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2018-09-05gnu: r-glue: Update to 1.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-glue): Update to 1.3.0.
2018-09-05gnu: r-callr: Update to 3.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-callr): Update to 3.0.0. [propagated-inputs]: Add r-base64enc.
2018-09-05gnu: r-reprex: Update to 0.2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-reprex): Update to 0.2.0. [propagated-inputs]: Add r-clipr, r-rlang, and r-withr.
2018-09-05gnu: r-reticulate: Update to 1.10.Ricardo Wurmus
* gnu/packages/cran.scm (r-reticulate): Update to 1.10.
2018-09-05gnu: r-doby: Update to 4.6-2.Ricardo Wurmus
* gnu/packages/cran.scm (r-doby): Update to 4.6-2.
2018-09-05gnu: Add r-flextable.Ricardo Wurmus
* gnu/packages/cran.scm (r-flextable): New variable.
2018-09-05gnu: r-rmarkdown: Use latest version of Pandoc.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rmarkdown)[propagated-inputs]: Replace "ghc-pandoc-1" with "ghc-pandoc".
2018-09-05Revert "gnu: ghc-tasty: Update to 1.1.0.3."Ricardo Wurmus
This reverts commit 3ad6b8909025a8f4d3e1f1f5ea16bcd0cace557c.
2018-09-05Revert "gnu: ghc-base-compat: Update to 0.10.4."Ricardo Wurmus
This reverts commit 0fa2c552fcd5176b0484b77b7f7c94d82d46415e. We may not upgrade base-compat at this point because we haven't upgraded the default GHC yet.
2018-09-05gnu: Add r-moonbook.Ricardo Wurmus
* gnu/packages/cran.scm (r-moonbook): New variable.
2018-09-05gnu: Add r-nortest.Ricardo Wurmus
* gnu/packages/cran.scm (r-nortest): New variable.
2018-09-05gnu: Add r-sjmisc.Ricardo Wurmus
* gnu/packages/cran.scm (r-sjmisc): New variable.
2018-09-05gnu: Add r-sjlabelled.Ricardo Wurmus
* gnu/packages/cran.scm (r-sjlabelled): New variable.
2018-09-05gnu: Add r-prediction.Ricardo Wurmus
* gnu/packages/cran.scm (r-prediction): New variable.
2018-09-05gnu: Add r-snakecase.Ricardo Wurmus
* gnu/packages/cran.scm (r-snakecase): New variable.
2018-09-05gnu: Add r-officer.Ricardo Wurmus
* gnu/packages/cran.scm (r-officer): New variable.
2018-09-05gnu: r-googlesheets: Update to 0.3.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-googlesheets): Update to 0.3.0. [propagated-inputs]: Add r-tibble.
2018-09-05gnu: r-plotly: Update to 4.8.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-plotly): Update to 4.8.0. [propagated-inputs]: Add r-promises and r-rlang.
2018-09-05gnu: r-matrixstats: Update to 0.54.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-matrixstats): Update to 0.54.0.
2018-09-05gnu: r-r-rsp: Update to 0.43.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-rsp): Update to 0.43.0.
2018-09-05gnu: r-r-utils: Update to 2.7.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-r-utils): Update to 2.7.0.
2018-09-05gnu: r-e1071: Update to 1.7-0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-e1071): Update to 1.7-0.
2018-09-05gnu: r-xml: Update to 3.98-1.16.Ricardo Wurmus
* gnu/packages/statistics.scm (r-xml): Update to 3.98-1.16.
2018-09-05gnu: r-rcpparmadillo: Update to 0.9.100.5.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.100.5.0.
2018-09-05gnu: r-git2r: Update to 0.23.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-git2r): Update to 0.23.0. [native-inputs]: Add pkg-config.
2018-09-05gnu: r-roxygen2: Update to 6.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-roxygen2): Update to 6.1.0. [propagated-inputs]: Add r-pkgload and r-purrr. [native-inputs]: Add r-knitr.
2018-09-05gnu: r-ade4: Update to 1.7-13.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ade4): Update to 1.7-13.
2018-09-05gnu: r-xtable: Update to 1.8-3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-xtable): Update to 1.8-3.
2018-09-05gnu: r-dbplyr: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/statistics.scm (r-dbplyr): Update to 1.2.2.
2018-09-05gnu: r-yaml: Update to 2.2.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-yaml): Update to 2.2.0.
2018-09-05gnu: r-evaluate: Update to 0.11.Ricardo Wurmus
* gnu/packages/statistics.scm (r-evaluate): Update to 0.11.
2018-09-05gnu: r-scales: Update to 1.0.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-scales): Update to 1.0.0. [propagated-inputs]: Remove r-dichromat and r-plyr.
2018-09-05gnu: r-stringi: Update to 1.2.4.Ricardo Wurmus
* gnu/packages/statistics.scm (r-stringi): Update to 1.2.4.
2018-09-05gnu: Add r-pkgload.Ricardo Wurmus
* gnu/packages/cran.scm (r-pkgload): New variable.
2018-09-05gnu: Add r-pkgbuild.Ricardo Wurmus
* gnu/packages/cran.scm (r-pkgbuild): New variable.
2018-09-05gnu: r-httpuv: Update to 1.4.5.Ricardo Wurmus
* gnu/packages/web.scm (r-httpuv): Update to 1.4.5. [native-inputs]: Add pkg-config.
2018-09-05gnu: r-scran: Update to 1.8.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.8.4.
2018-09-05gnu: r-scater: Update to 1.8.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.8.4.
2018-09-05gnu: r-hdf5array: Update to 1.8.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.8.1.
2018-09-05gnu: r-ggbio: Update to 1.28.5.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.28.5. [propagated-inputs]: Add r-rlang.
2018-09-05gnu: r-biovizbase: Update to 1.28.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.28.2. [propagated-inputs]: Add r-rlang.
2018-09-05gnu: r-keggrest: Update to 1.20.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.20.1.
2018-09-05gnu: r-edaseq: Update to 2.14.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.14.1.
2018-09-05gnu: r-igraph: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/graph.scm (r-igraph): Update to 1.2.2.
2018-09-05gnu: r-diffusionmap: Update to 1.1-0.1.Ricardo Wurmus
* gnu/packages/graph.scm (r-diffusionmap): Update to 1.1-0.1.
2018-09-05gnu: r-seurat: Update to 2.3.4.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seurat): Update to 2.3.4. [source]: Remove snippet. [arguments]: Remove. [native-inputs]: Remove. [propagated-inputs]: Remove r-caret, r-diffusionmap, r-fnn, r-gdata, r-ranger, r-stringr, r-tclust, and rvgam; add r-httr.
2018-09-05gnu: r-msnbase: Update to 2.6.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.6.3.
2018-09-05gnu: r-maldiquant: Update to 1.18.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-maldiquant): Update to 1.18.
2018-09-05gnu: r-seqminer: Update to 6.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-seqminer): Update to 6.1.
2018-09-05gnu: r-genomicfeatures: Update to 1.32.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicfeatures): Update to 1.32.2.
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