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path: root/gnu/packages/bioinformatics.scm
AgeCommit message (Expand)Author
2021-05-15Merge branch 'master' into core-updatesLudovic Courtès
2021-05-14gnu: prinseq: Fix references to perl executable.Ricardo Wurmus
2021-05-09Merge branch 'master' into core-updatesMarius Bakke
2021-05-07gnu: Add ensembl-vep.Ricardo Wurmus
2021-05-06gnu: Add perl-bio-db-hts.Ricardo Wurmus
2021-05-05gnu: python-pybedtools: Update to 0.8.2.Ricardo Wurmus
2021-05-04gnu: r-summarizedexperiment: Move to (gnu packages bioconductor).Ricardo Wurmus
2021-05-04gnu: r-ensembldb: Update to 2.14.1.Ricardo Wurmus
2021-05-04gnu: r-gage: Update to 2.40.2.Ricardo Wurmus
2021-05-04gnu: r-annotationhub: Update to 2.22.1.Ricardo Wurmus
2021-04-30gnu: Add pbgzip.Roel Janssen
2021-04-29gnu: Update bedtools to 2.30.0.Roel Janssen
2021-04-29gnu: Update samtools to 1.12.Roel Janssen
2021-04-29gnu: Update bcftools to 1.12.Roel Janssen
2021-04-29gnu: htslib: Update to 1.12.Roel Janssen
2021-04-28gnu: pigx-bsseq: Update to 0.1.3.Ricardo Wurmus
2021-04-28gnu: Add lofreq.Ricardo Wurmus
2021-04-28gnu: kraken2: Replace references to rsync.Ricardo Wurmus
2021-04-28gnu: Add python-pyliftover.Ricardo Wurmus
2021-04-25gnu: Add python-louvain 0.15.Vinicius Monego
2021-04-23gnu: Add shorah.Ricardo Wurmus
2021-04-23gnu: Add r-shinycell.Ricardo Wurmus
2021-04-22gnu: Add kraken2.Ricardo Wurmus
2021-04-16gnu: Update blast+ to 2.11.0.Roel Janssen
2021-04-16Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner
2021-04-14gnu: cwltool: Update to 3.0.20210319143721.Arun Isaac
2021-04-14gnu: python-schema-salad: Update to 7.1.20210316164414.Arun Isaac
2021-04-10gnu: sortmerna: Mark up description.Tobias Geerinckx-Rice
2021-04-08gnu: r-genomicfeatures: Update to 1.42.3.Ricardo Wurmus
2021-03-31Revert "Revert some commits that caused `guix pull` to fail."zimoun
2021-03-31gnu: plink-ng: Build prettify binary.Efraim Flashner
2021-03-31gnu: plink-ng: Remove custom install phase.Efraim Flashner
2021-03-31gnu: plink-ng: Sort inputs alphabetically.Efraim Flashner
2021-03-31gnu: plink-ng: Update to 2.00a2.3.Efraim Flashner
2021-03-24Merge remote-tracking branch 'origin/master' into core-updatesEfraim Flashner
2021-03-22gnu: Add r-signac.Hong Li
2021-03-17gnu: Use PACKAGE/INHERIT in more places.Mark H Weaver
2021-03-16gnu: hisat2: Update to 2.2.1.Ricardo Wurmus
2021-03-15Revert some commits that caused `guix pull` to fail.Leo Famulari
2021-03-15gnu: r-delayedarray: Move to (gnu packages bioconductor).zimoun
2021-03-15gnu: r-rsamtools: Move to (gnu packages bioconductor).zimoun
2021-03-15gnu: r-biostrings: Move to (gnu packages bioconductor).zimoun
2021-03-15gnu: r-biocparallel: Move to (gnu packages bioconductor).zimoun
2021-03-15gnu: r-biomart: Move to (gnu packages bioconductor).zimoun
2021-03-15gnu: r-annotationdbi: Move to (gnu packages bioconductor).zimoun
2021-03-15gnu: r-biobase: Move to (gnu packages bioconductor).zimoun
2021-03-15gnu: r-genomicranges: Move to (gnu packages bioconductor).zimoun
2021-03-15gnu: r-xvector: Move to (gnu packages bioconductor).zimoun
2021-03-15gnu: r-limma: Move to (gnu packages bioconductor).zimoun
2021-03-15gnu: r-genomicfeatures: Update to 1.42.2.Ricardo Wurmus
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