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path: root/gnu/packages/bioconductor.scm
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2019-03-15gnu: Add r-ioniser.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ioniser): New variable.
2019-03-13gnu: Add r-linnorm.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-linnorm): New variable.
2019-03-13gnu: Add r-illuminahumanmethylationepicmanifest.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-illuminahumanmethylationepicmanifest): New variable.
2019-03-13gnu: Add r-lumi.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-lumi): New variable.
2019-03-13gnu: Add r-methylumi.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-methylumi): New variable.
2019-03-13gnu: Add r-fdb-infiniummethylation-hg19.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-fdb-infiniummethylation-hg19): New variable.
2019-03-13gnu: Add r-minfi.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-minfi): New variable.
2019-03-13gnu: Add r-bumphunter.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-bumphunter): New variable.
2019-03-13gnu: Add r-siggenes.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-siggenes): New variable.
2019-03-13gnu: Add r-illuminaio.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-illuminaio): New variable.
2019-03-13gnu: Add r-geoquery.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-geoquery): New variable.
2019-03-13gnu: Add r-scone.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-scone): New variable.
2019-03-13gnu: Add r-scdd.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-scdd): New variable.
2019-03-13gnu: Add r-noiseq.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-noiseq): New variable.
2019-03-13gnu: Add r-monocle.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-monocle): New variable.
2019-03-13gnu: Add r-mast.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-mast): New variable.
2019-03-13gnu: Add r-icobra.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-icobra): New variable.
2019-03-13gnu: Add r-ihw.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ihw): New variable.
2019-03-13gnu: Add r-lpsymphony.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-lpsymphony): New variable.
2019-03-13gnu: Add r-ebseq.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ebseq): New variable.
2019-03-13gnu: Add r-nbpseq.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-nbpseq): New variable.
2019-03-12gnu: Add r-deds.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-deds): New variable.
2019-03-12gnu: r-qvalue: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-qvalue): Move from here... * gnu/packages/bioconductor.scm (r-qvalue): ...to here.
2019-03-12gnu: Add r-hsmmsinglecell.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-hsmmsinglecell): New variable.
2019-03-08gnu: r-genelendatabase: Update to 1.18.0.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-genelendatabase): Update to 1.18.0.
2019-03-06gnu: r-org-mm-eg-db: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-org-mm-eg-db): Move from here... * gnu/packages/bioconductor.scm (r-org-mm-eg-db): ...to here.
2019-03-06gnu: r-org-hs-eg-db: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-org-hs-eg-db): Move from here... * gnu/packages/bioconductor.scm (r-org-hs-eg-db): ...to here.
2019-03-06gnu: r-org-dm-eg-db: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-org-dm-eg-db): Move from here... * gnu/packages/bioconductor.scm (r-org-dm-eg-db): ...to here.
2019-03-06gnu: r-org-ce-eg-db: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-org-ce-eg-db): Move from here... * gnu/packages/bioconductor.scm (r-org-ce-eg-db): ...to here.
2019-03-06gnu: r-txdb-mmusculus-ucsc-mm10-knowngene: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-txdb-mmusculus-ucsc-mm10-knowngene): Move from here... * gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm10-knowngene): ...to here.
2019-03-06gnu: r-bsgenome-dmelanogaster-ucsc-dm3: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bsgenome-dmelanogaster-ucsc-dm3): Move from here... * gnu/packages/bioconductor.scm (r-bsgenome-dmelanogaster-ucsc-dm3): ...to here.
2019-03-06gnu: r-bsgenome-celegans-ucsc-ce10: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce10): Move from here... * gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce10): ...to here.
2019-03-06gnu: r-bsgenome-celegans-ucsc-ce6: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bsgenome-celegans-ucsc-ce6): Move from here... * gnu/packages/bioconductor.scm (r-bsgenome-celegans-ucsc-ce6): ...to here.
2019-03-06gnu: r-bsgenome-mmusculus-ucsc-mm10: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm10): Move from here... * gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm10): ...to here.
2019-03-06gnu: r-bsgenome-mmusculus-ucsc-mm9: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bsgenome-mmusculus-ucsc-mm9): Move from here... * gnu/packages/bioconductor.scm (r-bsgenome-mmusculus-ucsc-mm9): ...to here.
2019-03-06gnu: r-bsgenome-hsapiens-ucsc-hg19: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-ucsc-hg19): Move from here... * gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-ucsc-hg19): ...to here.
2019-03-06gnu: r-bsgenome-hsapiens-1000genomes-hs37d5: Move to (gnu packages ↵Ricardo Wurmus
bioconductor). * gnu/packages/bioinformatics.scm (r-bsgenome-hsapiens-1000genomes-hs37d5): Move from here... * gnu/packages/bioconductor.scm (r-bsgenome-hsapiens-1000genomes-hs37d5): ...to here.
2019-03-06gnu: r-txdb-hsapiens-ucsc-hg19-knowngene: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): Move from here... * gnu/packages/bioconductor.scm (r-txdb-hsapiens-ucsc-hg19-knowngene): ...to here.
2019-03-06gnu: r-geneplotter: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-geneplotter): Move from here... * gnu/packages/bioconductor.scm (r-geneplotter): ...to here.
2019-03-06gnu: r-copynumber: Move to (gnu packages bioconductor).Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-copynumber): Move from here... * gnu/packages/bioconductor.scm (r-copynumber): ...to here.
2019-03-06gnu: Update copyright headers.Ricardo Wurmus
This is a follow-up to commit 1fe9a36173335b559c695357bc8d884f1d4b144a. * gnu/packages/bioconductor.scm: Update copyright header to account for moved package.
2019-03-06gnu: Add r-org-dr-eg-db.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-org-dr-eg-db): New variable.
2019-03-04gnu: Add r-htscluster.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-htscluster): New variable.
2019-02-12gnu: Add r-dnacopy.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-dnacopy): New variable.
2019-01-13gnu: r-biocgenerics: Move to bioconductor.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biocgenerics): Move from here... * gnu/packages/bioconductor.scm (r-biocgenerics): ...to here.
2019-01-13gnu: r-annotate: Move to bioconductor.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-annotate): Move from here... * gnu/packages/bioconductor.scm (r-annotate): ...to here.
2019-01-12gnu: r-ruvseq: Update to 1.16.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-ruvseq): Update to 1.16.1.
2019-01-12gnu: r-inspect: Update to 1.12.1.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-inspect): Update to 1.12.1. [propagated-inputs]: Add r-deseq2, r-plgem, r-shiny, r-summarizedexperiment, and r-txdb-mmusculus-ucsc-mm9-knowngene.
2019-01-12gnu: Add r-txdb-mmusculus-ucsc-mm9-knowngene.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-txdb-mmusculus-ucsc-mm9-knowngene): New variable.
2019-01-12gnu: Add r-plgem.Ricardo Wurmus
* gnu/packages/bioconductor.scm (r-plgem): New variable.
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