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2024-01-01gnu: r-ggvenndiagram: Update to 1.4.9.Ricardo Wurmus
* gnu/packages/cran.scm (r-ggvenndiagram): Update to 1.4.9. [propagated-inputs]: Add r-aplot, r-forcats, and r-tidyr; remove r-magrittr, r-plotly, r-purrr, r-rvenn, r-sf, and r-yulab-utils. Change-Id: I7e1f701e893aff8d75fa9de46d4f451cfa98f820
2024-01-01gnu: r-diversitree: Update to 0.10-0.Ricardo Wurmus
* gnu/packages/cran.scm (r-diversitree): Update to 0.10-0. [native-inputs]: Remove gfortran. Change-Id: Ie54ba8374d85b66d712d2c50d7ad1f05edc01b75
2024-01-01gnu: r-radiant-data: Update to 1.6.3.Ricardo Wurmus
* gnu/packages/cran.scm (r-radiant-data): Update to 1.6.3. [source]: Do not delete help files, because they are now under CC-BY-SA. [arguments]: Simplify by using minify-build-system. Change-Id: Ic4a2bdd3a8df9f27d703505eaeba080e28982c80
2024-01-01gnu: r-shiny: Update to 1.8.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-shiny): Update to 1.8.0. [arguments]: Do not use quasiquote for argument list. Change-Id: Id36b3168a13a254e26cda30d7eaa45874d40c4e3
2024-01-01gnu: r-torch: Update to 0.12.0.Ricardo Wurmus
* gnu/packages/cran.scm (r-torch): Update to 0.12.0. [propagated-inputs]: Add r-jsonlite and r-safetensors. Change-Id: I7d35b494640159975485846416e03630c7cd451f
2024-01-01gnu: liblantern: Update to 0.11.0-1.4d83bd0.Ricardo Wurmus
* gnu/packages/machine-learning.scm (liblantern): Update to 0.11.0-1.4d83bd0. Change-Id: I04ac3d64df8ec3b4ba628886640020a24361f4e3
2024-01-01gnu: python-pytorch-for-r-torch: Update to 2.0.1.Ricardo Wurmus
* gnu/packages/machine-learning.scm (python-pytorch-for-r-torch): Update to 2.0.1. * gnu/packages/patches/python-pytorch2-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I97551d543e50f6e511aa0529c097d156cf3f96de
2024-01-01gnu: Add onnx-optimizer-for-torch2.Ricardo Wurmus
* gnu/packages/machine-learning.scm (onnx-optimizer-for-torch2): New variable. Change-Id: Icf48cba3f0a30f171b6f01cd033dd135a078ba1a
2024-01-01gnu: Add onnx-for-torch2.Ricardo Wurmus
* gnu/packages/machine-learning.scm (onnx-for-torch2): New variable. * gnu/packages/patches/onnx-1.13.1-use-system-googletest.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I8a46b9a8096a33bcf949bc4f5d497e22902ab301
2024-01-01gnu: python-protobuf: Update to 3.20.2.Ricardo Wurmus
* gnu/packages/protobuf.scm (python-protobuf): Update to 3.20.2. Change-Id: Ic7a0f199f522ebf1e62e9179b4a7e4223594299c
2024-01-01gnu: Add r-safetensors.Ricardo Wurmus
* gnu/packages/cran.scm (r-safetensors): New variable. Change-Id: I40bcee87cdbba9776f3448a2567f94ebb1e652b9
2024-01-01gnu: Add xnnpack-for-torch2.Ricardo Wurmus
* gnu/packages/machine-learning.scm (xnnpack-for-torch2): New variable. * gnu/packages/patches/xnnpack-for-torch2-system-libraries.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it. Change-Id: I1c35f5fbd064fcc6732b924d7cafaa1a7d03ce04
2024-01-01gnu: r-rmpi: Update to 0.7-2.Ricardo Wurmus
* gnu/packages/cran.scm (r-rmpi): Update to 0.7-2. [properties]: Specify updater-extra-inputs. [arguments]: Use G-expression. Change-Id: Ic15015bf181ae1e7689b7c81a3bf11258e2df946
2024-01-01gnu: r-littler: Update to 0.3.19.Ricardo Wurmus
* gnu/packages/cran.scm (r-littler): Update to 0.3.19. [properties]: Specify updater-extra-inputs. [native-inputs]: Remove pkg-config. Change-Id: Ic152e560fa9f5609aebc8c4a68a60265b7626bcb
2024-01-01gnu. josm. Update to 18907.Julien Lepiller
* gnu/packages/geo.scm (josm): Update to 18907. Change-Id: Ica61eabb49489bc5716b2b0bd029bbffcb7f84d3
2024-01-01gnu: Add java-jakarta-annotations-api.Julien Lepiller
* gnu/packages/java.scm (java-jakarta-annotations-api): New variable. Change-Id: I374d1be6f1c509c9c6391e0551de5362eae13357
2024-01-01gnu: Add neovim-coqtail.Jean-Pierre De Jesus DIAZ
* gnu/packages/vim.scm (neovim-coqtail): New variable. Change-Id: I431571925da02788410fc8bf3b1e1aea93bcb1bb Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2024-01-01gnu: vim-coqtail: Allow using neovim for tests.Jean-Pierre De Jesus DIAZ
* gnu/packages/vim.scm (vim-coqtail): Allow using neovim for tests. Change-Id: I114b07dd9cf525a5571a37f51b2e6b2a57d5be46 Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2024-01-01gnu: vim-coqtail: Move vim-full to arguments.Jean-Pierre De Jesus DIAZ
* gnu/packages/vim.scm (vim-coqtail)[arguments]: Set #:vim to use vim-full. Adjust custom 'check phase accordingly. [native-inputs]: Remove vim-full. Remove input labels. Change-Id: I20cc1e0772727f8fc7db70b42151432fb6349fc7 Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2024-01-01gnu: Add neovim-vader.Jean-Pierre De Jesus DIAZ
* gnu/packages/vim.scm (neovim-vader): New variable. Change-Id: Ib507c2086c31a42088f3f433b57ac1e345e27113 Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2024-01-01gnu: vim-vader: Allow using neovim for tests.Jean-Pierre De Jesus DIAZ
* gnu/packages/vim.scm (vim-vader): Allow using neovim for tests. Change-Id: Id5b4423f24fdd42814b0a0e3fab801ec871611f7 Signed-off-by: Efraim Flashner <efraim@flashner.co.il>
2024-01-01gnu: gccgo-12: Fix building with 1 core.Efraim Flashner
* gnu/packages/gcc.scm (make-gccgo)[arguments]: When building gccgo-12 or higher add a phase to build libbacktrace before libgo. Change-Id: I9bb225b58ffa439f9461e4126f51ab453683efbe
2024-01-01nls: Update translations.Florian Pelz
Change-Id: Ib407fd37896cc8653f5bfb1f76dba9dc775c8c10
2023-12-31gnu: go-1.21: Update to 1.21.5.John Kehayias
* gnu/packages/golang.scm (go-1.21): Update to 1.21.5. Change-Id: Ie7d275e698c3884c93d7618d99859d6019fa8893
2023-12-31gnu: Add the Go standard library 1.21.John Kehayias
* gnu/packages/golang.scm (go-std-1.21): New variable. Co-authored-by: VÖRÖSKŐI András <voroskoi@gmail.com> Change-Id: I8f26611fc5a9398d915e74d3e55a0f0310b27133
2023-12-31gnu: Add go-1.21.Katherine Cox-Buday
* gnu/packages/golang.scm (go-1.21): New variable. Signed-off-by: John Kehayias <john.kehayias@protonmail.com> Change-Id: Ifa9fa61ed1ae49831621bdbabd530d29f6fa164a
2023-12-31gnu: jq: Update to 1.7.1 [security fixes].Timotej Lazar
Fixes CVE-2023-50246 and CVE-2023-50268. * gnu/packages/web.scm (jq): Update to 1.7.1. Change-Id: I21999732036c76faea711e0484fa8c0d75d8736f Signed-off-by: John Kehayias <john.kehayias@protonmail.com>
2023-12-31gnu: go-github-com-stretchr-testify-bootstrap: Move to golang-check.scmEfraim Flashner
* gnu/packages/golang.scm (go-github-com-stretchr-testify-bootstrap): Move from here ... * gnu/packages/golang-check.scm: ... to here. Change-Id: Iaa32e1c17a0e5a372613302e5e7fbf8de4d9572a
2023-12-31gnu: Remove dxvk.Kaelyn Takata
This package has been broken for some time, and upstream removed support for building with winelib in version 1.7 released in May 2020. * gnu/packages/wine.scm (dxvk): Delete variable. Change-Id: I393853aa6e0c9257907549f346a36a1fe37a61a0 Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-31gnu: wine-staging: Update to 8.18.Kaelyn Takata
* gnu/packages/wine.scm (wine-staging): Update to 8.18. (wine-staging-patchset-data)[#:builder]: Adjust accordingly. [native-inputs]: Drop bash. (wine-staging)[native-inputs]: Add python-3. [#:phases]<apply-wine-staging-patches>: Adjust path to patch script. (wine64-staging)[#:phases]<apply-wine-staging-patches>: Likewise. Change-Id: Ie71ed785c1e821b1d1752e46b3da11809b4331e5 Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-31gnu: Add devours.Adam Faiz
* gnu/packages/games.scm (devours): New variable. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-31gnu: Add informlib.Adam Faiz
* gnu/packages/game-development.scm (informlib): New variable. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-31gnu: Add inform.Adam Faiz
* gnu/packages/game-development.scm (inform): New variable. Signed-off-by: Liliana Marie Prikler <liliana.prikler@gmail.com>
2023-12-31doc: cookbook: Fix typo.Jonathan Brielmaier
Follow-up: f24b14767d362a84e6469682b4fe303b50f4b589 * doc/guix-cookbook.texi (Routed network for libvirt): Fix typo in section name. Change-Id: I1ba7ee2cba89764283f6a702a793ee9100585a87
2023-12-31gnu: Remove emacs-mu4e-conversation.Maxim Cournoyer
* gnu/packages/emacs-xyz.scm (emacs-mu4e-conversation): Delete variable. Reported-by: Cayetano Santos <csantosb@inventati.org> Change-Id: I45126ecabdfc475e5cd19a342c78e7e98e91fe54
2023-12-31doc: Use accurate wording in Emacs-Debbugs configuration.Florian Pelz
'M-x debbugs-gnu' does not prompt for which bugs to show. 'C-u M-x debbugs-gnu' would. Follow-up to 19fe24c5b978a16cbca3cddbfa3ab9d1ee2c68f2. * doc/contributing.texi (Viewing Bugs within Emacs): Make comment more accurate. Signed-off-by: Maxim Cournoyer <maxim.cournoyer@gmail.com>
2023-12-31gnu: font-lxgw-wenkai: Update to 1.315.Hilton Chain
* gnu/packages/fonts.scm (font-lxgw-wenkai): Update to 1.315. Change-Id: I28d0526af7868a50a378fcbd5bd2d11d27b02aa1 Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2023-12-31gnu: diffoscope: Update to 253.Vagrant Cascadian
* gnu/packages/diffoscope.scm (diffoscope): Update to 253. Signed-off-by: 宋文武 <iyzsong@member.fsf.org> Change-Id: I70d0130c8cc3cdea03546969a0e87eb4c637fc5b
2023-12-31gnu: shflags: Update to 1.3.0.Greg Hogan
* gnu/packages/version-control.scm (shflags): Update to 1.3.0. Change-Id: I8463a45d4a2526d971441292e7ec94c9e0710521 Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2023-12-31gnu: mympd: Update to 13.0.6.Bruno Victal
* gnu/packages/mpd.scm (mympd): Update to 13.0.6. Signed-off-by: 宋文武 <iyzsong@member.fsf.org> Change-Id: Iaaf3985ce4c1399bb0709f2e6702df2a232a1e48
2023-12-31gnu: glfw: Update to 3.3.9.Kaelyn Takata
* gnu/packages/gl.scm (glfw): Update to 3.3.9. Change-Id: Ide5ec168e97d431dba007bd6095635dab83b87c4 Signed-off-by: 宋文武 <iyzsong@member.fsf.org>
2023-12-30gnu: Remove ocaml-markup0.8.0.Julien Lepiller
This is only used for ocaml4.07. * gnu/packages/ocaml.scm (ocaml-markup0.8.0): Remove variable. (ocaml-markup)[properties]: Remove variant. Change-Id: Ib6444d67f5b8fba13e8ca7bca444ed9e29efa7de
2023-12-30gnu: Remove ocaml4.07-sexplib0.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml4.07-sexplib0): Remove variable. (ocaml-sexplib0)[properties]: Remove variant. Change-Id: Ie370668adc446fc4c2b04206a6657380e5e09790
2023-12-30gnu: Remove ocaml4.07-lwt.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml4.07-lwt): Remove variable. (ocaml-lwt)[properties]: Remove variant. Change-Id: I3db8b1656ead127a9081d843a3ad387706bcc982
2023-12-30gnu: Remove ocaml4.07-base.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml4.07-base): Remove variable. (ocaml-base)[properties]: Remove variant. Change-Id: I07813a2865b3bb42e0adf75e74bfebe372f1e789
2023-12-30gnu: Remove ocaml4.07-stdio.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml4.07-stdio): Remove variable. (ocaml-stdio)[properties]: Remove variant. Change-Id: I5a664b5130408eba41266f36cfc03641e2a8fd9d
2023-12-30gnu: Remove ocaml4.07-re.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml4.07-re): Remove variable. (ocaml-re)[properties]: Remove variant. Change-Id: Ib3cf5188737579908e945bd49617b6d717da4250
2023-12-30gnu: Remove ocaml4.07-compiler-libs.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml4.07-compiler-libs): Remove variable. (ocaml-compiler-libs)[properties]: Remove variant. Change-Id: Idf54330537c2ff9317a4650df06ece7bd980b1da
2023-12-30gnu: Remove ocaml4.07-cmdliner.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml4.07-cmdliner): Remove variable. (ocaml-cmdliner)[properties]: Remove variant. Change-Id: I83cd2ca87356a103201b3c1ffb1a8de4b081a9da
2023-12-30gnu: Remove ocaml4.07-lablgtk.Julien Lepiller
* gnu/packages/ocaml.scm (ocaml4.07-lablgtk): Remove variable. (lablgtk)[properties]: Remove variant. Change-Id: I931b9316834d109fe291dbb8d1217690e129b9ee
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