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path: root/gnu/packages/backup.scm
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2017-10-10Merge branch 'staging'Marius Bakke
2017-10-08gnu: borg: Update to 1.1.0.Leo Famulari
* gnu/packages/backup.scm (borg): Update to 1.1.0. [native-inputs]: Replace python-sphinx-rtd-theme with python-guzzle-sphinx-theme.
2017-10-08gnu: par2cmdline: Update to 0.7.4.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (par2cmdline): Update to 0.7.4.
2017-09-20gnu: Use 'modify-phases' syntax.Kei Kebreau
* gnu/packages/admin.scm (mingetty, clusterssh, wpa-supplicant-minimal, wpa-supplicant, wakelan, acpica, tree, direvent, dstat)[arguments]: Use 'modify-phases' syntax. * gnu/packages/algebra.scm (arb)[arguments]: Likewise. * gnu/packages/apr.scm (apr-util)[arguments]: Likewise. * gnu/packages/audio.scm (clalsadrv, fluidsynth, faad2, lv2-mda-piano, lv2-mda-epiano, timidity++, vamp, soundtouch, portaudio, rsound, zita-convolver, zita-alsa-pcmi)[arguments]: Likewise. * gnu/packages/backup.scm (rdup, btar)[arguments]: Likewise. * gnu/packages/bioinformatics.scm (bedops, bwa, crossmap, express, flexbar, grit, hisat, ngs-sdk, subread)[arguments]: Likewise. * gnu/packages/bittorrent.scm (transmission)[arguments]: Likewise. * gnu/packages/cdrom.scm (cd-discid)[arguments]: Likewise. * gnu/packages/compression.scm (sharutils)[arguments]: Likewise. * gnu/packages/conky.scm (conky)[arguments]: Likewise. * gnu/packages/databases.scm (bdb, bdb-5.3)[arguments]: Likewise. * gnu/packages/debug.scm (delta, c-reduce)[arguments]: Likewise. * gnu/packages/display-managers.scm (slim)[arguments]: Likewise. * gnu/packages/dns.scm (dnsmasq)[arguments]: Likewise. * gnu/packages/emacs.scm (geiser, emacs-wget, bbdb)[arguments]: Likewise. * gnu/packages/engineering.scm (pcb)[arguments]: Likewise. * gnu/packages/firmware.scm (ath9k-htc-firmware)[arguments]: Likewise. * gnu/packages/flashing-tools.scm (flashrom)[arguments]: Likewise. * gnu/packages/fltk.scm (fltk)[arguments]: Likewise. * gnu/packages/freedesktop.scm (python-pyxdg)[arguments]: Likewise. * gnu/packages/gd.scm (perl-gd)[arguments]: Likewise. * gnu/packages/gkrellm.scm (gkrellm)[arguments]: Likewise. * gnu/packages/glib.scm (glibmm)[arguments]: Likewise. * gnu/packages/gl.scm (glew)[arguments]: Likewise. * gnu/packages/gnome.scm (icon-naming-utils, orbit2, libbonobo, gnome-vfs, libgnome, libbonoboui, goffice-0.8, dconf)[arguments]: Likewise. * gnu/packages/gprolog.scm (gprolog)[arguments]: Likewise. * gnu/packages/gps.scm (gpscorrelate)[arguments]: Likewise. * gnu/packages/graphics.scm (agg)[arguments]: Likewise. * gnu/packages/gtk.scm (ganv, girara, gtksourceview-2, guile-present, python2-pycairo)[arguments]: Likewise. * gnu/packages/guile.scm (guile-1.8)[arguments]: Likewise. * gnu/packages/guile-wm.scm (guile-wm)[arguments]: Likewise. * gnu/packages/hugs.scm (hugs)[arguments]: Likewise. * gnu/packages/hurd.scm (gnumach-headers, hurd-headers, hurd-minimal) [arguments]: Likewise. * gnu/packages/image-viewers.scm (feh, sxiv)[arguments]: Likewise. * gnu/packages/libcanberra.scm (libcanberra)[arguments]: Likewise. * gnu/packages/linux.scm (bridge-utils, iw, fuse, unionfs-fuse/static, lm-sensors, i2c-tools, xsensors, perf, mdadm, libaio, module-init-tools) [arguments]: Likewise. * gnu/packages/lisp.scm (ccl)[arguments]: Likewise. * gnu/packages/lout.scm (lout)[arguments]: Likewise. * gnu/packages/lua.scm (luajit)[arguments]: Likewise. * gnu/packages/machine-learning.scm (shogun)[arguments]: Likewise. * gnu/packages/mail.scm (exim)[arguments]: Likewise. * gnu/packages/man.scm (man-pages, txt2man)[arguments]: Likewise. * gnu/packages/maths.scm (lapack, superlu-dist, openlibm, openspecfun) [arguments]: Likewise. * gnu/packages/messaging.scm (bitlbee)[arguments]: Likewise. * gnu/packages/mp3.scm (libmad, id3lib, mp3info)[arguments]: Likewise. * gnu/packages/music.scm (solfege)[arguments]: Likewise. * gnu/packages/noweb.scm (noweb)[arguments]: Likewise. * gnu/packages/patchutils.scm (patchutils, quilt, colordiff)[arguments]: Likewise. * gnu/packages/pdf.scm (xpdf, zathura-cb, zathura-ps, zathura-djvu, zathura-pdf-poppler, zathura, podofo, fbida)[arguments]: Likewise. * gnu/packages/perl.scm (perl-file-list, perl-test-harness)[arguments]: Likewise. * gnu/packages/photo.scm (gphoto2)[arguments]: Likewise. * gnu/packages/popt.scm (popt)[arguments]: Likewise. * gnu/packages/pretty-print.scm (source-highlight, astyle)[arguments]: Likewise. * gnu/packages/pumpio.scm (pumpa)[arguments]: Likewise. * gnu/packages/python.scm (python-passlib, python-pycrypto, python2-empy, python-sqlalchemy, python-docopt)[arguments]: Likewise. * gnu/packages/rdf.scm (lrdf)[arguments]: Likewise. * gnu/packages/regex.scm (tre)[arguments]: Likewise. * gnu/packages/rrdtool.scm (rrdtool)[arguments]: Likewise. * gnu/packages/ruby.scm (ruby-2.1, ruby-1.8)[arguments]: Likewise. * gnu/packages/sawfish.scm (sawfish)[arguments]: Likewise. * gnu/packages/scheme.scm (racket)[arguments]: Likewise. * gnu/packages/sdl.scm (guile-sdl)[arguments]: Likewise. * gnu/packages/serveez.scm (serveez)[arguments]: Likewise. * gnu/packages/skribilo.scm (skribilo)[arguments]: Likewise. * gnu/packages/smalltalk.scm (smalltalk)[arguments]: Likewise. * gnu/packages/suckless.scm (dmenu, slock)[arguments]: Likewise. * gnu/packages/tcl.scm (expect)[arguments]: Likewise. * gnu/packages/telephony.scm (commoncpp)[arguments]: Likewise. * gnu/packages/textutils.scm (recode, libgtextutils)[arguments]: Likewise. * gnu/packages/time.scm (time)[arguments]: Likewise. * gnu/packages/tor.scm (privoxy)[arguments]: Likewise. * gnu/packages/uucp.scm (uucp)[arguments]: Likewise. * gnu/packages/video.scm (libdvdnav-4)[arguments]: Likewise. * gnu/packages/web-browsers.scm (lynx)[arguments]: Likewise. * gnu/packages/web.scm (tinyproxy)[arguments]: Likewise. * gnu/packages/wicd.scm (wicd)[arguments]: Likewise. * gnu/packages/wm.scm (bspwm)[arguments]: Likewise. * gnu/packages/xdisorg.scm (sxhkd, xcape)[arguments]: Likewise. * gnu/packages/xfce.scm (xfconf)[arguments]: Likewise. * gnu/packages/xfig.scm (transfig)[arguments]: Likewise. * gnu/packages/xorg.scm (imake)[arguments]: Likewise.
2017-09-07gnu: libarchive: Replace with libarchive 3.3.2 and fix CVE-2017-14166.Leo Famulari
* gnu/packages/backup.scm (libarchive)[replacement]: New field. (libarchive-3.3.2): New variable. * gnu/packages/patches/libarchive-CVE-2017-14166.patch: New file. * gnu/local.mk (dist_patch_DATA): Add it.
2017-08-29Update e-mail for Kei Kebreau.Kei Kebreau
* .mailmap: Map kei@openmailbox.org to current address. * gnu/local.mk: Replace kei@openmailbox.org to current address. * gnu/packages/backup.scm: Likewise. * gnu/packages/calendar.scm: Likewise. * gnu/packages/check.scm: Likewise. * gnu/packages/compression.scm: Likewise. * gnu/packages/documentation.scm: Likewise. * gnu/packages/emacs.scm: Likewise. * gnu/packages/fltk.scm: Likewise. * gnu/packages/freedesktop.scm: Likewise. * gnu/packages/game-development.scm: Likewise. * gnu/packages/games.scm: Likewise. * gnu/packages/gnome.scm: Likewise. * gnu/packages/gnustep.scm: Likewise. * gnu/packages/gtk.scm: Likewise. * gnu/packages/hexedit.scm: Likewise. * gnu/packages/image.scm: Likewise. * gnu/packages/maths.scm: Likewise. * gnu/packages/music.scm: Likewise. * gnu/packages/xfce.scm: Likewise. * gnu/packages/python.scm: Likewise. * gnu/packages/tcl.scm: Likewise. * gnu/packages/textutils.scm: Likewise. * gnu/packages/video.scm: Likewise. * gnu/packages/w3m.scm: Likewise. * gnu/packages/web.scm: Likewise. * gnu/packages/web-browsers.scm: Likewise. * gnu/packages/patches/wmfire-update-for-new-gdk-versions.patch: Likewise.
2017-08-07Merge branch 'master' into core-updatesMark H Weaver
2017-08-07gnu: wimlib: Update to 1.12.0.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (wimlib): Update to 1.12.0.
2017-07-23Merge branch 'master' into core-updatesLeo Famulari
2017-07-21gnu: borg: Update to 1.0.11.Leo Famulari
* gnu/packages/backup.scm (borg): Update to 1.0.11.
2017-07-16gnu: par2cmdline: Fix typo.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (par2cmdline)[description]: Fix typo only visible on white backgrounds. Use less ambiguous word.
2017-07-16gnu: par2cmdline: Improve synopsis & description.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (par2cmdline)[synopsis, description]: Fix a typo, end up re-writing most of it.
2017-07-16gnu: par2cmdline: Update to 0.7.3.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (par2cmdline): Update to 0.7.3.
2017-06-18Merge branch 'master' into core-updatesMark H Weaver
2017-06-16Revert "gnu: borg: Update to 1.1.0b5."Tobias Geerinckx-Rice
This reverts commit 0b2ff24f9c3e3f689095753a21047c723dd6ca40, which leaked my local testing version.
2017-06-16gnu: borg: Update to 1.1.0b5.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (borg): Update to 1.1.0b5.
2017-06-16gnu: par2cmdline: Update to 0.7.2.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (par2cmdline): Update to 0.7.2.
2017-06-03Merge branch 'master' into core-updatesMarius Bakke
Conflicts: gnu/packages/image.scm (incorporated libtiff graft)
2017-06-01gnu: par2cmdline: Update to 0.7.1.Brendan Tildesley
* gnu/packages/backup.scm (par2cmdline): Update to 0.7.1. [arguments]: Parallel tests work now; reenable them. Signed-off-by: Arun Isaac <arunisaac@systemreboot.net>
2017-05-24Merge branch 'master' into core-updatesRicardo Wurmus
2017-05-14gnu: par2cmdline: Update to 0.7.0Brendan Tildesley
* gnu/packages/backup.scm (par2cmdline): Update to 0.7.0 [source]: Remove old test fix incorporated upstream. [arguments]: Disable parallel tests. Signed-off-by: Leo Famulari <leo@famulari.name>
2017-05-08gnu: libarchive: Replace with 3.3.1 [security fixes].Kei Kebreau
Fixes CVE-2016-{10209,10350} and CVE-2017-5601. * gnu/packages/backup.scm (libarchive)[replacement]: New field. (libarchive-3.3.1): New variable.
2017-04-25gnu: duplicity: Update to 0.7.12.Thomas Danckaert
* gnu/packages/backup.scm (duplicity): Update to 0.7.12.
2017-04-08gnu: libarchive: Update to 3.3.1.Leo Famulari
* gnu/packages/backup.scm (libarchive): Update to 3.3.1.
2017-03-30Merge branch 'master' into core-updatesMarius Bakke
Most conflicts are from 6fd52309b8f52c9bb59fccffac53e029ce94b698.
2017-03-28gnu: python-pytest-2.9.2: Replace with python-pytest-3.0.Leo Famulari
* gnu/packages/python.scm (python-pytest-2.9.2): Replace with ... (python-pytest-3.0): ... new variable. (python2-pytest-3.0): New variable. (python-cryptography, python2-cryptography, python-sphinx-1.5.3)[native-inputs]: Replace python-pytest-2.9.2 with python-pytest-3.0. * gnu/packages/backup.scm (borg)[native-inputs]: Likewise. gnu/packages/calendar.scm (khal)[native-inputs]: Likewise.
2017-03-22Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner
2017-03-20gnu: obnam: Enable tests.Arun Isaac
* gnu/packages/backup.scm (obnam)[arguments]: Replace 'check' phase with custom function. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-03-13Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner
2017-03-10gnu: Add obnam.Arun Isaac
* gnu/packages/backup.scm (obnam): New variable. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-03-09Merge branch 'master' into core-updatesLudovic Courtès
2017-03-09gnu: Add rsnapshot.Thomas Danckaert
* gnu/packages/backup.scm (rsnapshot): New variable.
2017-03-08gnu: Remove unneeded imports.Ludovic Courtès
* gnu/packages/backup.scm: Remove unneeded (guix build utils) import. * gnu/packages/finance.scm: Likewise.
2017-02-27Merge branch 'master' into python-testsMarius Bakke
2017-02-20Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner
2017-02-19gnu: duplicity: Fix tests.Marius Bakke
* gnu/packages/backup.scm (duplicity)[native-inputs]: Add PAR2CMDLINE. [arguments]: Move /bin/sh substitution to 'patch-source' phase and add one file.
2017-02-14gnu: borg: Update to 1.0.10.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (borg): Update to 1.0.10.
2017-01-23Merge branch 'master' into core-updatesLudovic Courtès
2017-01-23gnu: duplicity: Update to 0.7.11.Thomas Danckaert
* gnu/packages/backup.scm (duplicity): Update to 0.7.11. [source]: Remove patches. [inputs]: Add lftp, update gnupg, remove python-2, make python2-lockfile a propagated input, make python2-mock a native-input. [propagated-inputs]: Add python2-lockfile, python2-urllib3. [native-inputs]: Add python2-pexpect, python2-mock. [arguments]: Add build phase to embed gnupg store name. * gnu/packages/patches/duplicity-piped-password.patch: Delete it. * gnu/packages/patches/duplicity-test_selection-tmp.patch: Delete it. * gnu/local.mk (dist_patch_DATA): Remove patches. Signed-off-by: Marius Bakke <mbakke@fastmail.com>
2017-01-06Merge branch 'master' into core-updatesLeo Famulari
2017-01-04gnu: Add wimlib.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (wimlib): New variable.
2016-12-20gnu: borg: Update to 1.0.9.Leo Famulari
* gnu/packages/backup.scm (borg): Update to 1.0.9. [arguments]: Run the check phase in its own directory. Skip the test 'test_get_security_dir'.
2016-12-13gnu: duplicity: Use 'modify-phases' syntax.Marius Bakke
* gnu/packages/backup.scm (duplicity)[arguments]: Use 'modify-phases'.
2016-11-30gnu: borg: Fix the test suite.Leo Famulari
* gnu/packages/backup.scm (borg)[arguments]: Use add-installed-pythonpath and disable tests related to FUSE.
2016-11-28gnu: libarchive: Update to 3.2.2.Leo Famulari
* gnu/packages/backup.scm (libarchive): Update to 3.2.2. [source]: Remove obsolete patches. * gnu/packages/patches/libarchive-7zip-heap-overflow.patch, gnu/packages/patches/libarchive-fix-filesystem-attacks.patch, gnu/packages/patches/libarchive-fix-symlink-check.patch, gnu/packages/patches/libarchive-safe_fprintf-buffer-overflow.patch: Delete files. * gnu/local.mk (dist_patch_DATA): Remove them.
2016-11-15gnu: Remove python-setuptools and python2-setuptools from inputs (part 2)Hartmut Goebel
This patch contains the changes where removing setuptools from the inputs affected some code-lines beside. * gnu/packages/admin.scm (ansible): Remove all [inputs], [native-inputs] and [propagated-inputs] where python-setuptools or python2-setuptools are the sole entries. Remove python-setuptools and python2-setuptools listed on a line by its own from [inputs], [native-inputs] and [propagated-inputs]. * gnu/packages/backup.scm (duplicity): Likewise. * gnu/packages/bioinformatics.scm (bamm, python2-pybedtools, python2-bx-python, python2-dendropy, python-pysam, python2-pysam, clipper, crossmap, cutadapt, deeptools, grit, idr, python2-warpedlmm, pbtranscript-tofu, seqmagick): Likewise. * gnu/packages/docbook.scm (dblatex): Likewise. * gnu/packages/freedesktop.scm (python-pyxdg, python2-pyxdg): Likewise. * gnu/packages/lirc.scm (python2-lirc): Likewise. * gnu/packages/mp3.scm (eyed3): Likewise. * gnu/packages/nutrition.scm (gourmet): Likewise. * gnu/packages/openstack.scm (python-hacking, python2-hacking, python-os-testr, python2-os-testr, python-stevedore, python2-stevedore, python-tempest-lib, python2-tempest-lib, python-oslo.log, python2-oslo.log, python-keystoneclient, python2-keystoneclient): Likewise. * gnu/packages/password-utils.scm (assword): Likewise. * gnu/packages/python.scm (python-passlib, python2-passlib, python-babel, python2-babel, python-parse-type, python-pytest, python2-pytest, python-scripttest, python2-scripttest, python-testtools, python2-testtools, python-testscenarios, python2-testscenarios, python-subunit, python2-subunit, python-pbr-0.11, python-pbr, python2-pbr, python-testrepository, python2-testrepository, behave, python-wheel, python2-wheel, python-requests, python2-requests, python-jsonschema, python2-jsonschema, python-pyjwt, python2-pyjwt, python-virtualenv, python2-virtualenv, python-jinja2, python2-jinja2, python-joblib, python2-joblib, python-sphinx, python2-sphinx, python-feedgenerator, python2-feedgenerator, python-scikit-image, python2-scikit-image, python-redis, python2-redis, python2-fastlmm, python-numpydoc, python2-numpydoc, python-matplotlib, python2-matplotlib, python2-pysnptools, python-rpy2, python2-rpy2, python-pillow, python2-pillow, python-pycparser, python2-pycparser, python-cffi, python2-cffi, python-cairocffi, python2-cairocffi, python-drmaa, python2-drmaa, python-pathpy, python2-pathpy, python-simplegeneric, python2-simplegeneric, python-ipython, python2-ipython, python-apsw, python2-apsw, python-lxml, python2-lxml, python-networkx, python2-networkx, python-pyzmq, python2-pyzmq, python-mccabe, python2-mccabe, python-mccabe-0.2.1, python-flake8, python2-flake8, python-flake8-2.2.4, python-mistune, python2-mistune, python-ptyprocess, python2-ptyprocess, python-llfuse, python2-llfuse, python-webob, python2-webob, python-xlrd, python2-xlrd, python-tables, python2-tables, python-pip, python2-pip, python-libarchive-c, python2-libarchive-c, python-docopt, python2-docopt, python-pyrfc3339, python2-pyrfc3339, python-configobj, python2-configobj, python-clint, python2-clint, python-rply, python2-rply, python2-rpython, python-widgetsnbextension, python2-widgetsnbextension jupyter, python-jupyter-console, python2-jupyter-console, python-hy, python2-hy, python-urllib3, python2-urllib3, python-rsa, python2-rsa, python-tox, python2-tox, python2-hypothesis, python-paste, python2-paste, python-pastescript, python2-pastescript, python2-unicodecsv, python-pkgconfig, python2-pkgconfig, python2-rope, python-sqlparse, python2-sqlparse, python-gevent, python2-gevent, python-tabulate, python2-tabulate, python-arrow, python2-arrow, python-cleo, python2-cleo, python-fake-factory, python2-fake-factory, ptpython): Likewise. * gnu/packages/rdf.scm (python-rdflib, python2-rdflib): Likewise. * gnu/packages/terminals.scm (asciinema): Likewise. * gnu/packages/version-control.scm (git-annex-remote-hubic): Likewise. * gnu/packages/xdisorg.scm (arandr): Likewise.
2016-11-15gnu: Remove python-setuptools and python2-setuptools from inputs (part 1b)Hartmut Goebel
This patch contains the changes in all modules beside python.scm where removing setuptools from the inputs could be achieved by removing complete lines. * gnu/packages/admin.scm (graphios, thefuck): Remove all [inputs], [native-inputs] and [propagated-inputs] where python-setuptools or python2-setuptools are the sole entries. Remove python-setuptools and python2-setuptools listed on a line by its own from [inputs], [native-inputs] and [propagated-inputs]. * gnu/packages/backup.scm (rdiff-backup): Likewise. * gnu/packages/bioinformatics.scm (htseq, macs, python2-pbcore, rseqc, multiqc): Likewise. * gnu/packages/django.scm (python-django, python2-django, python-django-simple-math-captcha, python2-django-simple-math-captcha): Likewise. * gnu/packages/docker.scm (python-docker-py, docker-compose): Likewise. * gnu/packages/game-development.scm (python-pygame): Likewise. * gnu/packages/key-mon.scm (key-mon): Likewise. * gnu/packages/mail.scm (khard): Likewise. * gnu/packages/music.scm (beets, python2-pyechonest): Likewise. * gnu/packages/openstack.scm (python-bandit, python2-bandit, python-debtcollector, python2-debtcollector, python-mox3, python2-mox3, python-os-client-config, python2-os-client-config, python-oslo.config, python2-oslo.config, python-oslo.context, python2-oslo.context, python-oslo.i18n, python2-oslo.i18n, python-oslo.serialization, python2-oslo.serialization, python-oslosphinx, python2-oslosphinx, python-oslotest, python2-oslotest, python-oslo.utils, python2-oslo.utils, python-swiftclient, python2-swiftclient): Likewise. * gnu/packages/pdf.scm (pdfposter): Likewise. * gnu/packages/tls.scm (python-acme, python2-acme): Likewise.
2016-10-31gnu: borg: Run the tests with python-pytest-2.9.2.Leo Famulari
* gnu/packages/backup.scm (borg)[native-inputs]: Use python-pytest-2.9.2.
2016-10-29Merge branch 'master' into core-updatesLeo Famulari
2016-10-29gnu: borg: Update to 1.0.8.Tobias Geerinckx-Rice
* gnu/packages/backup.scm (borg): Update to 1.0.8.
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