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path: root/gnu/packages/bioinformatics.scm
AgeCommit message (Expand)Author
2022-05-09gnu: fastahack: Use compiler specific to the build target....Arun Isaac
2022-05-09gnu: fastahack: Use G-expressions....Arun Isaac
2022-05-09gnu: tabixpp: Fix cross-compilation....Arun Isaac
2022-05-09gnu: tabixpp: Use build tools specific to the target....Arun Isaac
2022-05-09gnu: tabixpp: Use #:make-flags....Arun Isaac
2022-05-09gnu: tabixpp: Use G-expressions....Arun Isaac
2022-05-06gnu: pigx-sars-cov-2: Update to 0.0.7....Ricardo Wurmus
2022-05-06gnu: Add pigx-sars-cov-2....Ricardo Wurmus
2022-05-02gnu: python-hic2cool: Fix build....Ricardo Wurmus
2022-05-02gnu: htslib-for-stringtie: Inherit from htslib-1.12....Ricardo Wurmus
2022-05-02gnu: python-cooler: Use more recent cytoolz....Ricardo Wurmus
2022-04-26gnu: Add r-giotto....Ricardo Wurmus
2022-04-19gnu: vcflib: Update to 1.0.3....Efraim Flashner
2022-04-14gnu: scregseg: Remove cythonized file....Efraim Flashner
2022-04-14gnu: r-chromvarmotifs: Move to (gnu packages bioinformatics)....Ricardo Wurmus
2022-04-11gnu: Add r-copykat....zimoun
2022-04-10gnu: smithwaterman: Fix cross-compiling....Efraim Flashner
2022-04-06gnu: Add r-rnaseqdtu....Hong Li
2022-04-05gnu: pigx-scrnaseq: Set NUMBA_CACHE_DIR....Ricardo Wurmus
2022-04-05gnu: pigx-scrnaseq: Use new inputs style....Ricardo Wurmus
2022-04-05gnu: pigx-scrnaseq: Update to 1.1.8....Ricardo Wurmus
2022-04-04gnu: freebayes: Fix test suite....Efraim Flashner
2022-04-04gnu: smithwaterman: Use new style for phases....Efraim Flashner
2022-04-04gnu: smithwaterman: Fix cross-compiling....Efraim Flashner
2022-03-31gnu: python-velocyto: Set cache directory for Numba....Ricardo Wurmus
2022-03-31gnu: wfmash: Enable test suite....Efraim Flashner
2022-03-31gnu: Add wfmash....Arun Isaac
2022-03-31gnu: htslib: Add bzip2 and xz to inputs....Arun Isaac
2022-03-31gnu: python-loompy: Update to 3.0.7....Ricardo Wurmus
2022-03-29gnu: r-signac: Update to 1.6.0-2.458e647....Mădălin Ionel Patrașcu
2022-03-29gnu: plink-ng: Update to 2.00a3-20220315....Ricardo Wurmus
2022-03-29gnu: Add r-cytobackbone....Mădălin Ionel Patrașcu
2022-03-29gnu: pigx-sars-cov2-ww: Update to 0.0.5....Ricardo Wurmus
2022-03-29gnu: pigx-rnaseq: Update to 0.0.20....Ricardo Wurmus
2022-03-09gnu: Add r-scopeloomr....Ricardo Wurmus
2022-03-02gnu: texlive-latex-pgf: Rename to "texlive-pgf"....Ludovic Courtès
2022-02-27gnu: minimap2: Update to 2.24....Efraim Flashner
2022-02-22gnu: Add r-dyngen....Ricardo Wurmus
2022-02-15gnu: python-gffutils: Update to 0.10.1....Marius Bakke
2022-01-31gnu: Add scvelo....Ricardo Wurmus
2022-01-31gnu: python-louvain-0.6: Update to 0.7.1....Ricardo Wurmus
2022-01-31gnu: bwa-meth: Remove trailing #T from build phase....Ricardo Wurmus
2022-01-31gnu: bwa-meth: Update to 0.2.3....Ricardo Wurmus
2022-01-27gnu: pigx-sars-cov2-ww: Fix Python module capture....Ricardo Wurmus
2022-01-27gnu: pigx-scrnaseq: Fix Python module capture....Ricardo Wurmus
2022-01-27gnu: pigx-bsseq: Fix Python module capture....Ricardo Wurmus
2022-01-27gnu: pigx-chipseq: Fix Python module capture....Ricardo Wurmus
2022-01-27gnu: pigx-rnaseq: Fix Python module capture....Ricardo Wurmus
2022-01-22gnu: cwltool: Update to 3.1.20220119140128....Marius Bakke
2022-01-22gnu: python-pyvcf: Build with old setuptools....Marius Bakke
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