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2020-09-14gnu: kde: kdenlive: Make breeze theme available at runtime.Prafulla Giri
* gnu/packages/kde.scm (kdenlive): [inputs]: Add breeze. [arguments]: In wrap-program phase, add XDG_DATA_DIRS to include the 'share' sub-directory of the package breeze. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-09-14gnu: Add ripmime.Sébastien Lerique
* gnu/packages/mail.scm (ripmime): New variable. Signed-off-by: Ludovic Courtès <ludo@gnu.org>
2020-09-14gnu: guix: Update to 846403e.Ludovic Courtès
* gnu/packages/package-management.scm (guix): Update to 846403e.
2020-09-14services: docker: Fix service definition.Efraim Flashner
This is a follow-up to 8422a67dc16af4dd5eb82180463aa7a0b362d5b9. * gnu/services/docker.scm (docker-service-type): Use a composed list for packages in profile-service-type.
2020-09-14gnu: maven-compiler-plugin: Don't use unstable tarball.Efraim Flashner
* gnu/packages/maven.scm (maven-compiler-plugin)[source]: Download using git-fetch.
2020-09-14gnu: maven-resources-plugin: Don't use unstable tarball.Efraim Flashner
* gnu/packages/maven.scm (maven-resources-plugin)[source]: Download using git-fetch.
2020-09-14gnu: maven-jar-plugin: Don't use unstable tarball.Efraim Flashner
* gnu/packages/maven.scm (maven-jar-plugin)[source]: Download using git-fetch.
2020-09-14gnu: java-hdrhistogram: Don't use unstable tarball.Efraim Flashner
* gnu/packages/java.scm (java-hdrhistogram)[source]: Download using git-fetch. [arguments]: Add phase to make source writable.
2020-09-14gnu: r-wgcna: Move to (gnu packages bioconductor).Ricardo Wurmus
This is a follow-up to commit 6e0ab26f31cd2bb7e5d88719d3d458df68c1963e. * gnu/packages/cran.scm (r-wgcna): Move from here... * gnu/packages/bioconductor.scm (r-wgcna): ...to here.
2020-09-14gnu: r-fithic: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-fithic): Move from here... * gnu/packages/bioconductor.scm (r-fithic): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-hitc: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-hitc): Move from here... * gnu/packages/bioconductor.scm (r-hitc): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-hdf5array: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-hdf5array): Move from here... * gnu/packages/bioconductor.scm (r-hdf5array): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-rhdf5lib: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Move from here... * gnu/packages/bioconductor.scm (r-rhdf5lib): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-beachmat: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-beachmat): Move from here... * gnu/packages/bioconductor.scm (r-beachmat): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-singlecellexperiment: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Move from here... * gnu/packages/bioconductor.scm (r-singlecellexperiment): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-scater: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-scater): Move from here... * gnu/packages/bioconductor.scm (r-scater): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-scran: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-scran): Move from here... * gnu/packages/bioconductor.scm (r-scran): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-delayedmatrixstats: Move to (gnu packages bioconductor).zimoun
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Move from here... * gnu/packages/bioconductor.scm (r-delayedmatrixstats): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-rgraphviz: Move to (gnu packages bioconductor).zimoun
* gnu/packages/graph.scm (r-rgraphviz): Move from here... * gnu/packages/bioconductor.scm (r-rgraphviz): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-preprocesscore: Move to (gnu packages bioconductor).zimoun
* gnu/packages/statistics.scm (r-preprocesscore): Move from here... * gnu/packages/bioconductor.scm (r-preprocesscore): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-fourcseq: Move to (gnu packages bioconductor).zimoun
* gnu/packages/cran.scm (r-fourcseq): Move from here... * gnu/packages/bioconductor.scm (r-fourcseq): ...to here. Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2020-09-14gnu: r-rgraphviz: Build reproducibly.Ricardo Wurmus
Fixes <https://bugs.gnu.org/43398>. * gnu/packages/graph.scm (r-rgraphviz)[arguments]: Add phase "make-reproducible".
2020-09-14gnu: r-quantreg: Update to 5.67.Ricardo Wurmus
* gnu/packages/statistics.scm (r-quantreg): Update to 5.67.
2020-09-14gnu: r-cowplot: Update to 1.1.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-cowplot): Update to 1.1.0. [native-inputs]: Add r-knitr.
2020-09-14gnu: r-rcpparmadillo: Update to 0.9.900.3.0.Ricardo Wurmus
* gnu/packages/statistics.scm (r-rcpparmadillo): Update to 0.9.900.3.0.
2020-09-14gnu: r-ggdendro: Update to 0.1.22.Ricardo Wurmus
* gnu/packages/statistics.scm (r-ggdendro): Update to 0.1.22.
2020-09-14gnu: r-stringi: Update to 1.5.3.Ricardo Wurmus
* gnu/packages/statistics.scm (r-stringi): Update to 1.5.3.
2020-09-14gnu: r-mass: Update to 7.3-53.Ricardo Wurmus
* gnu/packages/statistics.scm (r-mass): Update to 7.3-53.
2020-09-14gnu: r-diversitree: Update to 0.9-14.Ricardo Wurmus
* gnu/packages/cran.scm (r-diversitree): Update to 0.9-14.
2020-09-14gnu: r-seurat: Update to 3.2.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-seurat): Update to 3.2.1. [propagated-inputs]: Remove r-ape; add r-matrixstats.
2020-09-14gnu: r-rfast: Update to 2.0.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-rfast): Update to 2.0.1.
2020-09-14gnu: r-scatterpie: Update to 0.1.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-scatterpie): Update to 0.1.5.
2020-09-14gnu: r-forecast: Update to 8.13.Ricardo Wurmus
* gnu/packages/cran.scm (r-forecast): Update to 8.13.
2020-09-14gnu: r-gamlss: Update to 5.2-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-gamlss): Update to 5.2-0.
2020-09-14gnu: r-parameters: Update to 0.8.5.Ricardo Wurmus
* gnu/packages/cran.scm (r-parameters): Update to 0.8.5.
2020-09-14gnu: r-systemfonts: Update to 0.3.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-systemfonts): Update to 0.3.1.
2020-09-14gnu: r-dalex: Update to 2.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-dalex): Update to 2.0.
2020-09-14gnu: r-sf: Update to 0.9-6.Ricardo Wurmus
* gnu/packages/cran.scm (r-sf): Update to 0.9-6.
2020-09-14gnu: r-deldir: Update to 0.1-29.Ricardo Wurmus
* gnu/packages/cran.scm (r-deldir): Update to 0.1-29.
2020-09-14gnu: r-shinyjs: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-shinyjs): Update to 2.0.0. [native-inputs]: Add r-knitr.
2020-09-14gnu: r-etm: Update to 1.1.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-etm): Update to 1.1.1.
2020-09-14gnu: r-fields: Update to 11.4.Ricardo Wurmus
* gnu/packages/cran.scm (r-fields): Update to 11.4.
2020-09-14gnu: r-rnifti: Update to 1.2.2.Ricardo Wurmus
* gnu/packages/cran.scm (r-rnifti): Update to 1.2.2.
2020-09-14gnu: r-misc3d: Update to 0.9-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-misc3d): Update to 0.9-0.
2020-09-14gnu: r-rcpphnsw: Update to 0.3.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-rcpphnsw): Update to 0.3.0.
2020-09-14gnu: r-ggeffects: Update to 0.16.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggeffects): Update to 0.16.0.
2020-09-14gnu: r-performance: Update to 0.5.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-performance): Update to 0.5.0.
2020-09-14gnu: r-mosaicdata: Update to 0.20.1.Ricardo Wurmus
* gnu/packages/cran.scm (r-mosaicdata): Update to 0.20.1.
2020-09-14gnu: r-mosaiccore: Update to 0.8.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-mosaiccore): Update to 0.8.0. [propagated-inputs]: Remove r-lazyeval.
2020-09-14gnu: r-flextable: Update to 0.5.11.Ricardo Wurmus
* gnu/packages/cran.scm (r-flextable): Update to 0.5.11.
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