summaryrefslogtreecommitdiff
path: root/gnu/packages/bioinformatics.scm
AgeCommit message (Collapse)Author
2020-06-13gnu: r-mzr: Update to 2.22.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-mzr): Update to 2.22.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-delayedmatrixstats: Update to 1.10.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-delayedmatrixstats): Update to 1.10.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-scran: Update to 1.16.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-scran): Update to 1.16.0. [propagated-inputs]: Add r-iranges. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-scater: Update to 1.16.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-scater): Update to 1.16.1. [propagated-inputs]: Add r-rlang. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-singlecellexperiment: Update to 1.10.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-singlecellexperiment): Update to 1.10.1. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-beachmat: Update to 2.4.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-beachmat): Update to 2.4.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-rhdf5lib: Update to 1.10.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rhdf5lib): Update to 1.10.0. [source]: Update snippet. [arguments]: Replace ZLIB variables in Makevars. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-hdf5array: Update to 1.16.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-hdf5array): Update to 1.16.0.
2020-06-13gnu: r-hitc: Update to 1.32.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-hitc): Update to 1.32.0.
2020-06-13gnu: r-fithic: Update to 1.14.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-fithic): Update to 1.14.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-sushi: Update to 1.26.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-sushi): Update to 1.26.0.
2020-06-13gnu: r-gwascat: Update to 2.20.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gwascat): Update to 2.20.1. [propagated-inputs]: Remove r-homo-sapiens; add r-ggplot2. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-gviz: Update to 1.32.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gviz): Update to 1.32.0. [propagated-inputs]: Add r-ensembldb. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-gqtlstats: Update to 1.20.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gqtlstats): Update to 1.20.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-ldblock: Update to 1.18.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-ldblock): Update to 1.18.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-erma: Update to 1.4.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-erma): Update to 1.4.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-snpstats: Update to 1.38.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-snpstats): Update to 1.38.0.
2020-06-13gnu: r-gqtlbase: Update to 1.20.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gqtlbase): Update to 1.20.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-ggbio: Update to 1.36.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-ggbio): Update to 1.36.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-biovizbase: Update to 1.36.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-biovizbase): Update to 1.36.0.
2020-06-13gnu: r-organismdbi: Update to 1.30.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-organismdbi): Update to 1.30.0.
2020-06-13gnu: r-ensembldb: Update to 2.12.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-ensembldb): Update to 2.12.1. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-dirichletmultinomial: Update to 1.30.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-dirichletmultinomial): Update to 1.30.0.
2020-06-13gnu: r-complexheatmap: Update to 2.4.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-complexheatmap): Update to 2.4.2. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-genomicfiles: Update to 1.24.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-genomicfiles): Update to 1.24.0.
2020-06-13gnu: r-gage: Update to 2.37.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-gage): Update to 2.37.0.
2020-06-13gnu: r-keggrest: Update to 1.28.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-keggrest): Update to 1.28.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-fastseg: Update to 1.34.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-fastseg): Update to 1.34.0.
2020-06-13gnu: r-annotationhub: Update to 2.20.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-annotationhub): Update to 2.20.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-interactivedisplaybase: Update to 1.26.3.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-interactivedisplaybase): Update to 1.26.3. [propagated-inputs]: Add r-dt. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-edaseq: Update to 2.22.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-edaseq): Update to 2.22.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-deseq: Update to 1.39.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-deseq): Update to 1.39.0.
2020-06-13gnu: r-aroma-light: Update to 3.18.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-aroma-light): Update to 3.18.0.
2020-06-13gnu: r-msnid: Update to 1.22.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-msnid): Update to 1.22.0.
2020-06-13gnu: r-msnbase: Update to 2.14.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-msnbase): Update to 2.14.2. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-pcamethods: Update to 1.80.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-pcamethods): Update to 1.80.0.
2020-06-13gnu: r-mzid: Update to 1.26.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-mzid): Update to 1.26.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-vsn: Update to 3.56.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-vsn): Update to 3.56.0.
2020-06-13gnu: r-affy: Update to 1.66.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-affy): Update to 1.66.0.
2020-06-13gnu: r-affyio: Update to 1.58.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-affyio): Update to 1.58.0.
2020-06-13gnu: r-protgenerics: Update to 1.20.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-protgenerics): Update to 1.20.0.
2020-06-13gnu: r-sva: Update to 3.36.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-sva): Update to 3.36.0. [propagated-inputs]: Add r-edger.
2020-06-13gnu: r-methylkit: Update to 1.14.2.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-methylkit): Update to 1.14.2.
2020-06-13gnu: r-copywriter: Update to 2.20.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-copywriter): Update to 2.20.0.
2020-06-13gnu: r-chipseq: Update to 1.38.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-chipseq): Update to 1.38.0.
2020-06-13gnu: r-annotationfilter: Update to 1.12.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-annotationfilter): Update to 1.12.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-rhdf5: Update to 2.32.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rhdf5): Update to 2.32.0. [native-inputs]: Add r-knitr.
2020-06-13gnu: r-tximport: Update to 1.16.1.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-tximport): Update to 1.16.1.
2020-06-13gnu: r-mutationalpatterns: Update to 2.0.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-mutationalpatterns): Update to 2.0.0.
2020-06-13gnu: r-rcas: Update to 1.14.0.Ricardo Wurmus
* gnu/packages/bioinformatics.scm (r-rcas): Update to 1.14.0. [propagated-inputs]: Remove r-annotationdbi, r-biomart, r-dbi, r-knitr, r-motifrg, r-org-hs-eg-db, and r-topgo; add r-bsgenome, r-gprofiler2, r-iranges, and r-ranger. [native-inputs]: Add r-knitr.
generated by cgit v1.2.3 (git 2.45.2) at 2024-07-29 10:05:05 +0000