017-12-14gnu: Add perl-time-piece.Tobias Geerinckx-Rice
* gnu/packages/perl.scm (perl-time-piece): New public variable.
2017-12-13hydra: Pre-load the compiler.Ludovic Courtès
Starting from Guile 2.2.3, '%fresh-auto-compile' does what it says and would auto-compile everything, including the compiler (see <https://bugs.gnu.org/29226>). * build-aux/hydra/gnu-system.scm: Call 'compile'.
2017-12-13hydra: Invalidate derivation caches after each architecture evaluation.Ludovic Courtès
This reduces max RSS from 1.3G to 1.0G. * guix/derivations.scm (invalidate-derivation-caches!): New procedure. * build-aux/hydra/gnu-system.scm (hydra-jobs): Use it. Add 'format' call.
2017-12-13memoization: Add 'invalidate-memoization!.Ludovic Courtès
* guix/memoization.scm (%make-hash-table*): When not profiling, add the new table to %MEMOIZATION-TABLES. (invalidate-memoization!): New procedure.
2017-12-13derivations: Don't memoize 'derivation-hash'.Ludovic Courtès
This has little or no run-time impact and slightly reduces the memory footprint. * guix/derivations.scm (derivation-hash): Replace 'mlambda' with 'lambda'.
2017-12-13derivations: Split 'derivation-hash' in two procedures.Ludovic Courtès
* guix/derivations.scm (derivation/masked-inputs): New procedure. (derivation-hash): Use it instead of the inline code.
2017-12-13gnu: notmuch: Move elisp directory and generate autoloads.Arun Isaac
* gnu/packages/mail.scm (notmuch)[arguments]: Move elisp files to share/emacs/site-lisp/guix.d/notmuch-<version>. Add make-autoloads phase.
2017-12-13pull: Add (guix profiling) to the build environment.Ludovic Courtès
Reported by Ricardo Wurmus. * build-aux/build-self.scm (build): Add (guix profiling).
2017-12-13Revert "derivations: 'derivation-hash' assumes inputs are coalesced."Ludovic Courtès
This reverts commit 1d008d9f8c44dfdb808235d451b72f255e72f103. Reported by Rutger Helling <rhelling@mykolab.com>. Fixes <https://bugs.gnu.org/29689>.
2017-12-13gnu: polyml: Update to 5.7.1.Tobias Geerinckx-Rice
* gnu/packages/sml.scm (polyml): Update to 5.7.1.
2017-12-13gnu: guile-gdbm-ffi: Install documentation.Tobias Geerinckx-Rice
* gnu/packages/guile.scm (guile-gdbm-ffi)[arguments]: Install README.md and some examples. Tidy up MKDIR-P calls.
2017-12-13gnu: gtksourceview: Update to 3.24.6.Tobias Geerinckx-Rice
* gnu/packages/gtk.scm (gtksourceview): Update to 3.24.6
2017-12-13vm: Use qemu drive device parameter.Mathieu Othacehe
* gnu/build/vm.scm (load-in-linux-vm): Use device parameter to define drive device.
2017-12-13gnu: cgit: Patch absolute file names.Oleg Pykhalov
* gnu/packages/version-control.scm (cgit): Patch absolute file names.
2017-12-12gnu: Add krita.Mark Meyer
* gnu/packages/kde.scm (krita): New variable. Signed-off-by: Kei Kebreau <kkebreau@posteo.net>
2017-12-12doc: Fix typo.Tobias Geerinckx-Rice
* doc/guix.texi: Add missing ‘@*’ to copyright headers.
2017-12-12gnu: xfig: Update to 3.2.6a.Tobias Geerinckx-Rice
* gnu/packages/xfig.scm (xfig): Update to 3.2.6a. [native-inputs]: Remove groff, imake, makedepend. Add desktop-file-utils. [inputs]: Remove libxmu and zlib. [arguments]: Remove custom phases. Add a ‘strip-bogus-exec-prefix’ phase. Run the rudimentary test suite.
2017-12-12gnu: services: Add php-fpm.nee
* gnu/services/web.scm (<php-fpm-configuration>, <php-fpm-process-manager-configuration>): New record types. (php-fpm-configuration?, php-fpm-process-manager-configuration?, php-fpm-service-type, nginx-php-location): New procedures. * doc/guix.texi (Web-Services): Document php-fpm service. * gnu/tests/web.scm: Add php-fpm system test. Signed-off-by: Christopher Baines <mail@cbaines.net>
2017-12-12gnu: meson: Update to 0.44.0.Tobias Geerinckx-Rice
* gnu/packages/build-tools.scm (meson): Update to 0.44.0
2017-12-12gnu: miniupnpc: Update to 2.0.20171212.Tobias Geerinckx-Rice
* gnu/packages/upnp.scm (miniupnpc): Update to 2.0.20171212.
2017-12-12gnu: global: Update to 6.6.Efraim Flashner
* gnu/packages/code.scm (global): Update to 6.6.
2017-12-12derivations: 'derivation-hash' assumes inputs are coalesced.Ludovic Courtès
* guix/derivations.scm (derivation-hash): Remove redundant 'coalesce-duplicate-inputs' call.
2017-12-12derivations: Use 'define-immutable-record-type' as appropriate.Ludovic Courtès
This is a followup to dc673fa1131fb5d1e5ca29acb4a693cfb906986f. * guix/derivations.scm (<derivation-output>, <derivation-input>): Use 'define-immutable-record-type'.
2017-12-12memoization: Profiling support keeps track of lookups and hits.Ludovic Courtès
* guix/memoization.scm (<cache>): New record type. (define-lookup-procedure, define-update-procedure): New macros. (cache-ref, cacheq-ref, cache-set!, cacheq-set!): New procedures. (cached/mv, cachedq/mv, cached, cachedq): Use them instead of 'hash-ref' and 'hash-set!'. (%make-hash-table*): When 'profiled?' returns true, return a <cache> object. (define-cache-procedure): Adjust to show cache lookups and hits.
2017-12-12memoization: Add profiling support.Ludovic Courtès
* guix/memoization.scm (%memoization-tables): New variable. (%make-hash-table*, show-memoization-tables): New procedures. (make-hash-table*): New macro. Add top-level call to 'register-profiling-hook!'. (memoize): Adjust to pass the resulting procedure to 'make-hash-table*'. (%mlambda): Likewise.
2017-12-12Add (guix profiling).Ludovic Courtès
* guix/profiling.scm: New file. * Makefile.am (MODULES): Add it. * guix/store.scm (record-operation): Use 'profiled?' and 'register-profiling-hook!'.
2017-12-12gnu: xfig, transfig: Update home pages.Tobias Geerinckx-Rice
* gnu/packages/xfig.scm (xfig, transfig)[home-page]: Use SourceForge.net.
2017-12-12gnu: Add uthash.Tobias Geerinckx-Rice
* gnu/packages/datastructures.scm (uthash): New public variable.
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