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2020-07-16services: Add ganeti.Marius Bakke
* gnu/services/ganeti.scm, gnu/tests/ganeti.scm: New files. * doc/guix.texi (Virtualization Services): Document the Ganeti services.
2020-07-16gnu: Add ganeti-instance-debootstrap.Marius Bakke
* gnu/packages/virtualization.scm (ganeti-instance-debootstrap): New public variable.
2020-07-16gnu: Add ganeti-instance-guix.Marius Bakke
* gnu/packages/virtualization.scm (ganeti-instance-guix): New public variable.
2020-07-16gnu: Add ganeti.Marius Bakke
* gnu/packages/virtualization.scm (system->qemu-target, ganeti): New variables. * gnu/packages/patches/ganeti-deterministic-manual.patch, gnu/packages/patches/ganeti-disable-version-symlinks.patch, gnu/packages/patches/ganeti-drbd-compat.patch, gnu/packages/patches/ganeti-haskell-pythondir.patch, gnu/packages/patches/ganeti-os-disk-size.patch, gnu/packages/patches/ganeti-preserve-PYTHONPATH.patch, gnu/packages/patches/ganeti-shepherd-master-failover.patch, gnu/packages/patches/ganeti-shepherd-support.patch: New files. * gnu/local.mk (dist_patch_DATA): Adjust accordingly.
2020-07-16gnu: linux-libre: Update to 5.4.52.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.4-version): Update to 5.4.52. (linux-libre-5.4-pristine-source): Update hash. (linux-libre-5.4-source): Remove %linux-libre-fix-atheros-9271-patch.
2020-07-16gnu: linux-libre@5.7: Update to 5.7.9.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-5.7-version): Update to 5.7.9. (linux-libre-5.7-pristine-source): Update hash. (linux-libre-5.7-source): Remove %linux-libre-fix-atheros-9271-patch.
2020-07-16gnu: linux-libre@4.19: Update to 4.19.133.Mark H Weaver
* gnu/packages/linux.scm (linux-libre-4.19-version): Update to 4.19.133. (linux-libre-4.19-pristine-source): Update hash. (linux-libre-4.19-source): Remove %linux-libre-fix-atheros-9271-patch.
2020-07-16guix-install.sh: Make sure /etc/profile is sourced.Tobias Geerinckx-Rice
New users regularly report missing newly-installed programmes and icons. * etc/guix-install.scm (main): Tell users to log out & back in.
2020-07-16guix-install.sh: Suggest running gpg as root.Tobias Geerinckx-Rice
The original example regularly prevented new users from installing Guix at all. * etc/guix-install.scm (chk_gpg_keyring): Suggest ‘sudo -i gpg’.
2020-07-16gnu: kyotocabinet: Use HTTPS.Tobias Geerinckx-Rice
* gnu/packages/databases.scm (kyotocabinet)[source, home-page]: Use HTTPS.
2020-07-16gnu: java-xmlunit: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/java.scm (java-xmlunit)[home-page]: Use HTTPS.
2020-07-16gnu: libyaml: Use HTTPS.Tobias Geerinckx-Rice
* gnu/packages/web.scm (libyaml)[source, home-page]: Use HTTPS.
2020-07-16gnu: Use HTTPS for mdc-berlin.de home pages.Tobias Geerinckx-Rice
* gnu/packages/bioinformatics.scm (r-genomation, r-genomationdata, pigx-rnaseq) (pigx-chipseq, pigx-bsseq, pigx-scrnaseq, pigx)[home-page]: Use HTTPS.
2020-07-16gnu: Use HTTPS for biojava.org home pages.Tobias Geerinckx-Rice
* gnu/packages/bioinformatics.scm (java-biojava-core) (java-biojava-phylo, java-biojava-alignment, java-biojava-phylo-4.0) (java-biojava-alignment-4.0)[home-page]: Use HTTPS.
2020-07-16gnu: jack@0.125.0: Update URIs.Tobias Geerinckx-Rice
gnu/packages/audio.scm (jack-1)[source]: Use a working mirror. [home-page]: Use HTTPS.
2020-07-16gnu: Use HTTPS for igraph.org.Tobias Geerinckx-Rice
* gnu/packages/graph.scm (igraph, r-igraph)[home-page]: Use HTTPS.
2020-07-16gnu: ghc-pandoc-types: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/haskell-xyz.scm (ghc-pandoc-types)[home-page]: Use HTTPS.
2020-07-16gnu: Use HTTPS for www.yesodweb.com.Tobias Geerinckx-Rice
* gnu/packages/haskell-web.scm (ghc-css-text, ghc-yesod-persistent) [home-page]: Use HTTPS.
2020-07-16gnu: Use HTTPS for github.com (and subdomains) home pages.Tobias Geerinckx-Rice
* gnu/packages/bioconductor.scm (r-qvalue)[home-page]: Use HTTPS and follow permanent redirection. * gnu/packages/check.scm (python-codecov, python-nosexcover) [home-page]: Likewise. * gnu/packages/cran.scm (r-ffbase, r-ggrepel, r-valr) [home-page]: Likewise. * gnu/packages/crates-io.scm (rust-block-0.1, rust-dispatch-0.1) (rust-objc-0.2, rust-objc-exception-0.1) (rust-objc-foundation-0.1, rust-objc-id-0.1, rust-objc-test-utils-0.0) (rust-onig-5.0, rust-onig-sys-69.2, rust-vergen-3.1) [home-page]: Likewise. * gnu/packages/finance.scm (ledger-agent, keepkey-agent) [home-page]: Likewise. * gnu/packages/haskell-check.scm (ghc-tasty-expected-failure) [home-page]: Likewise. * gnu/packages/haskell-web.scm (ghc-bsb-http-chunked, ghc-warp) (ghc-warp-tls)[home-page]: Likewise. * gnu/packages/haskell-xyz.scm (ghc-configurator, ghc-hasktags) (ghc-linear, ghc-newtype-generics, ghc-retry, ghc-xdg-basedir) (ghc-pretty-show)[home-page]: Likewise. * gnu/packages/java.scm (java-javax-inject)[home-page]: Likewise. * gnu/packages/libffi.scm (ruby-ffi)[home-page]: Likewise. * gnu/packages/linux.scm (procenv)[home-page]: Likewise. * gnu/packages/python-web.scm (python-aiodns, python-flask-htpasswd) (python-pycares)[home-page]: Likewise. * gnu/packages/python-xyz.scm (python-progressbar33, python-whatever) (python-funcy)[home-page]: Likewise. * gnu/packages/ruby.scm (ruby-rubyzip, ruby-spinach, ruby-gherkin-ruby) (ruby-code-statistics, ruby-colorize, ruby-wwtd)[home-page]: Likewise.
2020-07-16gnu: Update Haskell Wiki URIs.Tobias Geerinckx-Rice
* gnu/packages/haskell-web.scm (ghc-hxt-regex-xmlschema)[home-page]: Use HTTPS and follow permanent redirection. * gnu/packages/haskell-xyz.scm (ghc-alsa-core, ghc-base-unicode-symbols) (ghc-colour, ghc-data-accessor, ghc-data-accessor-transformers) (ghc-gluraw, ghc-glut, ghc-gnuplot, ghc-haddock-test, ghc-opengl) (ghc-openglraw, ghc-storablevector)[home-page]: Likewise.
2020-07-16gnu: bombadillo: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/web-browsers.scm (bombadillo)[home-page]: Use HTTPS.
2020-07-16gnu: lsof: Use HTTPS home page.Tobias Geerinckx-Rice
* gnu/packages/lsof.scm (lsof)[home-page]: Use HTTPS.
2020-07-16gnu: lirc: Use HTTPS home page.Tobias Geerinckx-Rice
Also add a missing copyright line for an obvious nckx phase. * gnu/packages/lirc.scm (lirc)[home-page]: Use HTTPS.
2020-07-16gnu: lv2: Use HTTPS.Tobias Geerinckx-Rice
* gnu/packages/audio.scm (lv2)[source, home-page]: Use HTTPS.
2020-07-16gnu: Add cl-opticl.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-opticl, cl-opticl): New variables.
2020-07-16gnu: Add cl-pngload.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-pngload, cl-pngload, ecl-pngload): New variables.
2020-07-16gnu: Add cl-zpb-exif.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-zpb-exif, cl-zpb-exif, ecl-zpb-exif): New variables.
2020-07-16gnu: Add cl-3bz.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-3bz, cl-3bz, ecl-3bz): New variables.
2020-07-16gnu: Add cl-mmap.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-mmap, cl-mmap, ecl-mmap): New variables.
2020-07-16gnu: Add cl-retrospectiff.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-retrospectiff, cl-retrospectiff, ecl-retrospectiff): New variables.
2020-07-16gnu: Add cl-opticl-core.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-opticl-core, cl-opticl-core, ecl-opticl-core): New variables.
2020-07-16gnu: Add cl-freetype2.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-freetype2, cl-freetype2, ecl-freetype2): New variables.
2020-07-16gnu: Add cl-skippy.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-skippy, cl-skippy, ecl-skippy): New variables.
2020-07-16gnu: Add cl-deflate.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-deflate, cl-deflate, ecl-deflate): New variables.
2020-07-16gnu: Add cl-com.gigamonkeys.binary-data.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-com.gigamonkeys.binary-data, cl-com.gigamonkeys.binary-data, ecl-com.gigamonkeys.binary-data): New variables.
2020-07-16gnu: Add cl-tga.Guillaume Le Vaillant
* gnu/packages/lisp-xyz.scm (sbcl-tga, cl-tga, ecl-tga): New variables.
2020-07-16gnu: r-quantreg: Update to 5.61.Ricardo Wurmus
* gnu/packages/statistics.scm (r-quantreg): Update to 5.61. [propagated-inputs]: Add r-conquer.
2020-07-16gnu: r-r-rsp: Update to 0.44.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.44.0.
2020-07-16gnu: r-tibble: Update to 3.0.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-tibble): Update to 3.0.3.
2020-07-16gnu: r-rlang: Update to 0.4.7.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rlang): Update to 0.4.7.
2020-07-16gnu: r-brms: Update to 2.13.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-brms): Update to 2.13.3.
2020-07-16gnu: r-gamlss: Update to 5.1-7.Ricardo Wurmus
* gnu/packages/cran.scm (r-gamlss): Update to 5.1-7.
2020-07-16gnu: r-gamlss-dist: Update to 5.1-7.Ricardo Wurmus
* gnu/packages/cran.scm (r-gamlss-dist): Update to 5.1-7.
2020-07-16gnu: r-pillar: Update to 1.4.6.Ricardo Wurmus
* gnu/packages/cran.scm (r-pillar): Update to 1.4.6. [propagated-inputs]: Add r-ellipsis and r-lifecycle.
2020-07-16gnu: r-mice: Update to 3.10.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-mice): Update to 3.10.0. [propagated-inputs]: Add r-generics.
2020-07-16gnu: r-broom: Update to 0.7.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-broom): Update to 0.7.0. [propagated-inputs]: Remove r-nlme and r-reshape2; add r-ellipsis, r-glue, and r-rlang.
2020-07-16gnu: r-rhdf5lib: Update to 1.10.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.10.1.
2020-07-16gnu: r-qtl2: Update to 0.22-11.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-qtl2): Update to 0.22-11.
2020-07-16gnu: r-genomicfeatures: Update to 1.40.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.40.1.
2020-07-16gnu: r-summarizedexperiment: Update to 1.18.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-summarizedexperiment): Update to 1.18.2.
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