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2015-09-21gnu: Add r-highr.Vicente Vera Parra
* gnu/packages/statistics.scm (r-highr): New variable.
2015-09-21gnu: Add r-formatr.Vicente Vera Parra
* gnu/packages/statistics.scm (r-formatr): New variable.
2015-09-21gnu: Add r-evaluate.Vicente Vera Parra
* gnu/packages/statistics.scm (r-evaluate): New variable.
2015-09-21gnu: Add r-bh.Vicente Vera Parra
* gnu/packages/statistics.scm (r-bh): New variable.
2015-09-21gnu: Use cran-uri in source expressions.Ricardo Wurmus
* gnu/packages/statistics.scm (r-colorspace, r-dichromat, r-digest, r-gtable, r-labeling, r-magrittr, r-munsell, r-rcpp, r-plyr, r-proto, r-rcolorbrewer, r-stringi, r-stringr, r-reshape2, r-scales, r-ggplot2, r-assertthat, r-lazyeval, r-dbi): Use cran-uri in source expressions.
2015-09-21import: cran-sxml->sexp: Use cran-uri in package expression.Ricardo Wurmus
* guix/import/cran.scm (cran-sxml->sexp): Use the cran-uri procedure in the generated package expression.
2015-09-21build: Add cran-uri procedure.Ricardo Wurmus
* guix/build-system/r.scm (cran-uri): New procedure.
2015-09-21gnu: Add shotwell.Ricardo Wurmus
* gnu/packages/gnome.scm (shotwell): New variable.
2015-09-21gnu: Add gexiv2.Ricardo Wurmus
* gnu/packages/gnome.scm (gexiv2): New variable.
2015-09-21gnu: Add libgee.Ricardo Wurmus
* gnu/packages/gnome.scm (libgee): New variable.
2015-09-20gnu: autogen: Update to 5.18.6.Eric Bavier
* gnu/packages/autogen.scm (autogen): Update to 5.18.6.
2015-09-20gnu: gnu-pw-mgr: Update to 1.5.Eric Bavier
* gnu/packages/gnu-pw-mgr.scm (gnu-pw-mgr): Update to 1.5.
2015-09-20Thank Petter.Ludovic Courtès
2015-09-20linux-initrd: Add LUKS/dm-crypt modules to the initrd.Ludovic Courtès
Suggested by Petter <petter@mykolab.ch> and Mark H Weaver <mhw@netris.org>. Partly fixes <http://bugs.gnu.org/19190>. * gnu/system/linux-initrd.scm (base-initrd)[linux-modules]: Add dm-crypt and xts.
2015-09-20linux-boot: Mount /dev as a devtmpfs from the start.Ludovic Courtès
Suggested by Petter <petter@mykolab.ch> and Mark H Weaver <mhw@netris.org>. Reported by Duncan Keall <duncan@duncankeall.com>. Partly fixes <http://bugs.gnu.org/19190> by populating /dev/mapper early enough. * gnu/build/linux-boot.scm (mount-essential-file-systems): Mount /dev as a devtmpfs. (move-essential-file-systems): Add /dev. (mount-root-file-system): Mount /rw-root/dev as a devtmpfs instead of calling 'make-essential-device-nodes'. (boot-system): Remove call to 'make-essential-device-nodes'. * gnu/system/file-systems.scm (%devtmpfs-file-system): Remove. * doc/guix.texi (File Systems): Adjust accordingly.
2015-09-20gnu: openal: Use full path to audio backend libraries.Ricardo Wurmus
* gnu/packages/audio.scm (openal)[arguments]: Add build phase to patch in the full paths to backend audio libraries.
2015-09-20gnu: vpnc: Use https for source URL.Ricardo Wurmus
* gnu/packages/vpn.scm (vpnc)[source]: Use https protocol for source URL.
2015-09-20gnu: lilypond: Update to 2.19.27.Ricardo Wurmus
* gnu/packages/music.scm (lilypond): Update to 2.19.27. [inputs]: Add font-tex-gyre.
2015-09-20gnu: sfml: Update to 2.3.2.Ricardo Wurmus
* gnu/packages/game-development.scm (sfml): Update to 2.3.2. [native-inputs]: Remove.
2015-09-20gnu: Add python2-keyring.Cyril Roelandt
* gnu/packages/python.scm (python2-keyring): New variable.
2015-09-20gnu: Add python2-pyflakes and fix python2-pyflakes-0.8.1.Cyril Roelandt
* gnu/packages/python.scm (python2-pyflakes): New variable. * gnu/packages/python.scm (python2-pyflakes-0.8.1): Fix the definition.
2015-09-20gnu: Add python-prettytableCyril Roelandt
* gnu/packages/python.scm (python-prettytable, python2-prettytable): New variables.
2015-09-19gnu: avahi: Enable libdns_sd compatibility.David Thompson
* gnu/packages/avahi.scm (avahi): Add '--enable-compat-libdns_sd' configure flag.
2015-09-19gnu: icu4c: Add fixes for CVE-2014-6585 and CVE-2015-1270.Mark H Weaver
* gnu/packages/patches/icu4c-CVE-2014-6585.patch, gnu/packages/patches/icu4c-CVE-2015-1270.patch: New files. * gnu-system.am (dist_patch_DATA): Add them. * gnu/packages/icu4c.scm (icu4c)[source]: Add patches.
2015-09-20gnu: Add R/qtl.Andreas Enge
* gnu/packages/bioinformatics.scm (r-qtl): New variable. Co-authored-by: Pjotr Prins <pjotr.guix@thebird.nl>
2015-09-19gnu: libmtp: Add additional MTP devices.Andreas Enge
* gnu/packages/patches/libmtp-devices.patch: New file. * gnu-system.am (dist_patch_DATA): Register patch. * gnu/packages/patches/libmtp-devices.patch (libmtp)[source]: Add patch.
2015-09-19gnu: gtk+: Adapt pre-configure phase to version 3.16.6.Mark H Weaver
This is a followup to commit a35b8fc6c4ca9b0810db9c8b20bb76158dd66995. * gnu/packages/gtk.scm (gtk+)[arguments]: In 'pre-configure' phase, remove substitutions of 'gtk-update-icon-cache' in demo Makefiles.
2015-09-19gnu: Add bioruby.Pjotr Prins
* gnu/packages/bioinformatics.scm (bioruby): New variable.
2015-09-19gnu: Add ruby-libxml.Pjotr Prins
* gnu/packages/ruby.scm (ruby-libxml): New variable.
2015-09-19gnu: Add ruby-shindo.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-shindo): New variable.
2015-09-19gnu: Add ruby-formatador.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-formatador): New variable.
2015-09-19gnu: Add ruby-notiffany.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-notiffany): New variable.
2015-09-19gnu: Add ruby-shellany.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-shellany): New variable.
2015-09-19gnu: Add ruby-nenv.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-nenv): New variable.
2015-09-19gnu: Add ruby-lumberjack.Ricardo Wurmus
* gnu/packages/ruby.scm (ruby-lumberjack): New variable.
2015-09-19gnu: Add ruby-docile.Pjotr Prins
* gnu/packages/ruby.scm (ruby-docile): New variable.
2015-09-18gnu: ifstatus: Fix license.Ludovic Courtès
* gnu/packages/networking.scm (ifstatus)[license]: Set to GPL2+.
2015-09-18lint: Report lonely parentheses.Ludovic Courtès
* guix/scripts/lint.scm (%hanging-paren-rx): New variable. (report-lone-parentheses): New procedure. (%formatting-reporters): Use it. * tests/lint.scm ("formatting: lonely parentheses"): New test.
2015-09-18gnu: Add ifstatus.Stefan Reichoer
* gnu/packages/networking.scm (ifstatus): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2015-09-18store: Add 'set-build-options*'.Alex Kost
Suggested by: Ludovic Courtès <ludo@gnu.org>. * guix/store.scm (set-build-options*): New procedure.
2015-09-18ui: Add 'show-derivation-outputs'.Alex Kost
* guix/scripts/build.scm (guix-build): Extract code from here and move to... * guix/ui.scm (show-derivation-outputs): ... here. New procedure.
2015-09-18Add (guix scripts).Alex Kost
* guix/ui.scm: Add missing copyright lines. (args-fold*, environment-build-options, %default-argument-handler, parse-command-line): Move to ... * guix/scripts.scm: ...here. New file. * guix/scripts/archive.scm: Use it. * guix/scripts/build.scm: Likewise. * guix/scripts/download.scm: Likewise. * guix/scripts/edit.scm: Likewise. * guix/scripts/environment.scm: Likewise. * guix/scripts/gc.scm: Likewise. * guix/scripts/graph.scm: Likewise. * guix/scripts/hash.scm: Likewise. * guix/scripts/import/cpan.scm: Likewise. * guix/scripts/import/cran.scm: Likewise. * guix/scripts/import/elpa.scm: Likewise. * guix/scripts/import/gem.scm: Likewise. * guix/scripts/import/gnu.scm: Likewise. * guix/scripts/import/hackage.scm: Likewise. * guix/scripts/import/nix.scm: Likewise. * guix/scripts/import/pypi.scm: Likewise. * guix/scripts/lint.scm: Likewise. * guix/scripts/package.scm: Likewise. * guix/scripts/publish.scm: Likewise. * guix/scripts/pull.scm: Likewise. * guix/scripts/refresh.scm: Likewise. * guix/scripts/size.scm: Likewise. * guix/scripts/system.scm: Likewise. * tests/ui.scm (with-environment-variable, "parse-command-line", "parse-command-line and --no options"): Move to ... * tests/scripts.scm: ...here. New file. * Makefile.am (MODULES): Add guix/scripts.scm. (SCM_TESTS): Add tests/scripts.scm. * po/guix/POTFILES.in: Add guix/scripts.scm.
2015-09-18emacs: Replace 'guix-any' with 'cl-some'.Alex Kost
* emacs/guix-utils.el (guix-any): Remove. * emacs/guix-command.el (guix-command-improve-argument): Use 'cl-some' instead of 'guix-any'.
2015-09-18emacs: Add commands to show/hide build log phases.Alex Kost
Suggested by Ludovic Courtès <ludo@gnu.org>. * emacs/guix-build-log.el (guix-build-log-phase-end-regexp): New variable. (guix-build-log-phase-start, guix-build-log-phase-end, guix-build-log-phase-hide, guix-build-log-phase-show, guix-build-log-phase-hidden-p, guix-build-log-phase-toggle-function, guix-build-log-phase-toggle, guix-build-log-phase-toggle-all): New functions. (guix-build-log-mode-map): Add 'TAB'/'S-TAB' key bindings. * doc/emacs.texi (Emacs Build Log): Document them.
2015-09-18gnu: Add scmutils.Federico Beffa
* gnu/packages/scheme.scm (scmutils): New variable.
2015-09-17gnu: Add ruby-bio-logger.Pjotr Prins
* gnu/packages/ruby.scm (ruby-bio-logger): New variable.
2015-09-17download: Only show hours in the elapsed time if necessary.Steve Sprang
* guix/build/download.scm (seconds->string): Conditionally include hours in timestamp. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2015-09-17gnu: guile: Add guile-nextChristopher Allan Webber
* gnu/packages/guile.scm (guile-next): New variable. * gnu/packages/guile.scm (guile-for-guile-emacs): Adjust to inherit from guile-next rather than guile-2.0 Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2015-09-17gnu: harfbuzz: Comment on the "bin" output.宋文武
* gnu/packages/gtk.scm (harfbuzz): Comment on why "bin" output.
2015-09-17gnu: Add emacs-typo.Ludovic Courtès
* gnu/packages/emacs.scm (typo): New variable.
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